| Id Trinity | TRINITY_DN52601_c1_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_464858 |
| Sequence | AACATGATGCTTCTCATATTAATATCTCTTACTTGAAGTGAATCAACCGCTATCATTCATTTCCACTTAGTTCGAAGCGCGAAGAAACACCTTCGCTACC AATACATTATTGTTTTCCTTCCAATTTCATCTCTCTTTTTCTCATCACACTTCCATCTCAAAATCAACCAGAAGAAGGAGTGGATCGAAGGATATGAGTA ACAGTGTGATATTACATCAAACCTTGCTTTATCAAAGTAAGGTGGTGAATTCTTGTGGCAACACTTTATTCCAACCGGCGAGTTTCAACAAAGGATCCAA GAAGAAGTTTCTGCTGTCTACGAATTTTCGCGGGAACAGGTTTTGTGTGAGGAAACTGAAACAAGCCATGGGAAAACACCAACATGGCTTCGTTATTCCT TGTGCTGTGTTAACCACCAATGCAGCTTCTGAAGAGCTTTCAAGGAGGTTCAACCTGGAAGGAAATATTGAGTTGCAGGTTGTTGTTAGCCCCTCAGCTC AAGGATCTGCACAAGTAGATATTCAGGTTTCAAATAGTAATGGCTCTCTCGTTTTACATTGGGGAGTTGTACATGATAGGCAAGGGTGGGTACTTCCTTC TCGATCCCCAGATGGAACTAAAACATATAAGAACAGAGCTCTTAGAACTCCTTTTGTGAAATCTGGTTCAGGATCCCTCCTTAAAATAGAAGTTGATGAT CCTGCTGCACAAGCCCTTGAGTTCCTTATACTTGATGAATCTCAGAATAAGTGGTTTAAAAACAATGGTGAAAACTTTCACATCAAGTTACCATCAAAAG ATAAGCGGGTTCAACAGGTTTCAGTTCCTGAAGAGCTTGTACAAATTCAAGCATATCTTAGGTGGGAACGGAAGGGTAAGCAGACATACACTCCAGAGCA AGAGAAGGAGGAATTTGAAGCTGCTCGACATGAACTATTAGATGAAGTAGCCCGGGGTACTTCCTTACAAGACCTCCATGCAAGGTTAACCAACAAAACT AATACCACTGAAGTCAAGGAGCCTACTGTTTATGAAACAAAGACCATCACGGATGAACTTGTGCAGATTCAAGCTTTTATACGCTGGGAGAAAGCTGGGA AGCCTAACTACTCTCCAGAACAGCAACTTATGGAATTTGAGGAAGCAAGAAAAGACTTGCTATCTGAGCTTGAGAAGGGAGCTTCCCTGGATGAGATACG GAAGAAGATTGCCAAAGGAGAGATACAAGCTAAAGTTGCCAAACAATTGAAAACCAAAGAACACTATCAAGTTCAAAGAATACAGAGAAAAAAGAGAGAT TTAACAAAGCTTATCAACAGAAATGTGGTGGAAGATGTAGTTGAACAATATATTGAATCTCCAAAGACCTTGACAGTAATTCAGAGTTATGCCAAGGCAA GGGAAGAGTATGATGGGAGTCTTGTTTTGAATAAGAAAATTCACAAGCTTGCTGATGGTGATCTCCTGGTCCTCGTTACTAAGGATGATGATAAGACAAA GGTCCACCTGGCAACAGACTCCAAAGTGCCTGTTACATTTCACTGGGCATTATCTAGAACACCCGGAGGTGGTGAGTGGTTGGTACCACCTGCCAGTGTT CTCCCCCCTGGTTCTGTTACTATGAAAGAGGCTGCTGAAACTCCTTTTAAAGCTGGTTCTTCATCTCACCCTTCTTATGAGGTCCAGACCTTAGACATAG AAGTTGAAGATGATACTTTTAAAGGAATGCCTTTTGTCATTCTGTCTGACGGAAAATGGATAAAGAACAATGGGTCAAACTTTTATATTGAATTTGGTGG GAAGAAGCAAATACAAAAGGATTTTGGTGATGCCAAAGGTACAGCCAAGACTTTGTTGGAAAAAATAGCGGAACTGGAAAGCGAGGCACAAAAGTCCTTC ATGCATAGATTTAACATTGCGTCAGATTTGATAGATGAAGCCAAAAATGCTGGTCAATTGGGTCTTGCAGGAATTTTGGTGTGGATGAGATTCATGGCTA CGAGACAGCTCATTTGGAACAAAAATTACAATGTGAAGCCACGTGAGATAAGTCAAGCACAGGATAGGCTTACAGACTTGCTTCAGGATCTGTATACTAG TTATCCACAGTATAGGGAACTTGTAAGGATGATCATGTCTACTGTTGGTCGTGGAGGTGAAGGTGATGTTGGGCAGCGGATTCGAGATGAAATCCTTGTT ATCCAGAGGAAGAACGATTGCAAGGGTGGAATGATGGAGGAGTGGCATCAGAAGTTGCACAATAATACTAGTCCTGATGATGTTGTAATTTGTCAGGCAT TGATTGACTATATAAATAATGACTTTGATATTGGTGTGTACTGGAAAACATTGAATGACAATGGAATAACTAAAGAACGTCTTCTGAGCTATGACCGTGC CATCCGTTCTGAACCAAAATTCAGGGGAGACCAGAAGGAAGGTCTTTTGCGTGATCTTGGAAGCTACATGAGGACTTTGAAGGCAGTCCATTCAGGGGCA GATCTTGAATCTGCTATTACAAATTGTATGGGTTACAAATCTGAGGGCCAGGGCTTCATGGTTGGCGTGAAGATAAATCCGGTGTCTGGTTTGCCTTCTG CTTTTCCTGAATTACTTCAGCTTGTGATGGAAAACATTGAAAATAAGAATGTTGAACCACTTCTCGAGGGCTTGCTAGAGGCTCGTCAGGAACTCCAACC ATCACTCCATAAGTCCCAAAGTCGTCTGAAAGATCTTTTATTTTTAGATATTGCGCTTGATTCTACGGTTAGAACAGCAGTGGAAAGGGGATACGAGGAG TTAAACAATGCTGGACCTGAGAAAATAATGTACTTCATCAACATGGTTCTTGAAAATCTTGCACTTTCATCAGATGACAATGAAGATCTTATCTACTGTT TGAAGGGATGGGATGTTGCCTTAAGCATGTGCAAGAGTAAAGATGCTCATTGGGCATTATATGCAAAATCAGTTCTTGACAGAACACGCCTTGCGCTCAC AAACAAGGCAGAGTCATACCAGCAAATTTTGCAACCATCGGCAGAATACCTTGGATCACTGCTTGGCGTGGACAGATGGGCTATCGAAATATTTACTGAA GAAATGATACGTGCTGGATCTGCTGCTTCTTTGTCTACTCTTCTTAATCGCCTGGATCCTGTACTCCGAGAGACAGCTAATCTTGGAAGCTGGCAGGTTA TTAGCCCAGTCGAAACCGTTGGATATGTAGAGGTTGTGGATGAGTTGCTTGCTGTTCAGAACAAATCATATGAGCGGCCTACAATTTTGGTAGTCAAGAG TGTGAAAGGAGAGGAAGAAATTCCAGATGGTGCAGTTGCTGTCCTGACACCTGATATGCCAGATGTCCTATCTCACGTGTCTGTGCGAGCAAGAAACAGC AAGGTGTGCTTCGCTACATGCTTTGATCCCAATATCCTAGCTGACCTCCAAGCAAATAAAGGAAAGTTGTTGCGCTTAAAACCCACATCAGCTGATGTAG TTTATAGTGAGGTCAAGGAGAGTGAGTTAATCGATGACAAATCAACTCACCTGCAAGAATTTGGTTCCGGGTCACCCATATCTTTGGTCAAAAAACAGTT TAGTGGGAGATATGCTGTCTCGTCTGAGGAATTCACTGTTGAAATGGTTGGAGCGAAATCTCGTAATATCTCTTATTTAAAAGGAAAAGTGCCTTCATGG GTTGGAATCCCCACCTCTGTTGCCTTACCATTTGGAGTTTTTGAACATGTCCTGTCTGATAAATCAAATCAGGCTGTGGCTGAGAAGGTCAATGTTCTGA AGAAGAAGTTAACTGAGGGAGATTTTAGTGCCCTCAAGGAGATTCGTGAAACAGTTTTACAGTTGAATGCACCATCCCAGTTGGTAGAGGAATTGAAGGT TACAATGAAGAATTCTGGAATGCCTTGGCCGGGTGATGATGGTGAACAACGCTGGGAGCAAGCATGGAAAGCTATAAAGAAGGTGTGGGGCTCCAAGTGG AATGAAAGGGCCTACTTCAGCACAAGAAAAGTGAAACTCGACCATGATTATCTTTCCATGGCTGTCCTTGTTCAGGAAGTGATAAATGCAGATTATGCTT TTGTCATCCACACAACTAATCCGTCCTCTGGGGACTCGTCAGAAATATATGCCGAGGTGGTTAAGGGACTTGGAGAAACACTGGTTGGAGCTTATCCAGG TCGTGCTTTGAGTTTTATCTGCAAAAAACATGATTTGAACTCTCCTCAGGTCTTGGGTTATCCTAGCAAACCTATTGGCCTATTTATAAGACGGTCAATT ATTTTTCGGTCTGATTCCAACGGTGAAGATCTAGAAGGTTATGCTGGTGCTGGCCTTTATGACAGTGTGCCCATGGATGAAGAGGACAAAGTAGTGCTTG ATTACTCATCTGATCAACTGATCATTGACGGTAATTTTCGGCAGTCGATCCTGTCAAGCATTGCTGGTGCAGGAAATGCAATTGAAGAGTTATATGGTTC TCCTCAGGACATTGAAGGTGTGATCAGGGATGGCAAAGTCTATGTTGTCCAGACAAGACCACAAATGTAAGCTTCTACCCCCATATCACCTAATCCACCT ACTTCAACTATGTCATCCATGTCCAACATGGCGCTTCAAACATGACTGAGGTAGATTCTGCTAGTTTGAGATTAAACCTGCAGATTACCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194059; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464858
| Blastp | Alpha-glucan water dikinase, chloroplastic from Citrus with 71.94% of identity |
|---|---|
| Blastx | Alpha-glucan water dikinase, chloroplastic from Citrus with 71.94% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423166.1) |
| Pfam | Pyruvate phosphate dikinase, PEP/pyruvate binding domain (PF01326.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |