Id Trinity | TRINITY_DN52601_c1_g2_i3 |
---|---|
Name Transcript | Ll_transcript_464847 |
Sequence | AACATGATGCTTCTCATATTAATATCTCTTACTTGAAGTGAATCAACCGCTATCATTCATTCACACTCAGTTCAAACCCTGAAGAATCATCTTCGCAATT TTCCTCTTCGTTTTCCTTTCGATTTCGATTCTCTTCACATTTTTCTCATCACATTTCGATCGAAGAAAAACGGAGCGGATCGAAGGATTATGAGTAACAG TGTGAGCCATAGTATCATTCACCAAACTTTGATTTATCAAAGTAAGGTGGTGAATTCTTGTAGCAACAGATTAGCATCGAAGAAGAAGCTTCTGCTTTCA ACCAATTTTCGCGGGAACAGGTTTTGTGTGAAGAAACTGAAGGAAAAGCATCAGCAACATCGATTTGTTAATCCGTGTGCTGTGTTAACAAGTAATGCGG CTTCTGAAGATCTTTCAGGGAAGTTCAATCTTGAAGGAAATCTCGAGTTGCAGGTTGTTGCCAGTTACTCAGCTCCAGGAGCTGCACGACAAGTAGATAT TCAGGTTTCAAATAGTAGTGGCTCTCTGGTTTTGCATTGGGGAGTTGTACATGATAGGCAAGGGTGGGTGCTTCCTTCTCGTTCCCCAGATGGAACTAAA GTTTATAAGAACAGAGCTCTTAGAACTCCTTTTGTGAAATCCGGCTCAGGATCCTTCCTTAAAATAGATGTTGATGATCCTGCTGCAAAAGCTGTTGAGT TCCTTATACTTGATGAATCTCAGAATAAGTGGTTTAAAAACAATGGTGAGAACTTTCACATCAAGTTACCGGTAAAACATAAGCTAGCTCAACAGGTTTC AGTTCCTGAAGACCTTGTACAAGTTCAAGCATATATTAGGTGGGAACGAAAGGGTAAGCAGATGTACACTCCAGAGCAAGAGAAGGTCAGTAATCGAGTG TTCATGTGTTTCATATTCCATTTAGCTTCGAATCTTCAAGTTTGCTTCCTACTTCGATTTGTTCAGTTAATTCTTCTTCGATTTCCCGGTTTTTCCATTT AGTTTGTTTTTCTCTCCAATTTCATTTCAATATTGCTTTTTTGATTCACCTTTGAAGAATGTATTACATTTTTTTTAATTATAGCAGGGGTACATGTTCT TGATTATGCATGCCACAGTAACCTTTGGCACTCATTAGCTGTGTAAATTCTTCCATAGTAACCTTCTGGTGCTATCCTTATTTAAGTTGGTTCTGAGATC CTTTTCAATGTGCTTTAAAACTCTATCTGATATGTTTGGTTTTAGCTTCCATGAAATAGGTAGTCAGAAGCTTTGACCTGTGGTGGAGAATGAAACTACC AGAAGCAGCATCCCTTTCTTCACTAACATGACATAGAAATAAGAATATTATTTCCGTGTGCCTGTTGAATAGGCACTTACCCTGTAAATTCCTTCTATTC TTGATTTTTTTCAAAGTAAGCTTTGAACATCCACACATTATAGCATGATAACCACTCTAAAAAAGGATAATTGTGTTAGAGATTGATTATTAAATTAATG TTTCTACTACCTTTAGTTTCGTAATGAAATAATCAATTGTTAGAACATGAATACCTTTTTATATTGGTTATTTATTTATGAAGTGTGATTATGTTGAATC AGACAGTTTTATATAATGAAGGAAAAAAAATAGAGACTTAGAGTTATATGTGATTGATATTGATACTTACATGATGATCAGAGAAATGGCTAGTAGCCTA GTACAGTGATGTCGTTCTTTTGTGGTTGTTGGAATTTGATAGACCTGTGAGCTTGAAATATTTCAATTTTAAAGTTGGAACTAATACAGTTTGTCTGCCA TACCCAAGACATGTATATGATTTTCCCCTCTACCATGTTAGGAGGAATATGAAGCTGCTCGACGTGAACTATTAGAGGAAGTAACTAGGGGTACTTCTGT ACAAGACCTCCGTGCTAGGCTGACTAACAAAACGAATGCCACTGAAGTTAAGGAGCCTACTGTTTATGAACCAAAGACCATCCCTGATGAACTTGTACAG ACTCAAGCTTTTATACGTTGGGAGAAAGCTGGGAAGCCTAACTACTCTCCAGAAGAACAACTTATGGAATTTGAGGAAGCAAGAAAAGACTTGCTATCTG AGCTTGAGAAGGGAGCTTCCCTGGATGAGATACGGAAGAAGATTGCCAAAGGAGAGATACAAGCTAAAGTTGCCAAACAATTGAAAACCAAAGAACACTA TCAAGTTCAAAGAATACAGAGAAAAAAGAGAGATTTAACAAAGCTTATCAACAGAAATGTGGTGGAAGATGTAGTTGAACAATATATTGAATCTCCAAAG ACCTTGACAGTAATTCAGAGTTATGCCAAGGCAAGGGAAGAGTATGATGGGAGTCTTGTTTTGAATAAGAAAATTCACAAGCTTGGTAATGGTGATCTCC TGGTCCTCGTTACTAAGGATGATGATAAGACACATGTTCATCTGGCTACAGACTCCAAAGTGCCTGTTACATTTCACTGGGCATTAACTAGAACACCAGG AGGTGGAGAGTGGTTGGTACCACCTGCAAATGCTCTACCCCCGGGATCTATTACTATGGAAGGGGCTGCTGAAACTCCTTTTAAAGCTGGTTCTTCATCT CACCCTTCTTATGAGGTCCAGACCTTAGACATAGAAGTTGAAGATGATACTTTTAAAGGAATACCTTTTGTCATTCTGTCAGGTGGAAAATGGATAAAGA ACAATGGGTCAAACTTTTATATTGAATTTGGTGGGAAGAAGCAAATACAAAAGGATTTTGGTGATGCCAAAGGTACAGCAAAGGGTTTGTTGGATAAAAT AGCAGAAGCGGAAAGTGAGGCACAAAAGTCCTTCATGCATAGATTTAACATTGCGTCGGGTTTGATAGATGAAGCCAAAAATGCTGGTCAATTGGGTCTT GCAGGAATTTTGGTGTGGATGAGATTCATGGCTACAAGGCAGCTCATATGGAACAAAAATTACAATGTGAAGCCACGTGAGATAAGTAAAGCACAGGACA GGCTTACAGACTTGCTCCAAGATGTTTATACAAGTTATCCACAGTATCGGGAGCTTGTGAGGATGATCATGTCTACTGTTGGTCGTGGAGGTGAAGGTGA TGTGGGACAGCGGATTCGAGATGAAATCCTTGTTATCCAGAGGAATAACGATTTGGGTGGAATGATGGAGGAGTGGCATCAGAAGTTGCACAATAATACT AGTCCTGATGATGTTATAATCTGTCAGGCACTGATTGATTATATAAGTAGCGACTTCGATATTGGTGTGTACTGGAAAACATTGAATGACAACGGAATAA CAAAAGAACGTCTTCTGAGCTATGACCGTGCTATCCATTCTGAACCAAACTTCGGGAGAGATCAGAAGGAAGGCCTTTTGCGTGATTTAGGACACTACAT GAAGACTTTGAAGGCAGTTCATTCAGGTGCAGATCTTGAATCTGCTATTACAAATTGTATGGGTTACAAATCTGAGGGCCAGGGCTTCATGGTTGGCGTG AAGATAAATCCGGTGTCTGGTTTGCCTTCTGCTTTTCCTGAATTACTTCAGCTTGTGATGGAAAACATTGAAAATAAGAATGTTGAACCACTTCTCGAGG GCTTGCTAGAGGCTCGTCAGGAACTCCAACCATCACTCCATAAGTCCCAAAGTCGTCTGAAAGATCTTTTATTTTTAGATATTGCGCTTGATTCTACGGT TAGAACAGCAGTGGAAAGGGGATACGAGGAGTTAAACAATGCTGGACCTGAGAAAATAATGTACTTCATCAACATGGTTCTTGAAAATCTTGCACTTTCA TCAGATGACAATGAAGATCTTATCTACTGTTTGAAGGGATGGGATGTTGCCTTAAGCATGTGCAAGAGTAAAGATGCTCATTGGGCATTATATGCAAAAT CAGTTCTTGACAGAACACGCCTTGCGCTCACAAACAAGGCAGAGTCATACCAGCAAATTTTGCAACCATCGGCAGAATACCTTGGATCACTGCTTGGCGT GGACAGATGGGCTATCGAAATATTTACTGAAGAAATGATACGTGCTGGATCTGCTGCTTCTTTGTCTACTCTTCTTAATCGCCTGGATCCTGTACTCCGA GAGACAGCTAATCTTGGAAGCTGGCAGGTTATTAGCCCAGTCGAAACCGTTGGATATGTAGAGGTTGTGGATGAGTTGCTTGCTGTTCAGAACAAATCAT ATGAGCGGCCTACAATTTTGGTAGTCAAGAGTGTGAAAGGAGAGGAAGAAATTCCAGATGGTGCAGTTGCTGTCCTGACACCTGATATGCCAGATGTCCT ATCTCACGTGTCTGTGCGAGCAAGAAACAGCAAGGTGTGCTTCGCTACATGCTTTGATCCCAATATCCTAGCTGACCTCCAAGCAAATAAAGGAAAGTTG TTGCGCTTAAAACCATCATCAGCTGATGTTGTTTATAGTGAGGTCAAGGAGAGTGAGCTTATCGATGACAAATCTACTCTCCTTCAAGAAAATGGTGCTG GGTTACCCATATCTTTGGTCAAAAAGCAGTTTATTGGGAGATATGCTGTCTCGTCTGACGAATTCACTGGTGAAACGGTTGGAGCCAAATCACGAAATAT CTCTTATTTAAAAGGAAAAGTTCCCTCTTGGATTGGAATTCCCACCTCCGTTGCCTTACCATTTGGAGTTTTTGAACATGTCCTTTCTGATAAATCAAAT CAGGCTGTGGCTGAGAAGGTCAATGTTCTAAAAAGGAAGTTAATTGAGGGAGATTTTAGTGCCCTCA BLAST |
Tissue | pods |
Gene name | LI_gene_194059; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464847
Blastp | Alpha-glucan water dikinase, chloroplastic from Citrus with 72.68% of identity |
---|---|
Blastx | Alpha-glucan water dikinase, chloroplastic from Citrus with 71.77% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421634.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |