Ll_transcript_464416

• Id Trinity: TRINITY_DN52602_c2_g2_i20
• Name Transcript: Ll_transcript_464416
• Sequence: CTTGTCCTTGAATTCAATCTCCTCTTTCCATTTCTCTTACACAATTCAGATTTCTATTTCTCTTTCTAGGTTTTGTTTTGGGTTTTCTTTCGCGCGATTC ACCCTTCAAGATTTTGGATTCGTGATCACATCAATGAGTGAGCGTAAGACTATTGACTTGGAACAAGGATGGGATTTTATGCACAAAGGAATCACCAAGC TCAAGAACATTCTAGAAGGCCTTCCTGAGCCTCAGTTCAGCTCCGAGGACTATATGATGCTTTACACAACCATCTACAACATGTGCACTCAAAAGCCCCC TCATGATTATTCCCAACAACTTTATGACAAGTACAGGGAGTCTTTTGAAGAGTACATTTTATCAACTGTGTTACCTTCTTTGAGAGAGAAGCATGATGAG TTTATGTTGAGAGAACTTGTGAAGAGGTGGGCAAACCATAAAATTATGGTGAGGTGGCTTTCTCGTTTCTTTCACTATTTGGATCGCTACTTTATTGCTC GGAGGTCACTGCCACCCCTCAATGAAGTTGGACTGACTTGCTTCCGTGACTTGGTAAACCTTACATCTGTTAGCTATATTCATGTTATAAAGAAAGACAA GCTTTGAAGTGCTATTATTATTTTGATGGTTTTCCTGTTATTGTCATTACATTTTTATGCTGCCTCTATGAAATAAATTGATTTTACAGGTTTACAAGGA ACTAAATGGGAAAGTGAGAGATGCAGTTATTTCTCTTATTGATCAAGAACGTGAGGGAGAGCAGATCGATCGAGCTCTATTAAAGAATGTGTTAGGTATA TTTGTTGAAATTGGAATGGGGCAAATGGATCATTATGAAAATGATTTTGAAGCTGTCATGCTGAAAGACACCTCTGCTTATTATTCTCGGAAGGCTTCAA ATTGGATCTTAGAAGATTCTTGTCCTGATTATATGCTTAAGGCTGAGGAATGCTTAAAACGGGAGAAAGATAGGGTTGCTCATTACTTACACTCTAGCAG TGAGCCAAAGTTACTTGAGAAAGTTCAACATGAGCTGTTATCAGTATATGCAAACCAACTCCTTGAGAAAGAGCACTCTGGATGTCATGCATTGCTCAGG GATGACAAGGTTGAAGATTTGTCAAGAATGTTCAGGCTATTTTCTAAGACACCTCGAGGCTTAGATCCTATTTCGAGTATATTTAAGCAGCATGTTACCA CTGAAGGTATGGCACTGGTGAAGCTTGCTGAAGATGCAGCTAGTAACAAAAAGCCAGATAAAAAGGATATCGTTGGTCTGCAAGAGCAGGTTTTTGTTCG GAAAGTAATTGAGCTGCATGATAAGTACCTGACATTTGTGAATGATTGTTTCCAGAATCATACTCTTTTCCACAAGGCACTTAAGGAAGCTTTTGAGATC TTTTGTAACAAGGGTGTTGCTGGAAGCTCAAGTGCGGAACTGCTTGCCACTTTTTGTGATAACATTCTTAAGAAAGGGGGAAGTGAAAAATTGAGCGATG AAGCAATTGAAGAAACTCTTGAAAAGGTGGTTAAGCTGCTCGCTTATATTAGCGACAAAGACTTGTTTGCTGAATTCTATAGGAAGAAGCTTGCCCGAAG GCTTTTATTTGACAAGAGTGCCAATGATGACCATGAGAGAAGCATTTTGACAAAATTAAAGCAACAATGTGGTGGACAGTTTACTTCAAAGATGGAAGGA ATGGTTACAGATTTGACACTGGCTAAGGAGAATCAAACTAGCTTTGAGGAGTATTTAAGTAATAATACTGCAGACCCTGGGATAGACTTGACTGTTACCG TTCTAACAACTGGCTTCTGGCCTAGTTACAAATCGTTTGATCTCAATCTTCCGGCAGAAATGGTTAGGTGCGTTGAAGTTTTCAAGGAGTTTTATCAAAC TAAAACAAAGCACAGAAAACTCACATGGATCTACTCCTTGGGTACCTGTAATATAATTGGGAAATTTGAGCCAAAAACTGTGGAACTGATTGTCACAACC TACCAGGCTTCAGCATTACTGCTTTTTAATTCTGCAGATAGGCTGAGTTATTCAGAGATAATGACTCAGTTAAACTTATCAGATGATGATGTTATTAGAT TGCTTCACTCCTTGTCATGTGCCAAGTACAAGGTTCTTACCAAGGAACCAAACACGAAAACAATATCTTCTACTGATAATTTTGAATTCAATTCAAAGTT TACCGACAAAATGAGGAGAATCAAGATTCCTCTCCCTCCTGTGGATGAGAAGAAAAAAGTAATTGAAGATGTTGACAAGGACAGAAGATATGCTATTGAT GCCTCAATTGTGCGCATTATGAAGAGTCGGAAAGTTTTGTCTTACCAGCAGTTGGTTGTTGAGTGTGTTGAACAGTTAGGTCGTATGTTTAAGCCTGATG TCAAGGCCATTAAGAAGCGGATTGAAGATTTGATTTCTCGAGACTACTTGGAAAGAGAGAAAGATAATGCAAATATGTTCAGGTACTTGGCATGATGGGG TCTTGGTGATTGTGAAAAGGAAGTGGTTACTGCAGATAGCAAATGTGCAGATCATGTTCGACCATGCAAAAAATCGGTTCCTTAATTTCCTTTATGGGAT GAGCTGTTGGGTGCTTGTACATTTTGCCTCTATATTCAAGTATGGACTACTATTGTAGATGTGTGATCATGTTGGAGAAGTTGTAATCACTCCATGAGTA TGTCCAGCTCAACTGATTCATCCACTTTCTTTTCACTTTTGTTTGCTGCATGTCCATCTCTGTATGCTGATTATTTCTCCCACCCCATAAAGGAATTAGG CATTCTGTTACTCTATGTTTCAGTGCAGTTTATTGTATTGGATTCTCGGCTTAGAAATCATCAAATGAATCACTTATTTGAATCCAAACCCTATAGCTAT GATGTTTTTATATATATTGTGTTTATAAGAATCTTTCACTGGCATTCATTTTGTAGTCACATCTGATCTTATATGAGAAGGTCCCATTATTATGTTAGAT GCATTTGTTTTTTAAAGGTTTGGCATGTGTTTTAAATGCCATTTCTATTGACATGGTTTATTGTTGAGTACAACGACTATGCGATTAATGATTAATGCAT ATAGTTGATATTATCGAAAAACACTATTGTTGATTCTGGATGTCCAACAGAAAATCGTTATCTGTTCTGATACTTGAAATATAGTCTGCGATGTGGACAA TTTATATAATTGAGGGCATGAATTGCATTTGCATCTTGGGGAT
• Tissue: pods
• Gene name: LI_gene_194070;
• Additional information: details;

Expression of Ll_transcript_464416

FPKM

• PAB: 1.2
• PNAB: 0.5
• PS1: 0.6
• PS2: 0.7
• PS3: 0.5
• PW1: 0.7
• PW2: 1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_464416

• Blastp: Cullin-1 from Arabidopsis with 80.89% of identity
• Blastx: Cullin-1 from Arabidopsis with 77.64% of identity
• Eggnog: cullin 1(COG5647)
• Kegg: Link to kegg annotations (AT4G02570)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450940.1)
• Pfam: Cullin family (PF00888.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;