| Id Trinity | TRINITY_DN52602_c2_g2_i21 |
|---|---|
| Name Transcript | Ll_transcript_464417 |
| Sequence | TATTGATTAAGCCGTGATATTTAATACCCGAATGGATGATTGTTCTCTTCGTTCGGGAGTTCACTTATTTCCCTGTCCTTGATTTTCTCCTTTTCCCCAC ACCAACCATTTCTAGGGTTTCTTTTCATCTACCATCTGCACGATTTCATCATCAATCCACGATTTTGGTACCTGGGCTTGAAATTTAGTTTTCCAAGATG TCTCTGAGTGAGCGCAAGACTATTGACCTGGAACAAGGATGGGATTTTATGCAGAAGGGCATAATGAAATTGAAGAACATTCTAGAAGGGCTGCCCGAGC CTCAGTTCAGCTCTGAGGATTATATGATGTTATATACGACCATATACAATATGTGCACTCAAAAGCCTCCCCATGATTATTCCCAACAATTGTATGACAA ATACAGGGAATCGTTTGAAGAGTACATCATATCAACTGTATTACCCTCTTTGAGAGAGAAGCATGATGAATATATGTTGAGAGAACTTGTGAAGAGGTGG GCAAACCATAAAATTATGGTGAGGTGGCTTTCTCGTTTCTTTCACTATTTGGATCGCTACTTTATTGCTCGGAGGTCACTGCCACCCCTCAATGAAGTTG GACTGACTTGCTTCCGTGACTTGGTTTACAAGGAACTAAATGGGAAAGTGAGAGATGCAGTTATTTCTCTTATTGATCAAGAACGTGAGGGAGAGCAGAT CGATCGAGCTCTATTAAAGAATGTGTTAGGTATATTTGTTGAAATTGGAATGGGGCAAATGGATCATTATGAGAATGATTTTGAAGCTGTCATGCTCAAA GACACTTCTGCATATTATTCTCGAAAGGCTTCAAATTGGATCCTAGAAGACTCTTGTCCTGATTATATGCTTAAGGCTGAGGAGTGCTTAAAACGAGAGA AAGATAGGGTTGCTCATTACTTACACTCTAGCAGTGAGCCAAAGTTATTAGAGAAAGTTCAACATGAGTTGTTATTTGTGTATGAAAACCAACTCCTCGA GAAAGAGCACTCTGGATGTCATGCATTGCTCAGGGATGACAAGGTTGAAGATTTGTCAAGAATGTTCAGGCTATTTTCTAAGACACCTCGAGGCTTAGAT CCTATTTCGAGTATATTTAAGCAGCATGTTACCACTGAAGGTATGGCACTGGTGAAGCTTGCTGAAGATGCAGCTAGTAACAAAAAGCCAGATAAAAAGG ATATCGTTGGTCTGCAAGAGCAGGTTTTTGTTCGGAAAGTAATTGAGCTGCATGATAAGTACCTGACATTTGTGAATGATTGTTTCCAGAATCATACTCT TTTCCACAAGGCACTTAAGGAAGCTTTTGAGATCTTTTGTAACAAGGGTGTTGCTGGAAGCTCAAGTGCGGAACTGCTTGCCACTTTTTGTGATAACATT CTTAAGAAAGGGGGAAGTGAAAAATTGAGCGATGAAGCAATTGAAGAAACTCTTGAAAAGGTGGTTAAGCTGCTCGCTTATATTAGCGACAAAGACTTGT TTGCTGAATTCTATAGGTAAAATAAAAGAGAAGAGGATGTTTTGTGTGGTGATAAATTGGTTTTATATGCTGGTCAAAAAGGATTTGATTTTGCAATTTT TGTTGTTGTATCAGCTTATTCATGATAATTGCTGCTATTGTTTCTTGGTGGTTCATAAGAATTTACTATTTTTAGAGATATGATACCAATCTTGGGCAAT CACGGGAGTTGAATCTTGGCTACCCCAATTCCTTTGGCTGAATTTTGGCACAAGGAAGAAGCTTGCTCGAAGGCTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_194070; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464417
| Blastp | Cullin-1 from Arabidopsis with 81.42% of identity |
|---|---|
| Blastx | Cullin-1 from Arabidopsis with 81.42% of identity |
| Eggnog | cullin 1(COG5647) |
| Kegg | Link to kegg annotations (AT4G02570) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425796.1) |
| Pfam | Cullin family (PF00888.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |