Id Trinity | TRINITY_DN52603_c0_g1_i3 |
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Name Transcript | Ll_transcript_462967 |
Sequence | AAATTTCCTAGAACATGCTGATAGAAAAATAGAAGACTAGCGAACTAAAAAAAGCCAAAAGCAAAAGCAAAAATCTCGATTCTGATTTTTTCAAAATCTG ATTCTCATTCTGAAAAACACTAACTCTATTTAAATCTCCTTGATCTATTTTGAAGAAGAGTCATTGGTTCAGTTACTAATAGGAACTGTTGAAACTTGAA AGAAACTGATTTTTTTCTTCTTCTTATTATGCATTGATTTTAAGCTATAATAGTAATCCAAAGCTTACGGTGCCATCTCTCCTGCGACAGTTATCGGAAA AAATGAGTAACGGTTTCGCGAACGGTTCTTCGCCTCGCCGCCGGCGACCTGAAAATGATATTGAAGCTGGTATTCCGAGTAACCGCTCCGGCGACTTTGC CGACGCCGATTTGGCTGATCCATTTGATATTACCAGCACTAAGAATGCATCGTTTGAACGACTCAAGCGTTGGAGACAAGCGGCTCTTGTGCTTAATGCT TCTCGTCGATTTCGTTACACTCTGGACTTGAAAAAAGAAGAGGAGAAGAAGCAAGTATTGAGAAAGATAAGAGCACATGCACAAGCCATTAGGGCAGCAC ACCTGTTCAAAGCAGCAGCAGTGCCTGTGGGGCAGGCGAATGAAACCGTAAAACCTCCTTCGACCTCAACCGGTGAATTTCCAATTGGACAAGAGCAACT TGCTTCCATTTCAAGGGATCATGATACGATTGCTCTGCAACAATATGGAGGGGTTGCAGGGATATCAGATTTGTTGAAAACCGATTTAGAGAAGGGTGTT CATGATGATGAGGCTGAGTTACTGAAACGGAGGAACACATTTGGTTCCAACAATTATCCCCGAAAGAAGGGAAGAAACTTTTTGATGTTTTTGTGGGATG CTTGCAAGGATCTGACCTTGATTATTTTAATAGTAGCTGCTGCGGCTTCATTGGCACTGGGGATAAAATCTGAGGGAATTAAGGAAGGATGGTATGATGG GGGAAGCATTGCTTTTGCA BLAST |
Tissue | pods |
Gene name | LI_gene_194073; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_462967
Blastp | Calcium-transporting ATPase 10, plasma membrane-type from Arabidopsis with 65% of identity |
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Blastx | Calcium-transporting ATPase 10, plasma membrane-type from Arabidopsis with 64.58% of identity |
Eggnog | ATPase, Ca transporting, plasma membrane(ENOG410XNNC) |
Kegg | Link to kegg annotations (AT4G29900) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431135.1) |
Pfam | Ca2+-ATPase N terminal autoinhibitory domain (PF12515.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |