| Id Trinity | TRINITY_DN52603_c1_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_462988 |
| Sequence | CGAAAAAAAGGGAGAAGTTTCTGGAGGTTTTTATGGGAAGCCTGGCAAGATCTGACTCTTATAATATTGATTATAGCAGCTGTAGTATCACTGGTACTTG GAATAAAAACAGAGGGTTTGGAAGAAGGATGGTACGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCG GCAATCTCTGCAATTTAAGAATTTGAATGCAGAAAAACAAAATATACAATTGGAGGTCATTAGAGGTGGCAGAACAATTAAAATCTCAATATTTGATATT GTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTGTTAATCACTGGCCATTCACTTGCTATTGATGAATCCAGTATGA CTGGTGAAAGCAAGATTGTTCACAAGGATCACAAATCACCCTTTATGATGTCTGGTTGCAAAGTAGCAGACGGAGTTGGTTCTATGCTGGTAACCGGTGT TGGCATCAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATACAGGAGAAGAGACTCCGTTACAGGTACGATTGAATGGAGTAGCAACTTTT ATTGGCATAGTTGGACTTACTGTAGCTGTTCTTGTGCTTACTGTCCTCTTGGGAAGATACTTTTCCGGCCATACGAAAGATTTAGATGGAAATGTGCAAT TTGTTGCTGGAAGGACTAGTATTAGTGATGCAGTAGACGGGGTCATCAAAATTTTTACCATTGCAGTCACAATTGTGGTTGTTGCAGTGCCGGAAGGCTT ACCTTTAGCTGTTACCTTAACCTTGGCATACTCCATGCGCAAAATGATGGCAGACAAAGCCTTGGTGCGAAGGCTGTCGGCTTGTGAAACTATGGGCTCA GCTACAACAATTTGCAGTGATAAGACTGGAACTTTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAGGAAGAAACTAAATCCACCAGATG ATTCGTCAACGATGCATCCAGAAGCTTTATCTCTGATAAATGAGGGCATTGCACAAAATACAACTGGCAATGTTTTTGTGCCCAAGGATGGTGGGGAGAC AGAGGTGACAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATCTTACCAGATCAAATACGACAGTTCTCCAT GTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCCCTGAAGCTGGTGAACTCAGGAGTACATATTCATTGGAAAGGAGCTGCAGAGATTGTTC TAAAAGCATGTACTCAGTATCTTGATTCAAATGGTGACTTGCAATCCATTGAAGAAGAGAAGGCATTTTTCGGGGAGGCGATTGATGACATGGCTGCTCG CAGCCTGCGTTGTGTTGCCATTGCATACAGATCATATGAATTAGACAAAGTTCCATCTAATGAGGAGGAATTGGACCAGTGGTCCTTACCAGAAGAAGAG CTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAAGAGGCTGTGAGAGTATGCACTGATGCCGGTGTTAAGGTACGCATGG TTACTGGAGACAACCTTCAGACAGCAAAGGCAATAGCTCTGGAGTGCGGGATACTGTCTTCAATTGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAA GACTTTCCGTGAACTACCTGAAAAAGAAAGGGAACAGATTGCTAAGAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAA GCACTACGTAAGGGAGGTGAAGTTGTTGCTGTGACTGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTGCTATGGGCATTG CAGGAACTGAAGTTGCAAAAGAAAGCTCGGATATTATAATCTTGGATGATAACTTTGCATCTGTAGTAAAGGTTGTCCGCTGGGGTCGATCTGTATATGC GAACATTCAGAAATTTATTCAGTTCCAGCTCACTGTTAACGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAAGTTCTGGTGATGTTCCTTTAAAT GCAGTACAGCTTTTGTGGGTCAATCTTATCATGGACACACTTGGGGCCCTTGCACTTGCTACAGAACCACCAACAGACCAGCTAATGAACAGATTGCCAG TTGGCCGAAGGGAACCTCTTATTACTAACATCATGTGGAGAAACTTGCTTGTACAGGTAAATTAGTTTATAGATAGACTTGTTAAGGTCATCATGAAATT AGGAATGAGGGTCCTTGGGTCTAGGTCCCATCATGAAATGATATTATTTGACATTGCAGGCTGCCTA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194075; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_462988
| Blastp | Calcium-transporting ATPase 9, plasma membrane-type from Arabidopsis with 82.98% of identity |
|---|---|
| Blastx | Calcium-transporting ATPase 9, plasma membrane-type from Arabidopsis with 81.27% of identity |
| Eggnog | ATPase, Ca transporting, plasma membrane(ENOG410XNNC) |
| Kegg | Link to kegg annotations (AT3G21180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426879.1) |
| Pfam | Cation transporter/ATPase, N-terminus (PF00690.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |