Ll_transcript_462989

• Id Trinity: TRINITY_DN52603_c1_g1_i17
• Name Transcript: Ll_transcript_462989
• Sequence: CGAAAAAAAGGGAGAAGTTTCTGGAGGTTTTTATGGGAAGCCTGGCAAGATCTGACTCTTATAATATTGATTATAGCAGCTGTAGTATCACTGGTACTTG GAATAAAAACAGAGGGTTTGGAAGAAGGATGGTACGATGGGGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCG GCAATCTCTGCAATTTAAGAATTTGAATGCAGAAAAACAAAATATACAATTGGAGGTCATTAGAGGTGGCAGAACAATTAAAATCTCAATATTTGATATT GTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTGTTAATCACTGGCCATTCACTTGCTATTGATGAATCCAGTATGA CTGGTGAAAGCAAGATTGTTCACAAGGATCACAAATCACCCTTTATGATGTCTGGTTGCAAAGTAGCAGACGGAGTTGGTGTTATGCTGGTAACCAGCGT TGGTATAAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGATACGGGAGAAGAGACTCCATTGCAGGTACGTTTGAATGGAGTGGCAACTTTT ATTGGAGTAGTTGGGCTTAGTGTTGCAGTTTTAGTGCTCGCTGTCCTCTTGGGCAGATTCTTTTCTGGCAACACACAAGACTTGGATGGAAAAACACAAT TCACCGCTGGGAAGACTAGTATTAGTGATGCAGTAGACGGGGTCATCAAAATTTTTACCATTGCAGTCACAATTGTGGTTGTTGCAGTGCCGGAAGGCTT ACCTTTAGCTGTTACCTTAACCTTGGCATACTCCATGCGCAAAATGATGGCAGACAAAGCCTTGGTGCGAAGGCTGTCGGCTTGTGAAACTATGGGCTCA GCTACAACAATTTGCAGTGATAAGACTGGAACTTTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAGGAAGAAACTAAATCCACCAGATG ATTCGTCAACGATGCATCCAGAAGCTTTATCTCTGATAAATGAGGGCATTGCACAAAATACAACTGGCAATGTTTTTGTGCCCAAGGATGGTGGGGAGAC AGAGGTGACAGGATCTCCTACAGAGAAGGCAATTCTTTCATGGGCGATGAAGTTGGGGATGAAATTTGATGTTATCAGAAAAACTTCAACAATTCTCCAT GTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTCTGAAGCTGGTGGACTCTGAAGTACATATTCATTGGAAAGGAGCGGCAGAGATTGTTC TAGGAGCATGTACTCAGTATCTTGATTCAAATGGTGACTTGCAATCCATTGAAAAAGAGAAGGCATTTTTCAGGGAGGCGATTGATGACATGGCTGCTCG CAGCCTGCGTTGTGTTGCCATTGCATACAGATCATATGAATTAGACAAAGTTCCATCTAATGAGGAGGAATTGGACCAGTGGTCCTTACCAGAAGAAGAG CTTGTTTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAAGAGGCTGTGAGAGTATGCACTGATGCCGGTGTTAAGGTACGCATGG TTACTGGAGACAACCTTCAGACAGCAAAGGCAATAGCTCTGGAGTGCGGGATACTGTCTTCAATTGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAA GACTTTCCGTGAACTACCTGAAAAAGAAAGGGAACAGATTGCTAAGAAAATAACGGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAA GCACTACGTAAGGGAGGTGAAGTTGTTGCTGTGACTGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTGCTATGGGCATTG CAGGAACTGAAGTTGCAAAAGAAAGCTCGGATATTATAATCTTGGATGATAACTTTGCATCTGTAGTAAAGGTTGTCCGCTGGGGTCGATCTGTATATGC GAACATTCAGAAATTTATTCAGTTCCAGCTCACTGTTAACGTTGCTGCTCTTGTAATAAATGTTGTGGCAGCAATAAGTTCTGGTGATGTTCCTTTAAAT GCAGTACAGGTGCCCCTCTCTTTCTTCTCTCAAGTTTTTATTTTGACTGACTTCTTCCTTTACACTTTAAAACCTTATAAAGTAGATGACAGGGTGAAAA ATAAGCAGAGAATTGGACCGTGTCAGATTTTGTTGGCCACAGAATTATTAGCATTTTTTTGTTTCTATTTTTCATTAATTCTAATCAAGTTTTCACGATT TTCTTTCTAATTTATTGATGTGGTGTTGGTCTGAATAGAAAAATGTACTAAATAGCCATTGCCAACTCCAAAATTGGTTGCACTTCCTGATTGTTATAGA AATAAGGTGTGTAACTTGTGCCCGTTGAGTTTGTTTCGAAGGTTTTGTTATAGATAGGCTGCTAGTGGGTAAGACTTTAGGATTCTAGTTCAGTTTGTTC TTTGCTGACAATTTTTCTATAGGGATATGGATAAGAGTTGTTCAATATATGTATCCATTAATAAATTTCCAGAATAGAATTCCATGTGAGTGTTGTTTTT ATTATTGTAGTTTAGATATAGTTACTGTTCTGTAAGAACTAAGTCTGGTGTATTACTGCGGAAGGGAATGATTAAAATCATAAACAATTAAAGTGTATAA TGTCTTTGATATGCATGCTCTTGGGTACAGCTTTTGTGGGTCAATCTTATCATGGACACACTTGGGGCCCTTGCACTTGCTACAGAACCACCAACAGACC AGCTAATGAACAGATTGCCAGTTGGCCGAAGGGAACCTCTTATTACTAACATCATGTGGAGAAACTTGCTTGTACAGGCTGCCTACCAAGTTGCTATTCT TCTAGTTCTTAAGTTCAGTGGTGAAAGTATTCTACCTAAACAAGATACTAGAGCTCATGATGTTCAAGTGAAGAATACTTTAATTTTCAATGCATTCGTC ATGTGCCAAATATTCAATGAGTTCAATGCTCGGAAACCAGAAGAAATGAATGTCTTCCGAGGAGTAACGAAGAACAAACTCTTCATGGGAATTGTTGGAG TGACCTTTATACTTCAGATAATCATCATTGAGTTCCTTGGAAAGTTCACCTCAACAGTGAGGCTTGATTGGAAGCTGTGGCTTGCTTCTCTTATTATGGG CGTTGTCAGTTGGCCTCTTGCTGTAGCTGGAAAATTCATTCCAGTTCCGAAAACACCATTGTCCCGATTTGTCTTGAGGCCACTTCGGCGATTGAGAAGG TCTCGTGCTGCCGCAGCACAACAGTAGGTCAACAGACCAGCAAGAAGAAGTGGATAAAACCTTATAGCAATGGTACAAAAGATGCTTCATATAAAGCGAA CAACGCCTTTGACAAGTAACAGCATTACATATTGCTAGTCCATCTTCCTGAATCCTTCATTCTAGCATTTGAATATAAATGTATATTCATCATATATAGC AATATTATCATTATGAGATATGAGATATCCCCATGGGATTTAAACATAAAAGCATTCATTATTTGATATGCCTCTATCTCGTTTTTCCTTTGTTAACATT TTTGGATCAAGTGTACATTGTAGCATTTCTTGAGATTCTTAGAGTTACTACTCTATAAATGCTATCGAACTGACTTTCTAGCATTGCCAAGCTCCATTTC TCCAAAATTTCGAAATGAAAAGAAACCATTGCAACGGTTAACTATTCATATTCAGTTCCAG
• Tissue: pods
• Gene name: LI_gene_194075;
• Additional information: details;

Expression of Ll_transcript_462989

FPKM

• PAB: 4.5
• PNAB: 7.1
• PS1: 5.1
• PS2: 4
• PS3: 5
• PW1: 11.5
• PW2: 9.7
• PW3: 13.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462989

• Blastp: Calcium-transporting ATPase 9, plasma membrane-type from Arabidopsis with 82.95% of identity
• Blastx: Calcium-transporting ATPase 9, plasma membrane-type from Arabidopsis with 82.95% of identity
• Eggnog: ATPase, Ca transporting, plasma membrane(ENOG410XNNC)
• Kegg: Link to kegg annotations (AT3G21180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426879.1)
• Pfam: Cation transporter/ATPase, N-terminus (PF00690.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;