| Id Trinity | TRINITY_DN52605_c7_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_465151 |
| Sequence | AAAAGGGTTTCTCACAATCGGGTCGGAGCAACCCGAATCAAAACATTCAAACCACTCAACCTGCGTATTCCAAAACGGGTTCCACGAACCCGAATGGAAG TTATTCTTCTTCGATGCTATCCACGGCGAGAAAGAGGAATTATGAGCAGTGTTGGCGAGGAACAAAGAGCTTGACCTACGAAGAGGTTATGGAGAGGGGA GCTAAGGGTTTATGCTTCAAGTGTAGGGGAAAGTACCACCCCACACAACACAAATGCCTAGAATGTGCTTTACGCTTGTTGATTTTTGGGGAAGGTGAAA CCGTGGAGGAAGAAGGTGAGATTATCGCGATAGAAACTTGTGAGGTTGACGAAGATGATGATGCAGAGGCTGAATGTAAAGTGCTTGGAGTCATGGGTCA TATGGGTGAATATCATACCATGAAATTGGAAGGTCGTCTAGAAGGTATTGAAATTTTGGTGTTAATCGATAGTGGAGCTAGCCATAATTTCATCTCTCCC GCAATTACAACAGCATTAGGGCTCAAGATTATTCCTATGCAACACGCACTATCAAACTCGGTGATGGTCACAAAATTGTTTCTAAAGGAATTTGTAAAGG GCTTCAAATCAACATGGGTTCACATACTTTCGAAGTGGATGTTATGGTTATGGAGTTAGGGGGTCTGGATGTGGTGTTCGAAGTATCATGGTTGAGTACG TTGGGGAAAGTTATAATGGACTGGAAACACCTTACTATGCAATTCTGCCATAAAGGTATCGTGGTGAATCTCCAAAGCCATGGAAGTAGTATGGGCAGTC ACGGTTTCCTCAATTCCTTTTTAGAGGGAAGTCAAAATGAACAAGAATGGTGGTGGACATTAAGGAGGAAGGAGGACAGTGTGATGGTGGAGGAAGGACA GCAACAAGTTTCTCGGCTCTTAAATAAATTTTCAGCAGTGTTTCAAGAGCATATCAGTTTACCTGCGAAGAGAAATCACGTTCATTATATTCAGTTATTT GCAGGTTCAGGACCAGTGAATGTTTGACCTTACAAATATCCCCATCATCAAAAAGATGAGATTGAAAAACAGGTTCGGGAGTTGTTGGCGGTGGGAGTTA TCCGACCTAGTGTTAGTGCTTTCTCAAGCCCAGTGATTTTAGTGAAGAAGAAGGATGGGTTGTGGCGTATGTGTGTTGATTATTGGGCCTTGAATAAAGC AACAATTCCAGATAAATATTCGATTTCGATTGTGGACGAGTTGTTGGATGATCTATTTGGGTCAACATTTTTTTCCAAGGTTGACTTGCGCTCGGGGTAT CATCATATTCGTGTTCATGAAGCTGATATTTAAAAAACAGCGTTTCGAACACATAATAGACACTATATATACCTTGTTATGCCTTTTGGGTTGATGAATG TTCCGGCAACTTTCCAAGCAACTATGAATGATGTCTTTCGATCTTTTCTTCGTAATTTTGTTTTGGTATTCTTTGATGATATTTTGGTGTATAGCAGGAA TGAGGAGGAACATGTGCATCACTTACATCAAGTGTTACGAGTGCTGCAGGACCATTGTTTTGTTGATAATAAAAACAAGTGCAATTTTGGATGCCGCAGT GTCCATTATCTGGGTCATATGATTTGGGGAAATGGAGTAGCGGTGGATCCAGAAAAGGTGAAGTGTGTAGTGGAGTGGCTGAAGCCTAAGACTGATAAGG GAGTACGTGGTTTTCTCGGTCTCACGGGCTACTATAGAAAGTTCATCCGTGACTATGGTAAGATTACCAAACTGTTGACTGAGCTCACTAAGAAGGACAA TTTTTTGCAGAGTTCTTCTGCATTGGAGGCTTTCAATAGGCTGTAATAGTTAATGACTACTTCTCCTGTATTACTTTTGCCTGATTTTACATTCCCTTTC GAGGTTGAATGTGATGCGGCAAGAAGAGGCATTGGTGCAGTTCTCATGCAAAAGAAACAACCAATTGCTTTTTTTCAGCAAGGCTATGTTGGAGGGATAC TTGTCTAAGTCGGTGTATGAGAAAGAACTGATGGCATTGGTCCTTGCTATTCAGCATTGGAGACACTATTTGTTGGGAAAATTATTTGTGGTTTATACGG ATCACAAAAGCTTGAAATATTTTCTGCAACAAAGAGTTTCTTCCCCGGATCAAAAATGTTGGTTGGCAAAGCTATTGAGGTATCACTTTGAGGTCAAGTA CAAACCAGGACCAGAAAATACGGCTACCGATGCTTTATCTAGATGCCATGACGAAGCCGAGTTGGCTGCCATGGTATCCTATCCTACGTGGGAGGATGCT GGAAAATTATTAGACGAGGTAAAAAGGGATGCGGTCATACAAGCCATTGTGGAGGAGGTAAAGGCGGATCCAACTGCAAAGAAGGGGTACACCGTTCAAT AAGACACGTTGTTTTATCAGGGACGTCTGGTGATTTCACCAACTTCCTCGGTTATTCCTTTGATTCTAAGAGAATTTCATGCGACCCCGATGGGTGGTCA TTCGGGCTTTTTGAGGACATATAGGAGGATTGCAGCAAATCTCTATTGGCCGAGAATGCAAAGGGTGATCCGTGACTTTGTGCGGGCATGTGATACATGT CAACGACAAAAGAATGACGCAACTACTCCGGGGGGTCTCCTTCAACTTCTGCCCATTCTGAATTCTATCTAGGAGGATGTCTCACTAGTCTTTGTTACAG GTCTCCCTAGATCTAAGGGGTTTGATGTCGTCTTGGTTGTGGTGGACCGTCTTTCGAAATATAGTCATTTTCTGTTGTTGAAACACCCTTATACAGCTAA AACCATGGTTGAATTGTTCGTGAAAGAAATAATACGGTTGCATGGTATTCCTATGACTTTGTTAAGTGATCGCGATCCTTTATTTGTAAGTCATTTTTGG ATGGAACTATTTAAAATGCAGGGCACACAGTTGAAGATGAGTTCTGCATATCATCCTGAAACGGATGGGAAAATGGAGGTGATTAACAGGTGCTTAGAGA GCTATCTCTGTTGTTTTGCATCTGATCAACCAAAGACATGGTCGTATTGGATTTCGTGGGCGGAGTTTTTGGTACAACTACTTTTCATGTTTCCATAGGC ACTACCCCTTTTGAGGTGGTTTATGGGCGACCTCCGCCTCCCATTATGCGTTTTCTTAGCAACGAGACCAAGGTGGCAGCCGTGGCACTAGAATTGAGTG AACGGAATTTAGCATTGAGTCAACTTAAACTTCACTTATTACGAGCACAACAACAAATGGTGAAGTATGCATATAAGGGAAGGCGAACTGTGCATTTTGA AGTGGGTGAGTGAGCCTTTTTGAAACTACGGCCCCATCATCAACAATCCTTGATGAAGAGAATTAACCAAAAGTTGGTTGCACGTTTCTATGGTCCGTTT CAAATCCTTGCCAAACGAGGCGAAGTGGCCTACAAGCTTTTATTACCAGAATACTCTAAAATACATCTGGTATTTCATGTTTCTCTGCTTAAGAAAACTA TTGGTGATTATCAAACTCATGGGGATCTTCCGAAAGAATTAAGCATTGATACGGCTAATGATGTGTATCCGGAAAAGGTCCTTGGGTCGCGTTGGATTAC ACAAGCAGGTGTTTCGGTTCCTCAAAGTCTTATTCAATGGAAAAACAAATCGGTGGAGGATGTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_194091; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465151
| Blastp | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 36.13% of identity |
|---|---|
| Blastx | Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 38.44% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014632080.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |