| Id Trinity | TRINITY_DN52606_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_463827 |
| Sequence | AAAAAACCCGGTAGTTTCAAACCGATGCAGTTTCCGCGCTTTTGCTTCACTTTCTGAGAGCAGCTCCATCTTCATTCTTCATTCTCCAATCTTCAATTCA ATGGCCACTCTTCCCACTTTCATAACCTCTAACCAACAACACGATCCTCTCTTACCCTTTCTACGGTCTGTCAAGAAAGCTCTAGAAGGTTCCAGCGCTT CTGATTCCGATCTCAGTAAATTACTACTAAATTGCATCACAAGTTTCAAACACAGTGACCAGTATCGAAATGATGTTAGATTTCTTAAGATTTGGCTCCT CTATATGGGTGTTAGTGCAGATTTTGATACTGTTTTCAAAGAAATGCTGGATAGCAAAGTATGCGTCAATGATTCTTCACTTTATGTGTGGTCTGCTTCT TTTTTCGAATTAAAGGGAAGATTGCGTGATGCCCTCACAATCTATCAGCTTGGCATTTCCAGGAATGCAGAGCCAATTGAGTGGTTGAAGAAAGCACACA CCTTATTTCTCAGTAGAATTTCAGAAATACGGAATGCTGCTTCTAGTCAGAAGATTGATGATAAAGAGCACATGAAATTGGGGAACATTGACATTAATCC ATGGGACACCTCCACAATGAATGATCTATTGAAGAAGATAGATCCTTTAATTGCAAAAGTTGATGGGTATTATTCAAGCACAAAATCTTACGGGGGAAAA GTAGCCTTATCTACTTTGAAGAATTCATCAAGGAATAAAGTTATAGAGATAGGTGGAAACAAGTACCATATCAAGGGTTGTGCTGGACAGGGTGGTTTTG CTCAAGTATATAAAGCATATGTCAATGGTGATCCTGATGATCTTGTTGCACTAAAGATACAAAAGCCACCTTTCCCTTGGGAATTTTACATGTATCGTCA GCTTGATCAACGAATTTTAGGCAGAGAAAGGTTAAGCTATGGTTTGGCTCATAGAGTTCATCTCTACTCTGATTGTAGCATACTAATATGTGATTATTTA GCTCATGGGACGCTACAGGATGCCATAAACTCATATGCGGTCATAGGAAAATCCATGGAAGAAGTGCTATGTATTTATTACACTATAGAAATGTTACACA TGGTTGAAACAATGCATGATGCTGGCTTGATTCATGGTGATTTCAAGCCTGATAATCTGCTTATTCGCTATGCTAGGGGTGACCTCACAGAAGATGGTTT CTTGGACCGAAGTGATTCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGGAGAGGGATTGATCTGCATCTCTTTCCAGATAACACAATGTTTAAA GGAGATTGCAGAACTTCTGGTTTTCGCTGCATTGAAATGCAAGAGGATAAGCCATGGAAATTTCAGGCAAGCCATTTCTAGAATTACACTCCAAATGCAA TGATGTTCACTATTGACTGCATTTAAAGGTCCCTTCTTTATCAATGGCCAACAGGTAGACACATATGGCCTTTGTGTTGTTGTCCATATGATGTTACACA ATTGTTATATGGAGGTTGTCAAGAAAGAATCATCTGATGGGGGCTCCGTGTATCTTCCCAGGCTACCCTTTAAACGTTACTGGAACATTGAGCTGTGGAA GACTTTCTTCACTAAGATGCTAAATCAATACCCTGGCAATGATGATAGAAGGTTGCTGCAAGAGTTGAAGAAGTCCTTCCAAGATTATATGAACTCTAAT CCCCAGCTTGTGAAGAAACTAAAGGAGTTACTAGCCAAGCAAAGGGCTTCCTTGTGTTCTGCCTAGTGCTTTGAGATCATCACATATCCACTTCCATATT CCATTAGTCGACCACTGTGCTAATCTTATTGTGTAGGTAGCTGGGCGATTCTCTGGAATTTGACCTTTGGGTGTACATAGATTTGTAAATGCAGAGTGTT GTATGCAGTTAAGACAGTTTTATATTGTAACGTGTTCATTATCATTAAGAAGTGTATCATATGCAAAAAGCTACACAGCATATATGAATGCTTCTGAGTT GTTTAAAAAGCTCCAAATATTTTGGTTAACTTATATGACACTTGGATAAGTTAAGTGCTATATCACTGCACTGGACAGCATATATAAATGATGTTTCAGT TAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194098; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_463827
| Blastp | Mitotic checkpoint serine/threonine-protein kinase BUB1 from Arabidopsis with 59.62% of identity |
|---|---|
| Blastx | Mitotic checkpoint serine/threonine-protein kinase BUB1 from Arabidopsis with 59.13% of identity |
| Eggnog | Budding uninhibited by benzimidazoles 1 homolog(ENOG410XQ67) |
| Kegg | Link to kegg annotations (AT2G20635) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453707.1) |
| Pfam | Mad3/BUB1 homology region 1 (PF08311.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |