Ll_transcript_463852

• Id Trinity: TRINITY_DN52606_c1_g3_i11
• Name Transcript: Ll_transcript_463852
• Sequence: TCGTTGCGCAGCGTTGGCCACAAACAATCAAATAAAAGACATAGAATAAATAGAAGAGAAGAAACAAAATAATTTGTTAACGGGGTTCGGCCAACTGTGC CTACGTCCCCGGGAGCTTTGAACGGCTACCAAGATATTATTAAAGAATAAGGATTACAAGCCCTAACACACCCATGGGCACGCCCAAGTGTCTATGGGGT GCTTCTATCTGTTGCTTATATCTGGTGCCCATTATAACAAGTACATGAGTAAAATATATAACATTGATTACTGTAATCTATTCCAATACTAGGTAATGTG TGACTAATACAATGATTCAAGTATCCCCAACATATATATTCTGGTTAAAACAATGTATGAGCTATACAGATATGTGCTACCATATGCATTTGCTCACAAC ATTAATTTATGTTCCAATTGATGCCTTTTATGTGGCAAATGAAGCCTTGTGCTATGGAATTACCTCATATATGACCATGAATGATGCTTCGAACTTGTTG CGGAAAATCATATCACACGAGCCATCCTCCAATAAATTTTTGCTCGAAATAACTTGTCTGTTGAATTTGTCGAAGGTTGCCAATGAAAAAGTTGTGGTTC GGGATTCCAGTGGAAAGGAAATCCAATCACAGCTGCTACCAATACTTGATGAGTTTCTTGGTGTAAGAAACTACCACACCAAGGCATACCTGGGAGTGTC TTCAACTGTAAACCCCAAATACTGGCTTGCATTTTCGGCAACAGTTCCGGCACTTGGTTTTAGCACTTACTATGTTTCCAAGGCCAAACAACCAGCTACT ATTTCAGATACAAATACAGCATACAAGTCACGGAATCAGAGTGATACAATTAAAGTGGGCATAGGAAACTTGAAACTAATTTATTCTAAAAAGGAAGGAA AACTTACTCAATATATCAACAGCAGAAGCAAGGTAAAAGAATCTGTAGAGCAAGCATACAAATTTTATGCCGGGTATGGAGATGATGGAACACAAAATGC TCAGGCGTCTGGAGCGTATGTTTTTCGTCCCAATGGTTCGTCATCTCCCATTAAATCCCACAGGGAGTCTCCTCTCACAGTCTTTCAGGGACCAATTGTG CATGAAGTGCATCAGAAGATCAATTCATGGATATACCAGATCACCAGACTGTACAAGGGGAAAGAGCATGCTGAAGTTGAGTTTATTGTTGGACCTATAC CCATTAATGATGGAGTTGGCAAGGAAATTGCAACTGAGATTAAAACAAATCTGGCAAGCAAGAAAAAATTCTATACTGATTCCAATGGGCGCGATTTTAT TGAACGGATTCGAGACTACAGAAAAGATTGGGACTTGGAAGTAAATCAGCCTGTTGCTGGAAATTATTACCCTATCAATCTCGGGATTTACCTAAAAGAC GAAAGTAAAGAATTCTCTGTTTTGGTAGATAGATCTGTGGGCGGCGCTAGCGTCGTAGATGGGCAATTGGAACTAATGGTTCATCGGAGGTTACTTGTGG ACGATGGTAGAGGTGTTGCAGAGGCACTGAATGAAACGGTTTGCGTCCATGATAAGTGCACTGGATTAACTATATTAGGAAAGTACTATTTCAGAATCGA TCCTGTGGGAGAGGGTGCGAGATGGCGCCGATCATTTGGTCAGGAGATATACTCACCGTTACTTTTAGCCTTCACCGAGAGTGAAGGTAGCTGGGGAGAT TCTCATGTCACAGCCTTCTCCGGACTGGATTCCTCATACAACTTACCCGACAATGTCGCAATAATAACCCTCCAGGATCAGGGTGATGGAGAAGTTCTAC TCCGGCTGGCTCACTTATATGAGATTTTCGAGGACGCGCAACTTTCGGCTGTGGCAACTGTAGAGCTTAAAAAGGTGTTCCCCAAGAAACAGATAAACAA AGTAAGTGAGGTGAGCTTATCAGCTAACCAAGAAAGAGCAGAAATGGAGAGGAAGAGATTAGTCTGGCAAGTCGAAGGGTTACCCCAAAATCGCAAACTT CTAAGGGGAAGACCCGTAGATCCCGAAAAGCTATTTGTAGAACTTCATCCTGCAGAAATAAGGACCTTTATTATCAGTTTTAGGCAGTAAAGGTCCACTA GGACACTGATGAAAAATAAGCAATGTACTCAGAAATGTCCATTTCAATAAAGTTTATTGTTTCTCACTTTCTTTAGTCATCCCTTGACATCTAATCAAGT TTTATGATATCACTTTTTCTGTATCTTTGGTTTGTATTTCTTCAAAACAATATGTTAGTAGTGTCTTTTGTTTAGGAGAAAATGGAATCCTCGAGAGTCA ATCTCTGGCTCACTTCCTATCAATTATAACTTAC
• Tissue: pods
• Gene name: LI_gene_194100;
• Additional information: details;

Expression of Ll_transcript_463852

FPKM

• PAB: 1.4
• PNAB: 5.2
• PS1: 0.7
• PS2: 1.1
• PS3: 0.7
• PW1: 2.9
• PW2: 2.9
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_463852

• Blastp: Probable alpha-mannosidase At5g13980 from Arabidopsis with 56.42% of identity
• Blastx: Probable alpha-mannosidase At5g13980 from Arabidopsis with 56.42% of identity
• Eggnog: Mannosidase alpha class(ENOG410XQMZ)
• Kegg: Link to kegg annotations (AT5G13980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430110.1)
• Pfam: Glycosyl hydrolases family 38 C-terminal domain (PF07748.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;