| Id Trinity | TRINITY_DN52606_c1_g3_i12 |
|---|---|
| Name Transcript | Ll_transcript_463853 |
| Sequence | CTAAAACTGACACTAACATAATATTATTCTATTCACCTAACGACAACTATGAGGGTCCATGTGTTTATAATTTCTATATTACAAATAACCCCATCATGTT TATAACTCCATCTTCTTCTTTTTCTACACACTTCGTTCCATGGTCACTTCAATGGAAAGTGGTGAATGTATCTTGGTTTTAGTTTTAGTGTTGGTGGGGT GTTTTGTTTCCACAGAATCTAAGTACATAAGGTACAATACTACTTCAACTATTGTTCCTGGTAAGCTCAATGTTCATTTGGTTCCTCATACTCATGATGA TGTTGGATGGTTGAAGACCATTGACCAGTACTATGTTGGCTCCAACAACTCCATTCAGGGAGCGTGTGTCCAAAATGTGCTGGATTCATTGGTACCGGCA TTGTTGGCTGACAAAAATCGCAAATTCATATATGTTGAACAGGCATTTTTCCAGCGTTGGTGGAGAGAACAGAGTGAGGTTGTCCAGAACACAGTGAAGC AGCTGGTCAATTCTGGTCAATTGGAGTTCATAAATGGTGGAATGTGTATGCATGATGAGGCTACCACACACTATATTGACATGATTGATCAGACAACCCT TGGACACCAATTTCTCAAAGAAGAATTCGGTGTAACTCCGAGAATTGGGTGGCAAATTGATCCATTTGGGCATTCTGCAGTGCAGGCTTACTTGTTGGGA GCAGAGGTTGGATTTGACTCTCTATTCTTTGCGCGGATTGACTACCAAGACAGAGCTAAGAGGAAAGACGAAAAAACTCTTGAAGTTGTATGGCAGGGCT CTAAGAGCCTCGGTTATACTGCACAAATATTTTCTGGTGCATTCCCTAATAATTATGAACCTCCCACCAGTAATTTCTACTTTGAAGTTAATGATGATTC TCCTGTTGTCCAGGATGATGTCGATTTGTTTGACTACAATGTCCCTGATCGCGTAAATGAGTTTGTCTCAGCCGCAATAGCACAGGCCAATATTACACGC ACAAATCATATAATGTGGACAATGGGGACAGATTTCAAGTACCAATATGCACATACCTGGTTTCGGCAAATGGACAAGTTTATTCACTATGTTAATCAAG ATGCACGAGTTCATGCCCTATACTCGACCCCGTCAATATATACCGATGCAAAGCATGCTGCAAATGAGGCCTGGCCTCTCAAGACCGATGACTTCTTTCC GTACGCTGATCGTATAAATGCCTATTGGACGGGATATTTTACGAGTAGGCCGGCTCTCAAAGGTTATGCCAGATTGATGAGCAGCTACTATTTGGCAGCA AGGCAGTTGGAGTATTTCAAAGGGAAGAGTGTTTCGGGTCCTAAAACCGACTCTTTGGCTGAAGCTTTGGCTATTGCTCAACACCACGATGCAGTATCCG GGACATCAAAGCAGCATGTCGCTAATGATTATGCAAAACGACTTTCAATAGGCTACACAGAGGCTGAGAAGGTTGTTGCGGAGTCACTTGCTTACTTAAC AGATGCAGCAACCAAAACTGATTCTAGGAGTTCACAAATTAAATTTCAACAGTGTCCACTTCTGAACATAACTTACTGTTCGGCATCTGAAGTCGACCTC TCATATGGGAAAGACCTGGTTGTTGTGATTTACAATCCACTAGGATGGAAAAGAGATGATGTTATAAGGATTCCTGTTGCCAATGAAAAAGTTGTGGTTC GGGATTCCAGTGGAAAGGAAATCCAATCACAGCTGCTACCAATACTTGATGAGTTTCTTGGTGTAAGAAACTACCACACCAAGGCATACCTGGGAGTGTC TTCAACTGTAAACCCCAAATACTGGCTTGCATTTTCGGCAACAGTTCCGGCACTTGGTTTTAGCACTTACTATGTTTCCAAGGCCAAACAACCAGATACA AATACAGCATACAAGTCACGGAATCAGAGTGATACAATTAAAGTGGGCATAGGAAACTTGAAACTAATTTATTCTAAAAAGGAAGGAAAACTTACTCAAT ATATCAACAGCAGAAGCAAGGTAAAAGAATCTGTAGAGCAAGCATACAAATTTTATGCCGGGTATGGAGATGATGGAACACAAAATGCTCAGGCGTCTGG AGCGTATGTTTTTCGTCCCAATGGTTCGTCATCTCCCATTAAATCCCACAGGGAGTCTCCTCTCACAGTCTTTCAGGGACCAATTGTGCATGAAGTGCAT CAGAAGATCAATTCATGGATATACCAGATCACCAGACTGTACAAGGGGAAAGAGCATGCTGAAGTTGAGTTTATTGTTGGACCTATACCCATTAATGATG GAGTTGGCAAGGAAATTGCAACTGAGATTAAAACAAATCTGGCAAGCAAGAAAAAATTCTATACTGATTCCAATGGGCGCGATTTTATTGAACGGATTCG AGACTACAGAAAAGATTGGGACTTGGAAGTAAATCAGCCTGTTGCTGGAAATTATTACCCTATCAATCTCGGGATTTACCTAAAAGACGAAAGTAAAGAA TTCTCTGTTTTGGTAGATAGATCTGTGGGCGGCGCTAGCGTCGTAGATGGGCAATTGGAACTAATGGTTCATCGGAGGTTACTTGTGGACGATGGTAGAG GTGTTGCAGAGGCACTGAATGAAACGGTTTGCGTCCATGATAAGTGCACTGGATTAACTATATTAGGAAAGTACTATTTCAGAATCGATCCTGTGGGAGA GGGTGCGAGATGGCGCCGATCATTTGGTCAGGAGATATACTCACCGTTACTTTTAGCCTTCACCGAGAGTGAAGGTAGCTGGGGAGATTCTCATGTCACA GCCTTCTCCGGACTGGATTCCTCATACAACTTACCCGACAATGTCGCAATAATAACCCTCCAGGATCAGGGTGATGGAGAAGTTCTACTCCGGCTGGCTC ACTTATATGAGATTTTCGAGGACGCGCAACTTTCGGCTGTGGCAACTGTAGAGCTTAAAAAGGTGTTCCCCAAGAAACAGATAAACAAAGTAAGTGAGGT GAGCTTATCAGCTAACCAAGAAAGAGCAGAAATGGAGAGGAAGAGATTAGTCTGGCAAGTCGAAGGGTTACCCCAAAATCGCAAACTTCTAAGGGGAAGA CCCGTAGATCCCGAAAAGCTATTTGTAGAACTTCATCCTGCAGAAATAAGGACCTTTATTATCAGTTTTAGGCAGTAAAGGTCCACTAGGACACTGATGA AAAATAAGCAATGTACTCAGAAATGTCCATTTCAATAAAGTTTATTGTTTCTCACTTTCTTTAGTCATCCCTTGACATCTAATCAAGTTTTATGATATCA CTTTTTCTGTATCTTTGGTTTGTATTTCTTCAAAACAATATGTTAGTAGTGTCTTTTGTTTAGGAGAAAATGGAATCCTCGAGAGTCAATCTCTGGCTCA CTTCCTATCAATTATAACTTACâBLAST |
| Tissue | pods |
| Gene name | LI_gene_194100; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_463853
| Blastp | Probable alpha-mannosidase At5g13980 from Arabidopsis with 68.19% of identity |
|---|---|
| Blastx | Probable alpha-mannosidase At5g13980 from Arabidopsis with 68.98% of identity |
| Eggnog | Mannosidase alpha class(ENOG410XQMZ) |
| Kegg | Link to kegg annotations (AT5G13980) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430110.1) |
| Pfam | Glycosyl hydrolases family 38 N-terminal domain (PF01074.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |