Ll_transcript_463894

• Id Trinity: TRINITY_DN52608_c0_g1_i16
• Name Transcript: Ll_transcript_463894
• Sequence: ATAGTTTTAACATTTATGGAAGAGGAAAAAACAAAAACTGTATTTGCAGTGTTGAAAAGTGGAACAGTGTTCTGAAGTGTGAAGTCAGTGGGAGAAAGAA TTAGCTTTGAAATTTGAGCATTGGATATGAAAACAGAGAGAAAGAATTAGCTTTGAAATTTGAGCATTGGATATGAAAACAGAGTGATATAAGATTATAG ATTGAGATCTGCATTCTTCTTTCTTTCCCTTTATATTATTCCATTTCTCAGATCCCCACTCCAATTCAGTTATATACATGATCTAGATTCTTCTGCGTTT TCATCGAAATCCGATTCTGAATTCGACACTGCGAGGGAGATAGAAGAAATGGCTGGAGGTGCTGCCGGTGGTTTTTTGACTCGAGCATTCGATTCTATGC TCAAGGAATGTTCTGGAAAGAAGTATCCCGAGCTTCACAAAGCTATTCACAATTATACTGAGATTACTAAAGAAACTGATCAGAGAAAGCAAGCGGTTTC TAGTGAGGAAAATCAAGCAGCACCCTCAGCTGAATCTGTGAGCACGAAAGAAACTCATGATGGAGCGGCTACTGCAACAGAAGCAGACCAGCCACAGACG GCTGAACATGTTTCTGATGCGGCAGATCTTGGCTCTAGCAAGCCTAAAAGTGGAAATATTACTCTTGTCTTAGCTAGTGCTGGAAATACACTTGATGGAG CTGATGCTGAACTTGTTTTAAATCCACTTCGAATTGCATTTGGGACAAAGAACTTGAAAATCCTTGAAGCTGCTTTAGATTGTCTTCATAAACTTATTGC ATATGACCATTTGGAGGGAGATCTTGGGTTAGATGGTGGTAAAAATTCCCAATTGTTTACATATATTCTAAAAATGGTTTGTGATTGTATTAATAATTCA TCGCCCGACAGGTATACAAATCGCTTCTCACTATTGTGACCGAATATATGTTCCTTGTTATACCTATTCATTTTTAAGAGTCAATATGCAGTATTGTTCT TCAAGTGCTGAAGGCACTTATCACTGCCGTGTCTTCCTCAAAATTCAGAGTACACGGCGAGCCTTTGCTTGGAGTTATCAGAGTATGCTACAATATTGCT CTGAATAGCAAGAGTCCTATAAACCAAGCAACATCAAAGGCGATGTTGACACAGATGATAAGCGTTACTTTCAGGAGAATGGAGACTGATCTGGTTGAAA CTTCATCTGGTTCTAGTGGGCATACAATTACAGAGGCAGCTTCAGCAGAAAACTTAAACACAAAATCTGATGAAATTTACATGGGAGACTCAAATGAAAA AGAAACGACTTTAGGTGATGCACTCAGCCAAGCCAAAGATACGTCTTCAACATCTCTAGAGGAACTTCAAAATCTTGTCGGGGGTGCTGATATCAAGGGC TTAGAAGCTGCACTGGACAAGGCTGTACATACTGAAAATGGTAAAAAGATGACACGTGGGATTGATTTGGAGAGCATGGGTATAGTTCAACGTGATGCTT TGTTGATATTCCGCACTCTTTGCAAGATGGGTATGAAGGAAGATAAGGATGAAGTCACAACCAAGACAAGGATATTATCACTTGAGCTTCTTCAGGGTTT GTTGGAGGGAGTTAGCCACTCATTTACAAAGAACTTCCATTTTATTGATTCTGTGAAGGCATATCTTTCATACGTTTTGTTGCGAGCTTCAGTTTCACAA TCGCCTGTCATATTTCAGTATGCAACTGGAATACTCTTGGTGCTGTTATTGCGATTCAGGGAGACTCTAAAAGGTGAAATAGGCATCTTCTTTCCATTGA TAGTTCTTAGACCGCTGGATGGTTTAGAATTTCCTGTCAACCAAAAGCTTAGTGTTCTTCGGATGCTAGAGAAAATATGTAAGGATTCACAGATGCTTGT TGACATCTTTGTGAATTATGACTGTGATCTTCAAGCGCCAAACTTGTTTGAACGAATGGTTACAACTCTATCCAAAATTGCTCAAGGGACTCAAAATAAT GGTCCAAATTCAGTTGCTGTTTCTCAAACAGCTGCTGTTAAAGGTTCATCACTTCAAGGTCTTGTGAGTGTACTTAAATCACTGGTTGATTGGGAGCAAT CACATCGTGAATCAGAAAGGTTAAAGAATAATCAACAAGAAGGAGTTTCAGGTGTAGATTCTTCTGAAATAAGACCCAGGGAAGATGTAAGCAATGATTT CGAGAAAGCAAAGGCCCATAAGTCCACATTGGAGGCTGTCATTGCTGAGTTCAACAGGAAACCAATGAAAGGGGTGGAATATCTAATATCAAATAAGTTG GTGGACAACACACCTGCTTCAGTCGCTCAGTTTTTGAAAAACACCCCCCATTTGGATAAGGCTAAAATTGGTGACTATTTAGGTCAACATGAAGACTTTC CTCTTGCTGTGATGCATTCTTACGTAGATTCTATGAAATTTTATGGAATGAAATTTCATACCGCAATCCGAGAGTTTCTTAAAGGGTTCCGACTTCCTGG GGAAGCTCAAAAGATAGATCGAGTCATGGAAAAGTTTGCCGAGAGATACTGTGCAGACAATCCGAGCCTTTTCAAAAATGCAGATACAGCATATGTTCTT GCTTATGCTGTTATTATGTTAAATACTGATGCTCATAATCCAATGGTTTGGCCTAAGATGTCCAAGTCAGATTTTGTCCGCATGAATGTCAGGGACGACG TGGACGAATGTGCTCCTAAAGAACTGTTGGAAGAGATCTATGATTCCATTGTCAAAGAAGAGATTAAAATGAAAGATGAGACATCTTTAATTGGGAAAGG GAGCAGGCTGAAATCAGAAGGTGAAGAAGGACGCCTTGTCAGTATTCTTAACCTGGCACTCCCCAAAAGAAAGTCATCAGCAGATGCCAAGTCTGAAAAT GAGGCCATCATTAAGAAAGCGCAAGCTATATTCAGGAATCAGGGTGTGAAAAGAGGAGTTTTCTACACTGCTCAGCAGATTGAACTTGTAAGGCCCATGG TAGAAGCTGTTGGGTGGCCTTTGCTTGCTACTTTCTCTGTAACTATGGAGGAGGTTGAGAACAAGCCTCGTGTTGTTCTGTTGATGGAGGGCTTTAAAGC TGGCATACATGTTGCATATGTGCTTGGAATGGATACCATGCGCTATGCTTTTTTAACATCTCTGGTCAGGTTTACTTTCTTGCATGCCCCCAAGGAAATG CGCAGTAAAAATGTCGAAGCTTTGCGCACACTGTTGGTTCTTTGTGAGTCAGACACGGACTCTCTTCAAGACACATGGAATGCAATTCTGGAATGTGTTT CTCGCCTTGAATATATAACCACTACTCCTGCAATTTCTGCCACCGTGATGTATGGATCAAACCAAATCTCCAGGGATGCCGTTGTTCAATTTTTAAGGGA GTTAGCTGCCAAACCTTCTGAACAAGTTTTCATGAATAGTGTCAAACTACCCAGTGATTCAGTTGTGGAATTCTTCACTGCTCTCTGTGGTGTATCAGCT GAAGAGCTAAAACAAACCCCAGCTCGTGTTTTCAGCTTGCAGAAGCTTGTTGAAATTAGTTATTACAATATGGCTCGTATACGTATGGTCTGGGCTAGAA TCTGGTCTGTTTTAGCAAACCATTTTATATCAGCTGGTAGTCA
• Tissue: pods
• Gene name: LI_gene_194121;
• Additional information: details;

Expression of Ll_transcript_463894

FPKM

• PAB: 0
• PNAB: 1.3
• PS1: 1.7
• PS2: 0.7
• PS3: 1
• PW1: 0.6
• PW2: 0.6
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_463894

• Blastp: Brefeldin A-inhibited guanine nucleotide-exchange protein 5 from Arabidopsis with 75.78% of identity
• Blastx: Brefeldin A-inhibited guanine nucleotide-exchange protein 5 from Arabidopsis with 76.5% of identity
• Eggnog: and Sec7 domain(COG5307)
• Kegg: Link to kegg annotations (AT3G43300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463373.1)
• Pfam: Guanine nucleotide exchange factor in Golgi transport N-terminal (PF12783.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;