| Id Trinity | TRINITY_DN52616_c0_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_464062 |
| Sequence | AATTGGGTTAGTTGCATGGCCTTCTCTTTTAGCTGAGATTTTGTGTGATAACAAAGTAATATTCTGAAATACAAGTCTCACAAATGCTGATCTAGAAATC ATCAAATCAGGTCTGTTGGAACAAAACAGAAAAACAGAAGAAATAGAGAATGAAGAAGAATGAGTATTGAATAATGCCTCTTGCTTTATTGAAGAATGAA TGAAACAACAACTTTCCTTATATAGAAACTACCAACTAACAAAAACAGAAATTCAAATTGAGCACATGCTAAAAATGGAAACTATTAGTTAAACAAAACT AACTTCTATTTTTCAGAACTTGGATTATATTCCAACATCCTCCCTTAAGCCAAGTTCCTTAAGTGATGCCATGCCAATCTTCTTTCTCAATTCTTCAAAT CTGCAGCACTTTAATGCCTTGGTGAAGGCATCAACAAGCTGAAATTCAGTCTTGCAATACTCCAATTTCAACCTTCCATTCTTCACCAGATTTCTTAGGA AGTGAAATCTAATCTCTATGTGCTTGCTTCTTCCATGACTCACTGGATTCTTGGACAAGCTTATAGCTGAGATGTTGTCTAACTTGAGATGCATAGGTGT CTTAACCTCAACCTGCAACTCCTTCATTAATTCTGCCAACCAAACAGCCTGACATGCTGCATAAGAACTTGAGATGTACTCTGCTTCATAGCTGGATAAG GCTATGACAGATTGCTTCTTGGAACACCAAGCAATTGGTGCATTATTCAACAAGAATAGATAACCTGAGGTGCTCTTTCTTTCAACCAAATCCCCTGCAA AATCTGAGTCTGCATACCCAGTAATCACAATTTCTGCACACTGTTTCTGAGTAGAGCTTGTTGGAAATAAGATGCCTTGATCAATGGTTCCTTGTACATA CCTCATCACTCTTTTTGCAGCAAGCATGCGTGACTTCTTTGGGTTGCACATAAACCTACTCACAAGTCCTACTCCATAGATGAGATCAGGCCTTGTGTTG CACAAAAATCTCAAGGAACCTACTATCTATTTGAATTGTGTAGCATCCACTGATTCACCATTTTCATCAGTGTTGAGCTTCACACTAGTCTCAACTGGAC TTGAAGCAGCATTGCACGAATTCATGTTGAACTTTTCTACCAATTCTTTGGCATACTTACTTTGGTGCATCAGCAGCCCTGCAGAAGTATGTGTGAACTC CATGCCAAGGAAGTAGCTAAGTTTTCCCAAATCAGTCATTTCAAACTCTGCTTCAAGAACCTTTTTGAACCCTTCAATCTTCTCTGAGTTTGATCCTGTG ATTAGCAGATCATCTACATACAAGCAAATGATCATTAAGTCTTCATCTTCACACTTCTTGACATAAACACCATGTTCTACCTCACACTTATTAAACTGCA ATTTGAAGAGAAATGAGTCAATTCTCTTATTCCAAGCCCTTGGTGCTTGCTTGATTCCATATAGTGCCTTCCTTAGCTTGTACACTTGGTGCTCTTTCCC TCTGATTATGAAGCCTGGAGGCTGCTGCACATACACCTCTTCTTCTAAGGGACCATGTAGGAAGGCTGACTTTACATCCAATTGAAACATTGGCCACCCT TTTGCACAAGCTATCCCAACCACCAATCTGATTGTTTCAAGTCTGGCTAGTGGTGCAAATACCTCAGTATAGTCTATTCCTTCTCTTTGTAGGAATCCTT TTGCCACCAATCTTGCCTTATACTTGTCAACTTCACCATCTCTTTTCGTTTAGTTTTGAAAAGCCATTTTACACCAACTATTGTCTGCCCATCTGGAAGA TCAACACGTTCCCATGTATGATTTCTTTCTATGACTTTAATTTCTTCATTTATTGCCTTTTGCCATTTTGCCTCTTTCACAACACTTTCAAAGGTTGTGG GATCATAACATGAAAATAATGCAAAATGAGTAACAAGATCATCAATTTGATTAATTCCAGTTACCTCAAAATCTTTCATCCAAGCTGACCTTTTTCAAAT CCGACTTCTATGAGGTTCAACATGTGCATCTGTTGAAGTTTCTCCTCTTGTTGGTGTTGCAATTTTTTATTCTCCTCCATTCTCTTGTTCCTCTTCTTCA AATCCAAATTCTGAAGTATTTGGATTAGGATGCTGCCCATTCCACTCCCAAGTTCTTTCTTCATCAAAAATAACATCTCTGCTTGTTACAATCCTTTTTG TGAGAGGATTGTACAATTTATATGCTTTGGAGGCTTCACTAACACCAAGGAATACACACTTTTCACCCTTATCATCAAGCTTCTTCCTTTTCTGATCTGG AACATGAGCATAAGCTATGCAACCAAAAATTTTGAAATGCTCAACACTTGGCTTATGTCCCTTCCATGCTTCTTCAGGTGTCACGTTCTTTACAACAAAG GTGGGGCTTCTGTCCAACAAATGAATGCTCCAATTTACAGCTTCTGGCCAAAAATTCCTTGGCACTCCACTCATCTTCAAGATTGTTGGAACCATATTCA AGATTGTCCGATTCTTCCTTTCTGCAATGCCATTTTGTTGTGTGGTGTGTAAGCTGCTGTAAGTTGCCTCTTGATTCCATGTATGTCACAAAAATTTACA AATTCTTGTGAGTTGTATTCACCACCACGATCACTGCGAAGAACTTTGATTGCATATCAACTTCCTCTTTTCAACAATTGCTTTATAGTGTTGGAAAACT GATAGAGCCTTAGATTTTTCCTGTAGAAAATAAACCCATGTTTTTCTACTATAATCATCAATAAATGTAATAGAGTACTGTTTACCACCATTTGAGGTAG GATTAATAGGTCCACAAATATCAGAATGAATCAACTCCAAAACTTGCTTTGCTCTCCATGATTTTCCTTGTGGGAATGATGAACGATGTTGTTTGCCAAC AACATATTCTTCACAAATTTGAGATGGATTAATTATTTGTGGAAGACCTACCACCATATTTTTCTGATGAAGTGTCTTCAATCCATTGAAATTCAAGTGA CTATAGCGAAAATGCCAAAGCTATGATGGATCATTCACTTCACTCACCAAACAGGTTTGTGCACTTTGAATCTTCAAGGGAAACAACCTGTTAGAACTCA TTTCAACAACTGCAATGGCTCCCCTGACAGGATCATATATTTCACAAGCATCTTTTTGTATGGTTATTATATAACCCTTTTCCTGCAATTGACCAGCACT CAACAAATTGCTTTTCAAGTCGGGAACATAAAATACATTAGAAATGGTTTCCACCAAACCATTCTTGGTTTGAATTTTAATGTCTCATTTTCCCATCATA TTTACAGTAGAACAATCACCAAAATTTACTTTAGAACGAAAGTTTTCGTCTAAATAAGTGAAAGAAGACTTACTTCCAAACATGTGGTTGCTACAACCAG TATCAACATTACCACACATCAGATTGGAATTTCTCATGAGATGTCATTAGCAATGTTTCTTCTTCCTTCTCCTCTACAAAGTTAGATTGTTCTCCTTTTC CTTTGTAGTTAGGCAATTTTGTGTAACACTCAGATGCATAGTGACCAAACTTATGACATCTGAAACACTCTACCTTGGGTTTTTCATAAATTCTACCTCT TCCTTGTTGTTGGTGATGATTGCCTTTAAAGTTCCTGCTGGAATCTCTATTTTCGCGACCTCCATATCCTCTACCTCTACCTCTACCCCTTCCTCTGAAG TTATTGGAATGAGTATTGGTGAAAGCCTTCAATGCTTGTTCCTCCACTGTTGAGGTTCTATGCATCTTTTGTTCATGAACCAACAAGGAACTCTGAAGTT CATCAGTGTCATTAGGCTCTTCAATTGAACACACCACGTAGTCAAATTTTGGTGTGAGTGAGCGTAGAATTTTTCAACAACAAGAGTGTCTCCCATCTTT TCTCCATGAATTCTCATGCTGTTTGCAATTCCCATGACCCTTGAACAATAATCAGTAACTGACTCACTTTCCTTCATTTGCAAAGTTTCAAAGTCCCTTC TCAAAGCTTGAAGTTGAGCACGTTTGACTCTAGATGAGCCTTGGTATTTCTTTGCAAAGAATGGTTTCCAGGATAGAGCGATCAATGACTTGAAATAAGA AATTTTTTGTTCTCAAATCTTTCAACTTCATTGCATCATGCTCTCTGTTCTGTGCAGCAGTAACTTCACTGCCTTCTTCTGGTGTTACAAGACAACCACT TGCCAGTATTCCTTGGACCTTAAAATATTTTCCATCAACATACTCCAATGTTCATAGTGACCATCAAAATGTGGAATGGCTGGTTGTACAAAATTATCAA TAGTCATTCTCTCAACCTAATACAATTACTAAATGGACTTTATTTAAGTATTAAATGGTCTATTTGCTGCAAATTTGCAAACCTGCAGCGTCTGGTTTTC TTTTCTTATCTGGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_194172; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464062
| Blastp | Copia protein from Sophophora with 44.57% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 39.09% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020987654.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |