Ll_transcript_465572

• Id Trinity: TRINITY_DN52630_c1_g1_i1
• Name Transcript: Ll_transcript_465572
• Sequence: TGGACACTGGGCGAACCGTGGTCTGTACAATCCACCAGCCAAGCATTGATATATTTGATTCTTTTGATGAGCTAATTCTCTTGAAACGCGGAGGCGAGGA AATATATGTGGGACCTTTAGGCCAGCATTGCTCTCAACTGATCAATTACTTTGAGGGAATTATTGGAGTGCCAAAAATTAGGAATGGCTATAATCCTGCC ACTTGGATGTTGGAGATTACTTCAGAAGCACAAGAAGCCACTCTTGGAGTTAACTTTGCTGAAATATACAAGCATTCTGACCTATATAGGAGAAACAAGG ACTTGATAAGGGAACTTAGTACATCGGCACCGGGTTCTAAAGACTTGTATTTCCCAACAACGTACTCACAAACTTTCTTAACCCAATGCATCGCTTGCCT TTGGAAACAACGCCTGTCATATTGGCGAAATCCGCCATATAGTGGAGTGAGATTTTTATTCACAACATTCATAGCCTTGATGTTCGGAACAATATTTTGG GATATCGGCTCCAAAAGGGGAAGAATACAAGATCTGTTCAATGCAATGGGGTCCATGTATGCTGCAGTTCTCTTCATTGGGGTAAGTAATGCTACATCTG TGCAACCAATTGTAGCCATTGAAAGAACAGTCTTCTATAGAGAAAGAGCTGCCGGAATGTACTCGGCTTTGCCGTATGCATTTGGACAGATTGCTATTGA AATCCCATACATATTCATACAAACCGCGGTGTACGGGATAATAGTATATGCCATGATTGGTTTTGAGTGGACTGCAAGCAAGTTCTTTTGGTATATCTTC TTCATGTTCTTCACCTTTTTATACTTCACCTTCTATGGCATGATGGCTGTGGGTGCTACCCCGGATCAGAATATTGCTGCTATAACTTCATTTGCATTCT ACTTGATATGGAACCTTTTCTCAGGATTCATCATTCCTCAAAAGAGAATGCCAATATGGTGGAGATGGTACTTCTGGATTTGCCCTGTGTCATGGACCCT ATATGGATTGGTGACTTCACAATATGGTGATGTACAAGAACACTTAGAGACTGGAGAGACAGTGCAAGAGTTTCTTTTTAATTATTTTGGGTATAGACAT GATTTCATAGGAGTAGCTGCATCTGTTCTAGTTGGCTTTACACTTCTCTTTGGATTTACCTTTGCCTTTTCAATTAAG
• Tissue: pods
• Gene name: LI_gene_194280;
• Additional information: details;

Expression of Ll_transcript_465572

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.4
• PS2: 0.1
• PS3: 0.1
• PW1: 0.1
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465572

• Blastp: ABC transporter G family member 36 from Oryza sativa with 71.1% of identity
• Blastx: Pleiotropic drug resistance protein 1 from Nicotiana with 71.66% of identity
• Eggnog: (ABC) transporter(COG0842)
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001577)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437695.1)
• Pfam: ABC-2 type transporter (PF01061.23)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;