Id Trinity | TRINITY_DN52630_c2_g1_i1 |
---|---|
Name Transcript | Ll_transcript_465574 |
Sequence | CTTTCTTCATATCTTAGACCCTTCATCCCAAATCACTCTCATGAAAGGAAAATAGAAAACTAAGAAGAGAAGGCGCTTAGTAGAAAGGAGTACCAAACAG AAAAGAGAGAAACCAAACATATTTTCCACTTCTTCAGCAAAGATTTCATAACAAGGCAAGTACAAAATGGATTCTAATTTAAGCAGAAGCATAAGCAGAA GCATAAGCAGATCAAATTGGAGAATGGAAGAAGTGTTTGCAAGTGGAAGATATTCTAGAAGATCATCACATGTAGATGAAGATGAAGAAGCTCTAAAATG GGCTGCAATAGAAAAGTTACCAACTTATGATAGATTAAGAACAAGTATCATGCAAACTTTTGGTGAAGGTGATCAAATTCATGGAAACAACAAAGCACAA CACAAAGAAGTTGATGTTAGAAAGCTAGATGTGAATGATAGGCAACAAATTATTGACAAGATTTTCAAAGTTGCTGAAGAAGATAATGAAAAGTTCTTGA GGAAATTTAGAAACAGAACTGATAAGGTTGGGATAAGACTTCCAACAGTAGAAGTGAGGTTTCAAAATTTGAGCATTGAGGCTGATTCCTATGTTGGAAG CAGAGCTCTACCAACACTACCAAATGTAGCACTCAACATTCTTGAATCAGGTCTTGGCATGTGTGGAATTAGTACCACCAAGAGAACAAAGCTCACAATT CTTAAGAATGCCTCAGGCATTATTAAACCATCAAGGATGGCCCTTTTACTAGGTCCCCCTTCTTCAGGGAAAACAACCCTTTTGTTGGCATTAGCTGGAA AATTGGACCCAGAATTGAGGGTAAAAGGAGAAATCACTTATAATGGACATAAGCTTAATGAGTTTGTTCCAAGAAAAACTTCAGCATATATTAGCCAAAA TGATGTTCATGTTGGAGAAATGACTGTGAAAGAAACCCTTGATTTCTCAGCTAGATGCCAAGGTGTTGGAACTAGATATGATCTATTAACTGAACTTGCT AGAAGAGAAAAAGAAGCTGGAATATTTCCAGAGGCAGAACTTGACCTTTTTATGAAGGCTACTGCAATGGAAGGAGCAGAAAGCAGTCTCTACACTGATT ATACTCTCAAAATATTGGGGCTTGATATTTGCAAAGATACCATAGTGGGTGATGAAATGCATAGAGGTGTATCTGGTGGCCAAAAGAAGCGTGTAACAAC AGGAGAAATGATTGTTGGGCCCACAAAAACATTATTCATGGATGAAATATCAACAGGTCTAGATAGTTCAACAACATTTCAAATTGTGAAATGCTTACAA CAAATTGTACATCTCACTCAAGGAACTATCTTAATGTCACTACTTCAACCTGCTCCTGAGACCTTTAATCTATTTGATGACATCATTCTTATAGCTGAGG GCCAGATTGTGTACCAAGGCCCACGTCAGCACATTGTTGAATTTTTTGAGTCATGTGGGTTTTGTTGTCCTCAAAGAAAGGGTACTGCTGATTTCTTACA AGAGGTTACCTCAAGGAAGGACCAAGAACAATATTGGGCAGACAAAAACAAAGCATATAGATATGTGACAGTGACAGAATTTTCAAACAAGTTCAAGAGA TTCCATGTTGGAATGCAACTAGAGAATGAGTTATCTGTCCCATTTGACAAATCAAATGCACACAAAGCAGCACTTGTTTACAACACATACTCAGTGACCA AAATGGATCTTCTTAAAGCATGTTGGGACAAAGAATGGTTACTTATTAAGAGAAACTCATTTGTCTATATATTCAAGACAGTGCAAATTTGCATCATTGC TATAATAGCTGCTACTGTGTTTTTGAGGACTGAAATGCACCAAGATAGTGAAGATAATGCTTCTCTTTACATTGGTGCAATTTTGTTCTCAATGATTATG AACATGTTCAATGGTTTTGCTGAATTGGCACTCACCATTGGAAGGCTTCCAGTGTTTTATAAGCATAGGGATCATCTTTTTCACCCTGTTTGGACTTATA CACTTCCTAATTTCCTTTTGAGGATTCCTATTTCCATTTTTGAGTCTCTTGTTTGGATGCTTGTTACTTACTACACCATAGGATTTGCACCTGAAGCTAG CAGGTAAAACTCAATCACATGTTTTTTTTCCTTCATAATTTTGCATGTGGTATATTTGAAGCATTGTTTTAAATCGCCGACTACCAACAAAGCGTTAGTC TAGTGGTGTAAGGTCTCACTGGATCCCTAGAGTCAAATTGGATTCCCTGGAGGGATATTTGTTAGGAGAGGCAGCCCCGAAAAGGGTTATTTCCTACGAG GGCCTACCTTGGTTATACCAACAATTTTTTTTGTCGACCACATCATTTGATGCATTCGCAATACTGCGGTTATAGTGACTACCATAGCCGTATCATACCA CAATTGCAGTGTGATACCGAATCACAATGATGTGGCTGCATTAGGCCGCAACGCAACTGCATTTGGGCCGTAACAATTCAAACATATTTTTTAGTCACAA ATTCAGCTAATGGTTACAATACGCATCATAACGACGACAATCACCTCAATCACAGTAACCGAAACCGCAATTTAAAACCATACTGATTTGAACTCATTTA TATGTGTTTATAGTAATCAACCTAATATATTTTATTCATTAAGTTGAGAAATTTTAGATGACATTATTAAGAGTATTGTCCCCAGAGGTTTAATTTGATG CTATGATTATGATGTGATGTGATGAATTTGTATTTTGTACTAAGTGATCATTTTGATGCCTAATCCAACTTTCAGGTTCTTCAAGCAACTTTTGTTGGTA TTTCTTATCCAACAAATGGCAGCTGGAATGTTTAGGGTCATTTCTGGAGTCTGTAGGACAATGATTATTGCTAACACTGGTGGAGCCCTTATGCTCCTTC TTGTTTTCCTACTTGGAGGTTTCATCCTTCCAAAACGTGCAATTCCTGATTGGTGGGTATGGGCCTATTGGGTTTCACCACTGTCATATGCTTTCAATGC AATGTCTGTGAATGAAATGTATGCTCCAAGGTGGATGCATGCAAATACTTCTTCTGATGGAACTACAACTTTGGGTCTTGCTGTATTGAGGAACTTTGAT GTTTATGCTAAAAGAGATTGGTACTGGATAGGTGCTGCAGCTCTTCTGGGTTTCACGATTTTGTACAACGTTCTCTTCACGCTCGCGCTTATGTACCTTA ATCCTTTTGGAAAGAAACAAGCAAATTTATCTGAAGAAGATGCAAATGAATTGGAGGCTGAAGGAGACTTCGATGACGCACCTAGAATCGTAAGGCCACC TGCACCGAATAGTGAATCAGTGCTTCGATCATTATCTACTGCTGATGGAAATAAATCAAGAGAAGTGGCAATGCAGAGAATGAGCAGCCAAGCTAATCCC GGTGGAGTCAGAAATGCTGATTCAACACTCGGTTCAGCCACGGGAGTCACCCCGAAAAAAGGAATGGTTTTACCTTTTCAACCGCTTGCGATGTCCTTTG ATACTGTTAACTACTATGTGGACATGCCTGCAGAAATGAGAGAGCAAGGAGTAACAGAAGATCGGCTGCAATTACTTAGGGGAGTAACAAGTGCCTTTAG GCCCGGAGTTCTAACTGCACTAATGGGAGTTAGTGGAGCTGGGAAGACAACTTTGATGGATGTTTTAGCCGGAAGAAAGACCGGTGGCTACATCGAAGGA GATATTAAAATCTCTGGGTACCCTAAGAACCAAGAAACCTTTGCAAGAGTTTCTGGCTATTGTGAACAAACTGATATTCATTCACCACAAGTTACTATCA GGGAATCATTGCTTTACTCCGCGTTCCTTCGGTTACCTAAAGAAGTTAGTAAGGAGGAAAAGATTCAATTTGTGGACCAAGTTATGGACTTGGTAGAACT GGATAATCTTAAGGATGCTATTGTCGGGCTTCCAGGAGTTACAGGGTTGTCAACTGAACAGCGAAAGAGACTGACAATCGCTGTTGAACTTGTCGCTAAT CCCTCGATCATTTTCATGGATGAACCAACTTCAGGTCTAGATGCAAGAGCAGCAGCTATTGTTATGAGAACTGTGAGAAACACCGTCGACACCGGAAGAA CAGTTGTCTGCACAATTCACCAGCCTAGCATTGATATCTTCGAAGCCTTCGATGAGCTCCTATTGATGAAAAGAGGAGGGCAAGTGATATACTCAGGACC CTTAGGCCAGAATTCACACAAGATCATAGAATACTTTGAGGCAATTCCAGGGGTCCCCAAAATTAAGGAAATGTACAACCCAGCAACATGGATGCTAGAA GTAAGCTCCATAGCAGCTGAAGTCCGGCTCGGAATGGACTTCGCAGAATACTACAAGTCCTCAGCTTTGTTTCAGCGAAACAAAGATCTCGTCAAGGAGT TAAGCACACCACCACCGGGAGCACAAGATCTGTATTTCCCTACTAAGTACTCTCAATCAACATTGGGGCAATTCAAGTCCTGTCTATGGAAGCAGTGGTT GACATACTGGAGGAGTCCGGATTATAACCTTGTGAGATACTTCTTTACCTTGGCTTGTGCCCTCATGATAGGAACAGTATTCTGGAGAATTGGCAGACAC AGGGAGAGCTCAACTGACTTGACCATGGTTATAGGAGCAATGTATGCTGCAGTTATTTTCGTCGGAATCAACAACTGCCAAACCGTTCAACCGATAGTAG CGGTCGAAAGAACAGTTTTCTATAGAGAAAGGGCTGCTGGAATGTATGCTCCTTTGCCTTATGCCATTGCACAGGTTTTTACTGAAATACCATATGTGTT CTTCCAAACTGTATATTACTCAGTCATAGTGTATGCTATGGTGAGCTTTGAATGGAAAGTGGAGAAGTTCTTTTGGTTCTTCTT BLAST |
Tissue | pods |
Gene name | LI_gene_194282; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465574
Blastp | ABC transporter G family member 35 from Arabidopsis with 71.38% of identity |
---|---|
Blastx | ABC transporter G family member 36 from Arabidopsis with 74.2% of identity |
Eggnog | (ABC) transporter(COG0842) |
Kegg | Link to kegg annotations (AT1G15210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429309.1) |
Pfam | ABC-transporter extracellular N-terminal (PF14510.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |