| Id Trinity | TRINITY_DN52630_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_465586 |
| Sequence | GCCACAGGAGTTGCCCCAAAAAAAGGAATGGTTCTACCTTTTCAACCGCTTGCGATGTCTTTTGATAGTGTCAACTATTATGTGGACATGCCTTCTGAAA TGAAAGAACAAGGAGTGAGTGAGGATAGGCTACAATTGCTAAGGGAAGTAACTGGTGCCTTTAGGCCTGGAGTTCTAACTGCTTTAATGGGAGTTAGTGG AGCTGGAAAGACAACGTTAATGGATGTTTTAGCAGGAAGAAAGACCGGTGGCTACATTGAAGGAGAAGTTAGAATCTCTGGCTTCCCTAAGAACCAAGAA ACCTTTGCTAGAATTTCAGGATATTGTGAACAAACTGATATACATTCACCCCAAGTTACTGTCAGAGAATCTCTGATTTACTCAGCTTTCCTTCGGTTAC CTAAAGAAGTCAGTGATGAGGAAAAGATGAAATTTGTGGAAGAAGTGATGGATTTAGTGGAGCTGAATAATCTCAAGGATGCTATAGTTGGACTTCCAGG TGTTACAGGGTTGTCAACTGAACAGAGAAAGAGGCTAACGATCGCTGTTGAGCTTGTTGCTAATCCTTCAATCATTTTCATGGATGAACCAACTTCCGGT CTTGATGCAAGAGCAGCTGCCATTGTTATGAGGACTGTGAGAAACACTGTTGACACTGGAAGAACAGTTGTCTGCACAATTCATCAGCCTAGCATTGATA TCTTTGAAGCCTTTGATGAGTTGTTGCTGATGAAGAGAGGAGGGCAAGTAATCTACTCAGGGCCTTTAGGAAGGAATTCACACAAGATTGTAGAATATTT TGAGGCAATTCAAGGGGTCCCAAAAATTAAAGATAAGTACAACCCAGCTACATGGATGTTAGAGGTAAGCTCCATAGCAGCTGAAGTTCGGCTCGGAATG GACTTTGCTGAATACTACAAGACATCAGCTTTGGCTCAGTAAGTCTCTACAAACAGCTAAAACCTTAATGTTTCCATAGAAACAACTTTTTTCTCAAAAA ATGTTTGGGCAATAATCTGATATGTTCGGCAAACCTGATTTAATTGAAATGCAATATACAGTAGTAATTGATTATACATACTGATATATGTACTTATGAG CAGGAGAAACAAAGCTCTTGTAAAGGAGTTAAGTGTACCACCTCCTGAAGCAAAAGACTTGTATTTCCCTAGTCAGTATTCTCAACCAACTATGGGACAA TTTAAATCATGCCTATGGAAGCAGTATCTTACTTATTGGAGGAGTCCAGATTATAACCTTGTCAGATATATGTTTACCTTGCTTGTTGCTCTAGTGGTGG GGACTGTATTTTGGAAAGTTGGCACAAAAAGGAGTAACTCCGGTAACTTGACCACCATTATAGGAGCAATGTATGGCTCTCTCTTTTTTGTTGGTGTTAA CAACTGCCAAACTGTTCAACCAGTTGTAGCTATTGAAAGAACAGTGTTCTATAGAGAAAGGGCTGCTGGAATGTATTCTGCTTTACCTTATGCCATTGCA CAGGTTATTATTGAAATACCATATTGCTTTGTTCAAACCATGCTTTTCTCGTTCATAGTGTATGCTATGGTGAGCTTTGAATGGCAAGTGGCAAAGGTGT TTTGGTTCTTATTTGTGAGCTTCTTTACCTTCTTGTACTTCACATACTATGGTATGATGACTGTTTCCATTACACCAAACCACCAAGTAGCATCAATCTT TGGAGCTGCATTCTATGGACTCTTCAATCTCTTCTCTGGTTTCTTTATTGCTAGACCAAAAATTCCTAAGTGGTGGGTATGGTATTACTGGATTTGCCCA ATTGCATGGACAGTGTATGGATTAATTGTGTCACAATATAGAGATGTAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_194282; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465586
| Blastp | ABC transporter G family member 29 from Arabidopsis with 87.3% of identity |
|---|---|
| Blastx | ABC transporter G family member 42 from Oryza sativa with 72.24% of identity |
| Eggnog | (ABC) transporter(COG0842) |
| Kegg | Link to kegg annotations (AT3G16340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_017425535.1) |
| Pfam | ABC transporter (PF00005.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |