Id Trinity | TRINITY_DN52630_c2_g1_i22 |
---|---|
Name Transcript | Ll_transcript_465599 |
Sequence | CTCTCTCTTTATACAACAAAACTCGACTAGGTTCAAGGCTCTACCATTTCCAAATTCCTCTCACAAGTTGAAAACAAGAAAAGAAAAGGAGAACAAAGAA AAGAAAAGTAGAAGATTTGCAGAGAATAGTAACATAGATACAAAAATTGAATAAGCCAGAAATGGCTTTCTAGTTCCAAACACCAACAAACAAATCCTCA CCCTTTTGAGTAGTAACTCAATACATTCAAGTAGCATATTAGGAACAAGGAGGGGCCAAAATGGATGGGAATATAAGCAGAAACAAAAGTGTGAGTAGCA ATTTAAGCAGAAGCATAAGTAGAAGTTTAAGCAGATCAGGATGGAGAATGGAAGAAGTGTTTGCAAGTGGAAGATATTCTAGAAGATCATCACATGTAGA TGAAGATGAAGAAGCTCTAAAATGGGCTGCAATAGAAAAGTTACCAACTTATGATAGATTAAGAACAAGTATCATGCAAACTTTTGGTGAAGGTGATCAA ATTCATGGAAACAACAAAGCACAACACAAAGAAGTTGATGTTAGAAAGCTAGATGTGAATGATAGGCAACAAATTATTGACAAGATTTTCAAAGTTGCTG AAGAAGATAATGAAAAGTTCTTGAGGAAATTTAGAAACAGAACTGATAAGGTTGGGATAAGACTTCCAACAGTAGAAGTGAGGTTTCAAAATTTGAGCAT TGAGGCTGATTCCTATGTTGGAAGCAGAGCTCTACCAACACTACCAAATGTAGCACTCAACATTCTTGAATCAGGTCTTGGCATGTGTGGAATTAGTACC ACCAAGAGAACAAAGCTCACAATTCTTAAGAATGCCTCAGGCATTATTAAACCATCAAGGATGGCCCTTTTACTAGGTCCCCCTTCTTCAGGGAAAACAA CCCTTTTGTTGGCATTAGCTGGAAAATTGGACCCAGAATTGAGGGTAAAAGGAGAAATCACTTATAATGGACATAAGCTTAATGAGTTTGTTCCAAGAAA AACTTCAGCATATATTAGCCAAAATGATGTTCATGTTGGAGAAATGACTGTGAAAGAAACCCTTGATTTCTCAGCTAGATGCCAAGGTGTTGGAACTAGA TATGATCTATTAACTGAACTTGCTAGAAGAGAAAAAGAAGCTGGAATATTTCCAGAGGCAGAACTTGACCTTTTTATGAAGGCTACTGCAATGGAAGGAG CAGAAAGCAGTCTCTACACTGATTATACTCTCAAAATATTGGGGCTTGATATTTGCAAAGATACCATAGTGGGTGATGAAATGCATAGAGGTGTATCTGG TGGCCAAAAGAAGCGTGTAACAACAGGAGAAATGATTGTTGGGCCCACAAAAACATTATTCATGGATGAAATATCAACAGGTCTAGATAGTTCAACAACA TTTCAAATTGTGAAATGCTTACAACAAATTGTACATCTCACTCAAGGAACTATCTTAATGTCACTACTTCAACCTGCTCCTGAGACCTTTAATCTATTTG ATGACATCATTCTTATAGCTGAGGGCCAGATTGTGTACCAAGGCCCACGTCAGCACATTGTTGAATTTTTTGAGTCATGTGGGTTTTGTTGTCCTCAAAG AAAGGGTACTGCTGATTTCTTACAAGAGGTTACCTCAAGGAAGGACCAAGAACAATATTGGGCAGACAAAAACAAAGCATATAGATATGTGACAGTGACA GAATTTTCAAACAAGTTCAAGAGATTCCATGTTGGAATGCAACTAGAGAATGAGTTATCTGTCCCATTTGACAAATCAAATGCACACAAAGCAGCACTTG TTTACAACACATACTCAGTGACCAAAATGGATCTTCTTAAAGCATGTTGGGACAAAGAATGGTTACTTATTAAGAGAAACTCATTTGTCTATATATTCAA GACAGTGCAAATTTGCATCATTGCTATAATAGCTGCTACTGTGTTTTTGAGGACTGAAATGCACCAAGATAGTGAAGATAATGCTTCTCTTTACATTGGT GCAATTTTGTTCTCAATGATTATGAACATGTTCAATGGTTTTGCTGAATTGGCACTCACCATTGGAAGGCTTCCAGTGTTTTATAAGCATAGGGATCATC TTTTTCACCCTGTTTGGACTTATACACTTCCTAATTTCCTTTTGAGGATTCCTATTTCCATTTTTGAGTCTCTTGTTTGGATGCTTGTTACTTACTACAC CATAGGATTTGCACCTGAAGCTAGCAGGTAAAACTCAATCACATGTTTTTTTTCCTTCATAATTTTGCATGTGGTATATTTGAAGCATTGTTTTAAATCG CCGACTACCAACAAAGCGTTAGTCTAGTGGTGTAAGGTCTCACTGGATCCCTAGAGTCAAATTGGATTCCCTGGAGGGATATTTGTTAGGAGAGGCAGCC CCGAAAAGGGTTATTTCCTACGAGGGCCTACCTTGGTTATACCAACAATTTTTTTTGTCGACCACATCATTTGATGCATTCGCAATACTGCGGTTATAGT GACTACCATAGCCGTATCATACCACAATTGCAGTGTGATACCGAATCACAATGATGTGGCTGCATTAGGCCGCAACGCAACTGCATTTGGGCCGTAACAA TTCAAACATATTTTTTAGTCACAAATTCAGCTAATGGTTACAATACGCATCATAACGACGACAATCACCTCAATCACAGTAACCGAAACCGCAATTTAAA ACCATACTGATTTGAACTCATTTATATGTGTTTATAGTAATCAACCTAATATATTTTATTCATTAAGTTGAGAAATTTTAGATGACATTATTAAGAGTAT TGTCCCCAGAGGTTTAATTTGATGCTATGATTATGATGTGATGTGATGAATTTGTATTTTGTACTAAGTGATCATTTTGATGCCTAATCCAACTTTCAGG TTCTTCAAGCAACTTTTGTTGGTATTTCTTATCCAACAAATGGCAGCTGGAATGTTTAGGGTCATTTCTGGAGTCTGTAGGACAATGATTATTGCTAACA CTGGTGGAGCCCTTATGCTCCTTCTTGTTTTCCTACTTGGAGGTTTCATCCTTCCAAAACGTGCAATTCCTGATTGGTGGGTATGGGCCTATTGGGTTTC ACCACTGTCATATGCTTTCAATGCAATGTCTGTGAATGAAATGTATGCTCCAAGGTGGATGCATGCAAATACTTCTTCTGATGGAACTACAACTTTGGGT CTTGCTGTATTGAGGAACTTTGATGTTTATGCTAAAAGAGATTGGTACTGGATAGGTGCTGCAGCTCTTCTGGGTTTCACGATTTTGTACAACGTTCTCT TCACGCTCGCGCTTATGTACCTTAATCCTTTTGGAAAGAAACAAGCAAATTTATCTGAAGAAGATGCAAATGAATTGGAGGCTGAAGGAGACTTCGATGA CGCACCTAGAATCGTAAGGCCACCTGCACCGAATAGTGAATCAGTGCTTCGATCATTATCTACTGCTGATGGAAATAAATCAAGAGAAGTGGCAATGCAG AGAATGAGCAGCCAAGCTAATCCCGGTGGAGTCAGAAATGCTGATTCAACACTCGGTTCAGCCACGGGAGTCACCCCGAAAAAAGGAATGGTTTTACCTT TTCAACCGCTTGCGATGTCCTTTGATACTGTTAACTACTATGTGGACATGCCTGCAGAAATGAGAGAGCAAGGAGTAACAGAAGATCGGCTGCAATTACT TAGGGGAGTAACAAGTGCCTTTAGGCCCGGAGTTCTAACTGCACTAATGGGAGTTAGTGGAGCTGGGAAGACAACTTTGATGGATGTTTTAGCCGGAAGA AAGACCGGTGGCTACATCGAAGGAGATATTAAAATCTCTGGGTACCCTAAGAACCAAGAAACCTTTGCAAGAGTTTCTGGCTATTGTGAACAAACTGATA TTCATTCACCACAAGTTACTATCAGGGAATCATTGCTTTACTCCGCGTTCCTTCGGTTACCTAAAGAAGTTAGTAAGGAGGAAAAGATTCAATTTGTGGA CCAAGTTATGGACTTGGTAGAACTGGATAATCTTAAGGATGCTATTGTCGGGCTTCCAGGAGTTACAGGGTTGTCAACTGAACAGCGAAAGAGACTGACA ATCGCTGTTGAACTTGTCGCTAATCCCTCGATCATTTTCATGGATGAACCAACTTCAGGTCTAGATGCAAGAGCAGCAGCTATTGTTATGAGAACTGTGA GAAACACCGTCGACACCGGAAGAACAGTTGTCTGCACAATTCACCAGCCTAGCATTGATATCTTCGAAGCCTTCGATGAGCTCCTATTGATGAAAAGAGG AGGGCAAGTGATATACTCAGGACCCTTAGGCCAGAATTCACACAAGATCATAGAATACTTTGAGGCAATTCCAGGGGTCCCCAAAATTAAGGAAATGTAC AACCCAGCAACATGGATGCTAGAAGTAAGCTCCATAGCAGCTGAAGTCCGGCTCGGAATGGACTTCGCAGAATACTACAAGTCCTCAGCTTTGTTTCAGC GAAACAAAGATCTCGTCAAGGAGTTAAGCACACCACCACCGGGAGCACAAGATCTGTATTTCCCTACTAAGTACTCTCAATCAACATTGGGGCAATTCAA GTCCTGTCTATGGAAGCAGTGGTTGACATACTGGAGGAGTCCGGATTATAACCTTGTGAGATACTTCTTTACCTTGGCTTGTGCCCTCATGATAGGAACA GTATTCTGGAGAATTGGCAGACACAGGGAGAGCTCAACTGACTTGACCATGGTTATAGGAGCAATGTATGCTGCAGTTATTTTCGTCGGAATCAACAACT GCCAAACCGTTCAACCGATAGTAGCGGTCGAAAGAACAGTTTTCTATAGAGAAAGGGCTGCTGGAATGTATGCTCCTTTGCCTTATGCCATTGCACAGGT TTTTACTGAAATACCATATGTGTTCTTCCAAACTGTATATTACTCAGTCATAGTGTATGCTATGGTGAGCTTTGAATGGAAAGTGGAGAAGTTCTTTTGG TTCTTCTT BLAST |
Tissue | pods |
Gene name | LI_gene_194282; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465599
Blastp | ABC transporter G family member 35 from Arabidopsis with 70.43% of identity |
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Blastx | ABC transporter G family member 36 from Arabidopsis with 74.2% of identity |
Eggnog | (ABC) transporter(COG0842) |
Kegg | Link to kegg annotations (AT1G15210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019429309.1) |
Pfam | ABC-transporter extracellular N-terminal (PF14510.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |