Ll_transcript_465578

• Id Trinity: TRINITY_DN52630_c2_g1_i4
• Name Transcript: Ll_transcript_465578
• Sequence: GCCACAGGAGTTGCCCCAAAAAAAGGAATGGTTCTACCTTTTCAACCGCTTGCGATGTCTTTTGATAGTGTCAACTATTATGTGGACATGCCTTCTGAAA TGAAAGAACAAGGAGTGAGTGAGGATAGGCTACAATTGCTAAGGGAAGTAACTGGTGCCTTTAGGCCTGGAGTTCTAACTGCTTTAATGGGAGTTAGTGG AGCTGGAAAGACAACGTTAATGGATGTTTTAGCAGGAAGAAAGACCGGTGGCTACATTGAAGGAGAAGTTAGAATCTCTGGCTTCCCTAAGAACCAAGAA ACCTTTGCCAGAATTTCAGGATATTGTGAACAAACTGATATCCATTCACCCCAAGTTACTGTCAAAGAATCTCTGATTTACTCGGCATTCCTTAGGTTAC CTAAAGAAGTCAGTGATGAGGAAAAAATGAAATTTGTTGAAGAAGTAATGGATTTAGTGGAGCTGAATAATCTCAAGGATGCTATAGTTGGACTTCCAGG TGTTACAGGGCTGTCAACTGAACAGCGGAAGAGGCTAACAATCGCGGTTGAGCTTGTCGCTAATCCTTCAATCATCTTTATGGATGAACCAACTTCGGGT CTTGATGCAAGAGCAGCAGCCATTGTTATGAGGACCGTGAGAAACACTGTTGACACTGGAAGAACAGTTGTATGCACAATTCACCAGCCTAGCATTGATA TCTTTGAAGCCTTTGATGAGCTTTTGCTGATGAAGAGAGGAGGACAAGTGATATACTCAGGACCTTTAGGAAGGAATTCACACAAGATTGTAGAATACTT TGAGGCGATTCCGGGAGTCTCAAAAATTAAAGACAAATACAATCCAGCTACATGGATGTTAGAGGTAAGCTCCATAGCAGCTGAAGTTCGGCTCGGAATG GACTTTGCTGAATACTACAAGACATCAGCTTTGGCTCAGAGAAACAAAGCTCTTGTAAAGGAGTTAAGTGTACCACCTCCTGAAGCAAAAGACTTGTATT TCCCTAGTCAGTATTCTCAACCAACTATGGGACAATTTAAATCATGCCTATGGAAGCAGTATCTTACTTATTGGAGGAGTCCAGATTATAACCTTGTCAG ATATATGTTTACCTTGCTTGTTGCTCTAGTGGTGGGGACTGTATTTTGGAAAGTTGGCACAAAAAGGAGTAACTCCGGTAACTTGACCACCATTATAGGA GCAATGTATGGCTCTCTCTTTTTTGTTGGTGTTAACAACTGCCAAACTGTTCAACCAGTTGTAGCTATTGAAAGAACAGTGTTCTATAGAGAAAGGGCTG CTGGAATGTATTCTGCTTTACCTTATGCCATTGCACAGGTTATTATTGAAATACCATATTGCTTTGTTCAAACCATGCTTTTCTCGTTCATAGTGTATGC TATGGTGAGCTTTGAATGGCAAGTGGCAAAGGTGTTTTGGTTCTTATTTGTGAGCTTCTTTACCTTCTTGTACTTCACATACTATGGTATGATGACTGTT TCCATTACACCAAACCACCAAGTAGCATCAATATTTGGAGCTGCATTCTATGGAATCTTCAATCTCTTCTCTGGTTTCTTTATAGCTAGACCAAAAATTC CAAAGTGGTGGGTTTGGTATTACTGGATATGCCCAATTGCATGGACAGTGTATGGATTAATAGTGTCACAATATAGAGATGTAATGGATGAAATTGAAGT GCCTGGGTGGAATTATAAGCCTATGATCAAAGACTATATCGACCTTCAATATGGGTTTAAAGCAAACTTCATGGGTCCAGTTGCTGCAGTTTTGGTGGCT TTCCCTGTCTTCTTTGCCTTTGTATTTGCCACTGGCATCAAAATGCTCAATTTCCAAACAAGATAAAACAACAATGGAGGCCAAATTTTATAATTTATGT TAGACAAAGAAATATTGTTTTTGTACCTACTTTTGAAGGATTTTAATAAATGTAATCATGGTG
• Tissue: pods
• Gene name: LI_gene_194282;
• Additional information: details;

Expression of Ll_transcript_465578

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.4
• PS2: 0.1
• PS3: 0.1
• PW1: 0.3
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465578

• Blastp: ABC transporter G family member 29 from Arabidopsis with 76.03% of identity
• Blastx: ABC transporter G family member 36 from Arabidopsis with 77.87% of identity
• Eggnog: (ABC) transporter(COG0842)
• Kegg: Link to kegg annotations (AT3G16340)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458104.1)
• Pfam: ABC transporter (PF00005.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;