Id Trinity | TRINITY_DN52633_c0_g1_i1 |
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Name Transcript | Ll_transcript_465091 |
Sequence | CAGGTTCCCACTACCAATTACCAATTTCCAAAAAGCAAAACATGCATAACCACTCACACACACCCTCTCTCTCTCTCTATATATATAATAGGAACACGCA AACACACTCCTTATGATAATAACAATAATCTGTGTTCTCTGTTTCCTTTGTGCATATTAAAGATGTTGTCTAAACACCTTCATCTGTGTTTCTTGAAGCT CAAATGTCCCTCAGCCATTAATCTATCCCAACCATCACCACCTTCCAGCACTCCTACTAATTCAACCATTATGCATTTCAGCTCAGTGGATGATGATTAT GATTATGATGATGATGATGATGATTATGATGATGACCTTCCTCCTCCACCAACAGACTTTGCCTCCCTCTTTGCCTCCCAACGCTTCTTTTTCTCATACC CTGGCACCTCCAACTCCATCATAGACTCCTCTCATACTCCACGCTACTCTGCCAACTCTCACACTAACCACAGCAACAACAACAACAAAACCAACACCTT GATGATACCGAGAGGTAGTGTGAAGGTGCCCAAGTACTCTCTGGACCCATACATTGATTTCCTACGTTCAATGCATGAAATGGTTGACTCTAAACAAGTG TCCTTGGATGTGAGAAAAGACTGGGATTATCTTCATGAGCTTCTTTTATGCTACCTCCATCTCAACCCTACACATACTCACAACTTCATTGTTCGTGCTT TCACAGACCTTCTCCTCGACCTCTTGTCTTCATCCTCATCCTCATCTTCGTCCTCCTCGCCACCTTCACCACAAGTACCGACACCATTTCATGGTTGGTC TACAAGTATAAGTACAAGGTTCTTAAATTAGGGATTATTATTTGTTTTCTTAATTATATTCATGGTTGTAAATGGGTTGTACTTACCTTATGACGGTGTG GGTGGCAAGTAGAGTTGGTTTATAGTCCTTGTGTTGGTTGGTGTGGTCCTGCAATGGTAATGGTAATGGTAACCAGCACGCATGGTACTCTACTCACGAG CATGCTCACCTTGCTTTTCCTCTTTGTGTTAGGGTACAAAGTTCATGTCCAGAAAAATGCCCTTAACTAGTTAATATGGTCAAGAGCTATGACTCAATGA TGGAGCTATGTATATTGTTGAGAGAATAATAAAATTGCGTCTTTG BLAST |
Tissue | pods |
Gene name | LI_gene_194300; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465091
Blastp | Transcription repressor OFP12 from Arabidopsis with 46.34% of identity |
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Blastx | Transcription repressor OFP12 from Arabidopsis with 43.1% of identity |
Eggnog | Pfam:DUF623(ENOG410YWPI) |
Kegg | Link to kegg annotations (AT1G05420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452002.1) |
Pfam | Transcriptional repressor, ovate (PF04844.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |