Id Trinity | TRINITY_DN52636_c1_g2_i7 |
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Name Transcript | Ll_transcript_464143 |
Sequence | AAAAGGGCAGAAAGATGAAAAATAAATTAAAAATGGAAAGGATTATGGAGAAGGATATAGAATATTAGAATGTATAAGTGTATTCCTAAAACAAAATAAA AACAACGAATCAAAAGAACTAGCATCTTAGAATTAGAAACATGTTTCGGTTTTTGTTCTAGCAGCAAGAGCGCAACAACAGCAACAACAACAGGTTTCTT AAAGAACCAAACACATTCATTCACAGGTAGCTAGTTCTTTCAAGTTCAAGGGCACAAAGACGTTGCAACTAGCTTATGCCTTTTGATACGAGTTTGATAG GGGGTGTGGCTTGAGTAAAGATGGCAGAAACAAATTCGGTTGATGTGATTTTGGACTTTCTGAGGAAGAACCGATTCACGAGAGCTGAGGCAGCTTTGCG TAGTGAGATCAATAACCATCCTGACTTAAATAGCTTCCTTCAGAAACTTACGTTGGAAGAAAATGCCTCACGTTATATGCCACAAAATGATAAGGGGAAG GTGGCTGTAGAGATTCAAGGGGTGGATTCTCGTGAAAGTGTTGATGTTTCTAAAGAACTTATTGTGAAGGAAATAGAATGTGGGACTGGTAGAAATGCAA CTGAAACCAAGTGGAAAACTTCTGCTCCTTCTATAAGTGAACGGAATAAATCAAATGAATTGGTTGGGACGAGTGACAAACACTTGACCTTTACTAAGAG TTTGGAGGACAGTACGGTTGATTTATACTCATTGAAGTCCTATCCCAGCAATGGTCCTGTGGAGCTTTACCAAAATGATGCTCATAGTCGGGCTAATAAT ATTTTGAAGGCTTCTATATCTCAACAGTCAAAATATCAAACTAAGGAAGATGTTGCTTCAGTCGCAACCAACAGTAACACTAAGCCTGGTGAGGAAAGTA CTGTGTTTGCAGCTAATAAATCCTTGTGGCTTGGAAGTAGTAGTAAAGTGTCTGTACAACCGAAGTATGACCTTGTGGTGCAAGGCAAAGAGCCGAGGGA ACATGATCTTCAGCCAAAATTTAATAGTTCATCTCTTAAAGTCAACTTTTCTGATAATCCCTGGTCTAGAACTGATGAGAATATGAATTCATCTTCCGAT CAATGGGATTGTTCTGTCAAGACTTTTTTTCCATTTCCGAAGGGGGATATGTCTACAAGCTTTGATGGTGCAGCTTATTCTGATAAAAATGAGGAAAAGA GACGGTTAGAAATTAGTGATATTAGGGCATCTATAAAGGAGCAGGTGGATGAAGTAGGGAGAGCTATTTTCTTGGGCAAGTCACAAGGAAGTTCTGAACT GAAGAACATTGGCAGCTTAAGTTTTCCTCTTGTGTCTGAAAATCAGAGGGAAGAGTTTCCTAGGCTTCCTCCTGTTAAACTCAAGTCAGAAGATAAGCCC TTGGCTGTTAACTGGGAGGAGAAGTTTGAGCGAGATGGACCAACTTCAAAATTTTCTGGTGCAGACAGCACTTTATATATTGGTTCATATTTGGATGTGC CTATTGGGCAAGAAATTAACCCTTCAGGTATGAAGAGGGCTGCAGGGGGGAGCTGGTTGTCTGTAAGTCAAGGGATAGCAGAGGACACATCTGACATTGT ATCAGGATTCGCTACAATTGGTGATGGGTTGTGTGAATCTGTAGACTATCCGAATGAATACTGGGACTCTGATGAATATGATGATGATGATGATGTTGGG TACATGAGACAACCTATTGAGGATGAAGCCTGGTTTTTGGCGCATGAAATTGATTATCCTAGTGACAATGAAAAGGGGACTGTGCACGGAAGTGTTCCAG ATCCTCATGAAAGTGGTCCTGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTATTTCTCTGGAGAGCAGTATCTTCAAGTGAGTAA TGTTGAACCAGTCACAGCTTCAGATGATCCCATTGGTCTAACGGTTACTGAAATGTATGGAAAGACTAATGATAATGATTTAATGGCTCAATATGATGGA CAATTGATTGATGAAGAAGAACTGAATCTGATGCGTGCAGAACCTGTCTGGCAAGGCTTTATCAATCAGACAAATGAACTGATCATGGTAGGAGATGGTA AGGTTTTGAATGATGGTGGAAGATCACAGCTAGAGGATGTCTGTATGGATGATGATCAATATGGTTCAGTTAGGTCTATTGGGGTGGGGATAAACAGTGA TGCTGCAGATATTGGTAGTGAGGTGCATGGAAGTTTGGTTGGTGGTAGTAGTGAAGGGGATCTAGAATATTTTTGTGATCGTTATGTTGGGGCTGGTGGC TCGAGACACTCACATCATGATTTTGATAAGAATTCTATTAGTAAATCAATCAAAGATAAGAAGAAAAATGACAAGCGTGAGTCAAATAAACATGTCACCG GGGGTGGTAAGGATGCAAAGTTGCAGATGAAAACACATGGTGATGTGAACTTCTCATTTCCCCTTTCTTCGAAAGATGACCAGATGGTTCAGGCTGCCTC TAAACAGTCCCCGTGGCCAAGTAAATGCAATGCAGATGAAACTGATGGCCGTCTTAATGCATTCGTGGGATCAGATGACATGCTTAATTCATGGAAGCGG AAGAGCAGTGATTCTTCACCCATTAAAAGTTCTAGGGATGAGAGTAATGCTAACCAAGTAGGATCCAGGAACTCTTCTCCAGCAACAGTCTCAAATTATG GATATTCTGAAAGAGAACATATCAAGCCAGAAGAGGATGAAAAGGTTGGTGTTGCACAGGAGGAAGATCTAGGAGCATCACTAGAGGATGAAGAGGCTGC TGCTGTGCAAGAGCAAGTAAGGCAAATAAAGGCCCAGGAAGAGGAATTTGAAACCTTCAATTTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAG GAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTCACTGAGTATTTGGGATCTGCTGCATTTAGCAAAGCAATACAAG CTCATGATCTGCACACAGGCATGGATGTCTGTGTAAAAATTATAAAGAACAACAAGGATTTTTTTGACCAAAGCCTTGATGAAATCAAGCTTCTCAAGTA TGTCAATAAGCATGATCCTGGAGACAAGTATCACCTTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTGATAGTATGCGAACTACTCAAA GCAAACTTATATGAGTTTCATAAATTCAATAGAGAATCAGGGGGTGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATTACCATTCAGTGCTTGGAAT CACTGCAGTTTTTGCATAGCCTCGGACTAATACATTGTGATTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGTAGGTGTGAGGTGAAGGTCATTGA TCTTGGAAGTAGCTGTTTTGAGACAGACCACCTTTCCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGGCTCCCATATGACAAG AAGATTGATATCTGGTCACTTGGCTGCATCTTGGCTGAACTATGTACTGGCAATGTAAGAATTATAGATTAATAACTTTTAGTACCAGAAATATATAACT TGAGCTATTAATTTCCCATGTCTAAAAGGTTTATACTTGTTTACTACCTCCAGTCTAAAGTTAATTTTTGCTGGAAGTTGAGGTCACCACCTAATCTTTT TTAAGCAAGGCCTTTTGTTTGTCCTCGATGATGGTATCATTTAGATGGTGAAGTTTCATGCTTAAATAAGACCATCCTTGCAATGAAATGATGTCAAGTT TTCAACTCCCCATCTGAGGGCTGTGTTGTATGTTAGTCTTCTCTGGGAACCAAGAGTACCTAAAATTCATGTTAAACCAAGGGATGTGATTATGATTATT CAAGTGTATCATTTTGTTTTAAAAATTTGCTGTTACGTTGTTAAAACCTTTGTTCAGATTATTTATTTCAAAGTGGAGAATTTTTTTCTACTTCATTCAT GGGTCAAAAGATAAATCATGAGGATACTTTGACTTTCTTTAGTTGTGTAGTTGTTATTAGTTTCTTTCCTTTGTTAATTGTATGCAACTATGCATAATTT TCTGCTACTTCTTCACTGACATTAAACTAAGTATGTTGCAGGTCCTCTTTCAAAATGATTCACCTGCCACATTACTTGCTCGTGTAATTGGGATCATCGG TCCAATTGATCAAAGTATGCTTGCAAAAGGACGAGATACATATAAGTACTTCACTAAAAATCATATGCTTTATGAACGGAATCAGGAAACCAACAGGTTA GAATACTTGATTTCGAAAAAGACATCTTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCCCATTTGCTTGAGATCAACCCGA AGAAGCGGCCTTCGGCATCTGATGCCCTGAAGCACCCATGGTTGTCATATCCTTATGAACCCATATCATCTTGAATCACAAATTTGGAAGCTTCTTTTTG GTGATAAGGCCTCTGACCCTAAGTTGGGTTAGATTCACCCTTTGTCAGGAAGGTGCCACCACCTAAACATCTTTGCTGCTTTTCATTATCTGTTTTAATG ATGAAATGGAAAGAGTTGCACCCGTTCATGTTGCTGCATAATGCATTGAAAGGTGTTTTAGTTTTGTGGGAATGCAATGCCTAGATGTATTTCAGTGAGA AACCATATGATCCTGGATGTAATTTTGGGAATATGGTATAATGTTAGGATTTTGTTTTATTTGCTTTGGTCTTGTTGGAAGGGAAAATCTTAAGATATTC TTTCTAGGCAGTTTAGGAATATTTTGTGAAATAGATACTTAGCCAATTCTTTCTTCATGGTGTTAAGGAAGGAGCATTTAGATAGCAACTGGTTTCAGCT AATGATGTAAACCATGGAGGACATCCTTTAGGTATTGGTAATTAATTAATTATTAAGTTTATGTCTGATGTTAATGTCTCTTTTTTTATTAATATAGAAC AGTCCAGCACCATTGTTTATTTCATTTTATCAGCGCAATTATGGGT BLAST |
Tissue | pods |
Gene name | LI_gene_194322; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464143
Blastp | Probable serine/threonine-protein kinase dyrk2 from Dictyostelium with 45.25% of identity |
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Blastx | Probable serine/threonine-protein kinase dyrk2 from Dictyostelium with 45.25% of identity |
Eggnog | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase(ENOG410XPET) |
Kegg | Link to kegg annotations (DDB_G0293750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432653.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |