Id Trinity | TRINITY_DN52641_c1_g1_i1 |
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Name Transcript | Ll_transcript_464422 |
Sequence | TGAACCTTTGATGGATGAGGTATTACTATTCTTTGAGCTTTTCTTGGGCTGATATTGCATTATCGTTTTCTGTATTGGTGTCATTCGAATAATTTTCTAC AGGTGTGTGACAGTCTCGAATGACAGACTGAACTAAGCGTTTAGGTTGTCTAAGCTATGGTTTTTTAGTTGTTTAAATACCCTGGACTCTCTATTTTGTA TGAGATCAACTTTCCCTGACTTTGTGGTTTTGAAGCTTCAAAATTCCAATTGTGCTAATGTTTTGAGTTGTAACAGTATCTTATGTATTGTCACCTCACA CTTAGAGCTGCTGTGGTTACAACAGGGATCAGAAAATCCAACTCCATTTCACAAACCTCCATGCTTGTGATTAGTCATTTATAATTATTTCAATGTTTTT TTATCAAGTGGCTCATACTAATTTGTGCTTTGCAGGTGATGCAAGGGCTTGAATCAGCAACAATTTGTGTGGAAGACATGGATGAGTGGTTAGGCATATT TAATGTGAAACTCCGGCACATGAGAGAGGATATTGAGTCAATAGAAACCCGTAATAACAAGTTGGTAATGCAATCAGTTAATAACAAGTCTCTGATCGAG GAGCTTGATAAGCTTCTCGAGCGATTGCGTGTCCCTTCTGAGTTCGCGGCATCTTTGACTGGGGGTTCATTTGATGAAGCTCGAATGCTTCAAAATGTAG AAGCATGTGAGTGGTTGACTAATGCCCTGCGGGGTATTGAAGCACCTAATCTAGACCCTGCATATGCAAACATGAGAGCTGTTA BLAST |
Tissue | pods |
Gene name | LI_gene_194352; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464422
Blastp | Exocyst complex component SEC3A from Arabidopsis with 83.48% of identity |
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Blastx | Exocyst complex component SEC3A from Arabidopsis with 82.91% of identity |
Eggnog | Exocyst complex component(ENOG410XQEE) |
Kegg | Link to kegg annotations (AT1G47550) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443163.1) |
Pfam | Exocyst complex component Sec3 (PF09763.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |