| Id Trinity | TRINITY_DN52641_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_464432 |
| Sequence | GACGAATTCACCCATTTTCTGGTAATGGTTTTGACAACATTATTACACCCAAAAAGTAAAAGTAAAAGTAAACGGAGTCGCATACAGCGCAGTCAACGCA AAAGGAGAGATAGAAGTGAAACCGCGAAGCATCCTTTTTATTGTTTCGCATTCTTTTCATTGTATCTGCTTTAAGAAAGCTGTGAGATCAGAATCAATGG CGAAATCGAGTGCTGACGATGTTGAGCTTCGTCGAGCTTGCGAATCTGCAATTGATGATCCAAAGCAGAAGATTCTCATTTCCATCCGTGTTGCCAAGAC TCACGGCGTTTTTGGAAAACCTTCCAAGCTTGGTCGTCAAATGGCCAAGCCCAGGGTTCTCGCTCTTTCCACAAAATCAAAGGGTCAGAGCACAACAGTT TTTCTTCGAGTTTTGAAGTATTCTACAGGAGGAGTTATTGAGCCTGCAAAACTATACAAGCTGAAGCACCTCTCAAAAGTGGAAGTTATAACTAATGATC CTAGCGGATGTACGTTTACATTGGGATTTGATAACCTTAGAAGTCAGAGCGTGGCTCCTCCTCTGTGGACAATGCGCAATATTGATGACAGAAATCGCCT CCTTCTTTGCATCTTAAACACCTGCAAAGATGTGTTGGGTCGCCTTCCTAAGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAAT AGACCCTCAGTTTCTACTCAAAGGAATGTGCAAGATGGTGGTCCTATTGCATCTGCTGTGCCTGAGACCGAATTGAAAGTCAATGTCGAAAAGGAACTTG TCTCCCAAGCAGAGGAAGAGGAGATGGAGGCCCTTTTGGGAACTTATGTCATGGGTATTGGTGAAGCAGAGGCATTTTCAGAAAGGTTGAAGAGAGAGCT CCAGGCCCTAGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTTTGATGGATGAGGTGATGCAAGGGCTTGAATCAGCAACAATTTGTGTAGAA GACATGGATGAATGGTTAGGCATATTTAATGTGAAACTCCGGCACATGCGAGAGGATATTGAGTCAGTAAGGACTTCTCCCCTTCAAAATGGGATTATAA TCTTCCTAGACCCAATTTACTTTGTGGTTGTAATTGCAGTGTTTGCTGGAATCATGGTTCATCTGTAAAGTTTTCTTTGTTCATTTGTCATGGCAAGCCA ATTTATGCATTAGTGTAGCACATATTTTTAATTTTAATGGCATAACCTCTGTTTCCCCCCTTCTATTTATAGAGCCAGGATGTAAATGATTTGGCATTAT TCCTTTTCTTTTCTCTATTATATTTATAGATCACATTTATTTGTATCTTGAAATAAACATCCGGAGTGATTACCAAGAGCAATGGATAATAATGAAGGTA TGTAGTAAGAGGAAATCCAAGCATGGAAACAAAACATCTCCCTCCTGATATTTGTGTTAGCTAGAGAACAAATACCCCTTTTTATGCGGCATAACTTCCA TTTTATCTGGAACAGAATGCTTAGTCTTTTGCTGAATCCTGGTTGGATCTGTTTAATTTATGGAACTAGCTTTAAAGAGTAGAGTAAGAAGTGAAAAGTT TCATTTCAGCATGCATTTATGTTGTTATTAAGTGTGTTCGGTAAGAGCATGATCCACACTTTTTCAAGGATATTATGTAGCATTTAGGGCATCTCTTTGC TGTTCATCTCGTGGCCTCAATCGGGGGGTTTTGAGTTCTTGAGGGATTGAGAGCTTTATTGTAGAGTTGAAATTGTTTTCTTTCCCCTTTTCTTTTTCTT GCATTTGTCATGGACTTGTGGGGTATATTTTCCACCACTTTATTGTTTTCTCTCTTTCCTAAATTCCCTTCTTTTCCTTTTTCTCAACATTATAGATTTG ATTGTTACCTGTGAAAAAGCTGGGTGCTGTGAAAGTTGCTATGTGCTTTATATGTCATTTTTCAGTTTTTTTGGGCTTGCTTCTCCAGGTTATGTAGTTG ATATAATTTTGGATCTAAGAGTTTTAAAGAAGTACTGAACCCTTTACTTTTTGTCCATACTTTTCTGATGTCCAGATAGAAACCCGCAATAACAAATTGG TAACGCAATCGGTTAATAACAAGTCTCTCATCGAGGAGCTTGATAAGCTTCTTGAGCGATTGCGTGTCCCTTCTGAGTACACAGCATCTTTGACTCGAGG TACATTTGATGAAGCTCGAATGCTTCAAAATGTAGAAGCATGTGAGTGGTTGACTAGTGCCTTGCATGGTATTGAAGCACCTAATCTAGACCCTGCATAT GCAAACATGAGAGCTGTATGTTCCCTTCTTTACTTCTCTGTTGTCAAAATTCATCTGTTAAAACAAGTTGGTCATGCTTTAGCGATTAAGGACACAAAAT TACATTTGGGATATGGAATGGCTGTTTTATTTGTCACAAAAGCATTAAGAGAAACTTTTCTAAGATGACAGGTATGATTATATTGACTAGTTTCTACTAA TTTGATTGGTCGAGAGAATCTATATGAGGTACTACAAATTTGGGATCACAAAGCAAAGAGAGAGTACTCTGGCTTTTGTCAGTATGGCAAATATGTACAA GACTTGGAAGTTCTCTTTTTTGACGGTGGTTCGTGCTTTCTCCTACAGGTTAAAGAGAAGCGTGCAGAACTTGAAAAACTAAAATCTACCTTTGTCAGGA GAGCTTCTGAATTCTTGAGAGATTACTTTGCTAGTTTGGTAGACTTCATGATAAGTGATAAAAGTTACTTTTCTCAGAGGGGACAATTGAAGAGGCCAGA TCATGCTGACTTGCGGTACAAATGCAGAACATATGCGCGTCTTCTGCAGCATTTAAAGAGTCTTGACAAGAATTGCTTGGGTCCATTGAGAAAAGCTTAT TGCAGTTCTCTAAACTTGCTTCTCCGTAGAGAGGCCCGCGAATTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCTAGAAATCCAACTGTTTGGCTTG AAGGTTCCACAGGTTCTGGTCAGAATGCAAATGCTATTGACACTTCTACAGTCTCTGATGCTTATGCAAAGATGCTCACAATTTTTATCCCACTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_194352; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464432
| Blastp | Exocyst complex component SEC3A from Arabidopsis with 81.57% of identity |
|---|---|
| Blastx | Exocyst complex component SEC3A from Arabidopsis with 81.57% of identity |
| Eggnog | Exocyst complex component(ENOG410XQEE) |
| Kegg | Link to kegg annotations (AT1G47550) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430730.1) |
| Pfam | Exocyst complex component SEC3 N-terminal PIP2 binding PH (PF15277.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |