Ll_transcript_464661

• Id Trinity: TRINITY_DN52642_c0_g1_i18
• Name Transcript: Ll_transcript_464661
• Sequence: AACTGCATACGTGTCAAACATTGAAAGCCAATGAAGAAGAAAAATCAAAGAAGAAGTAGGACACATAAGGGTCAAAGTTGGCACTTCACTTCACGGATTC ACCCTTCCCTTCTTACAAAGGGACACTATCCTTAATCCCCTATCCTCTTTCTCCTGTTGTGTCTGCTCATACTTCTCTCTCTCTCTTCTCTATATAAACT CATTCTTTCTAACTTCATTTCACTCATTCTTCTTTCTTCTCTCCATTTTTATTATCACTTTTTTGAGACATCACCAATTCACCATGATGTTGTCTATTAA ACGTGCTGCTTCCACTACCGTTCGATCCATCACTTCTTCAATTTCCTCTCCCACTTTCTCCAGAAACCTTCATGCCTCTGGTGGAAGGAAGAAGATTGTG GGTGTTTTCTACAAAGGGAATGAGTATGCTTCCAAGAATCCTAACTTTGTAGGCACTGTTGAAGGAGCCCTCGGCATTCGCGAGTGGCTCGAATCACAGG GTCATGAGTACATTGTCACTGATGATAAAGAAGGACCTGATTCTGTACTTGAGAAACACCTTCCTGATCTCCATGTCCTCATCTCTACTCCGTTCCATCC GGCCTATGTCACAGCAGAAAGAATCAAGAAAGCTAAGAACTTAGAGCTGCTTTTGACGGCTGGCATTGGATCTGATCACATTGATCTTAATGCGGCTGCT GCTGCTGGATTAACTGTTGCAGAGGTCACAGGAAGCAACGTGGTGTCGGTTGCAGAGGACGAACTCATGAGAATTCTCATTCTAGTGAGGAATTTCTTAC CCGGGTACCATCAGGCCGTTAATGGAGAATGGAATGTGGCTGGAATTGCACATAGAGCATATGATCTTGAAGGAAAGACTATAGGCACGGTTGGCGCTGG ACGTATTGGCAGGCTCTTGCTCCAAAGGTTGAAGCCTTTTAACTGTAATCTTCTGTACCATGATCGTCTTCAGTTGGACCCTGAGTTGGAGAATCAACTC GGAGCTAAGTATGAGGAGGATCTTGATGCAATGCTTCCAAAATGTGATGTACTTGTCATCAACACTCCTCTCACCGATAAGACAAGGGGATTGTTTGACA AAAATAGAATTGCAAAGTGCAAGAAGGGTGTCTTGATTGTTAATAACGCGCGAGGAGCAATCATGGATGCACAAGCAGTTGCTGATGCAAGCTCTAGTGG ACATATTGCAGGTTATAGTGGCGATGTTTGGTTCCCACAACCGGCTCCAAAGGATCACCCGTGGCGCTACATGCCAAACCATGCGATGACTCCTCATATT TCTGGTACCACCATTGATGCACAGCTACGTTACGCCGCCGGCGTCAAAGACATGCTTGAGAGGCACTTCAAGGGCGAAGATTTTCCAGAGCAACACTACA TTGTGAAAGAGGGTCAACTCGCAAGCCAATACCGTTGAAGTCGTGTGTATTAAGCGTTCGTCTTCCATTGTTAAGGTCATTGTTGGACCACATATGCAGG AAGGAACTCAATAATGAACGCTTGAGTTTGAACTTGTTTAGTTTGTGTGAAATAAAACCAAAATGAATGCTTTAGTATTCAAGAATGGTCAATGTTTTTT TGTTGTTGGGAATTTGAGTATATTGTTTGCTGTGCATCTTAGCATTGAATAAGATATGCTCATAAGGGAAATTAACTATAGTAGCATTTTGTTTCACCCT AAAATTGGAATACATATTTCTTAATTGGCATTTTGAAGGCTTAAATCACTTATTGTTTATTGGCAGGTGATAGAGTAAAATTTGTTGGTAACTTCCCTTC TGCTGTCTCATCGCTACAGAGTTATCCTTCAAGGGGACCAAACTATGGTTCCAGGGGTAAAGTTCTCCTTGCTTTTGAAGATAACGGGTCTTCAAAAATC GGAGTCAGGTTTGACAAACCAATTCCAGATGGTAATGATCTTGGAGGCATTTGTGAAGTTGATCATGGATTCTTTTGTTCTGCAAATCATTTACTACGAG TAGATGGTACTGGAGGAGATGACATTGACAAACTTGCAATTAATGACATCTTTGAGGTTGTTTATAATCAGAGTAAAAGTGGTGCTCTAGTGTTGTTCAT TAAGGACATAGAGAAGGCAATGGTTGGTAATTCTGAAATTTTGAAAAGTAAATTTGAAAACTTGCCACAGAATGTTGTTGTAGTTGGCTCGCATACCCAG CTAGACAACCGTAAGGAAAAGACCCATCCAGGAGGCCTTCTATTTACAAAGTTTGGGAGCAATCAGACAGCACTACTCGATCTTGCTTTTCCTGATAACT TTAGTAGACTGCATGATAGGAGCAAAGAAACCCCCAAAGTAATGAAGCAAGTTAATCGCCTTTTCCCAAACAGGGTGACAATACAACTGCCTCAGGATGA GGCTCTACTTTCTGATTGGAAACAGCAACTAGAGCGCGACATTGAGACTATGAAAGCCCAGTCCAATGTTATCAGCATTCGCTCAGTTCTCAACAAGATT GGATTGAATTGCTCTGACATCGAGTCACTTTGCATCAAAGATCAAACCCTAACAACCGAAAGTGTGGAGAAGATAATTGGCTGGGCTATAAGCTACCATT TTATGCAGTCATCTGAGCCTTCTAACAAAGACTCCAAGCTTGTGATATCTGCAGAAGGGTTATTGATTTTTTCTCCATATCTGTCATGTGAACTTTGAAA ATTGAGCAAGGAAAATAACTTATCCAGCCTTATTTTTTTTGTAACACTTCTACATTTCATTGATGCAGCATTAAATATGGGCTAAATATTCTACAAGGCA TTCAAAATGAAAACAAGAGCTCAAAAAAATCACTTAAGGATGTGGTAACTGAGAATGAATTTGAGAAAAAACTGCTTGGTGATGTTATTCCACCAACTGA TATTGGGGTCACATTTGATGATATTGGAGCTTTAGAGAATGTAAAAGATACCTTGAAGGAATTGGTTATGCTTCCTCTTCAAAGACCTGAGTTGTTTTTC AAAGGTCAATTGACAAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCACCTGGCACTGGAAAAACAATGCTTGCAAAGGCTGTAGCAACTGAGGCTGGGG CAAATTTTATAAATATTTCAATGTCCAGCATTACTTCTAAGTGGTTTGGTGAAGGGGAAAAATATGTTAAAGCGGTCTTTTCTCTGGCCAGCAAAATTGC TCCAAGTGTTATTTTTGTTGATGAGGTTGATAGTATGCTAGGGAGACGTGAAAA
• Tissue: pods
• Gene name: LI_gene_194357;
• Additional information: details;

Expression of Ll_transcript_464661

FPKM

• PAB: 0.5
• PNAB: 0.4
• PS1: 0.1
• PS2: 0.7
• PS3: 0.3
• PW1: 0.6
• PW2: 0
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_464661

• Blastp: Formate dehydrogenase, mitochondrial from Solanum with 82.2% of identity
• Blastx: Formate dehydrogenase 1, mitochondrial from Oryza sativa with 87.04% of identity
• Eggnog: Dehydrogenase(COG1052)
• Kegg: Link to kegg annotations (102577429)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433134.1)
• Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (PF00389.29)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;