| Id Trinity | TRINITY_DN52642_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_464648 |
| Sequence | AACTGCATACGTGTCAAACATTGAAAGCCAATGAAGAAGAAAAATCAAAGAAGAAGTAGGACACATAAGGGTCAAAGTTGGCACTTCACTTCACGGATTC ACCCTTCCCTTCTTACAAAGGGACACTATCCTTAATCCCCTATCCTCTTTCTCCTGTTGTGTCTGCTCATACTTCTCTCTCTCTCTTCTCTATATAAACT CATTCTTTCTAACTTCATTTCACTCATTCTTCTTTCTTCTCTCCATTTTTATTATCACTTTTTTGAGACATCACCAATTCACCATGATGTTGTCTATTAA ACGTGCTGCTTCCACTACCGTTCGATCCATCACTTCTTCAATTTCCTCTCCCACTTTCTCCAGAAACCTTCATGCCTCTGGTGGAAGGAAGAAGATTGTG GGTGTTTTCTACAAAGGGAATGAGTATGCTTCCAAGAATCCTAACTTTGTAGGCACTGTTGAAGGAGCCCTCGGCATTCGCGAGTGGCTCGAATCACAGG GTCATGAGTACATTGTCACTGATGATAAAGAAGGACCTGATTCTGTACTTGAGAAACACCTTCCTGATCTCCATGTCCTCATCTCTACTCCGTTCCATCC GGCCTATGTCACAGCAGAAAGAATCAAGAAAGCTAAGAACTTAGAGCTGCTTTTGACGGCTGGCATTGGATCTGATCACATTGATCTTAATGCGGCTGCT GCTGCTGGATTAACTGTTGCAGAGGTCACAGGAAGCAACGTGGTGTCGGTTGCAGAGGACGAACTCATGAGAATTCTCATTCTAGTGAGGAATTTCTTAC CCGGGTACCATCAGGCCGTTAATGGAGAATGGAATGTGGCTGGAATTGCACATAGAGCATATGATCTTGAAGGAAAGACTATAGGCACGGTTGGCGCTGG ACGTATTGGCAGGCTCTTGCTCCAAAGGTTGAAGCCTTTTAACTGTAATCTTCTGTACCATGATCGTCTTCAGTTGGACCCTGAGTTGGAGAATCAACTC GGAGCTAAGTATGAGGAGGATCTTGATGCAATGCTTCCAAAATGTGATGTACTTGTCATCAACACTCCTCTCACCGATAAGACAAGGGGATTGTTTGACA AAAATAGAATTGCAAAGTGCAAGAAGGGTGTCTTGATTGTTAATAACGCGCGAGGAGCAATCATGGATGCACAAGCAGTTGCTGATGCAAGCTCTAGTGG ACATATTGCAGGTTATAGTGGCGATGTTTGGTTCCCACAACCGGCTCCAAAGGATCACCCGTGGCGCTACATGCCAAACCATGCGATGACTCCTCATATT TCTGGTACCACCATTGATGCACAGCTACGTTACGCCGCCGGCGTCAAAGACATGCTTGAGAGGCACTTCAAGGGCGAAGATTTTCCAGAGCAACACTACA TTGTGAAAGAGGGTCAACTCGCAAGCCAATACCGTTGAAGTCGTGTGTATTAAGCGTTCGTCTTCCATTGTTAAGGTCATTGTTGGACCACATATGCAGG AAGGAACTCAATAATGAACGCATGAGTTTGAACTTGTTTAGTTTGTGTGAAAATAAAACCAAAATGAATGCTTTAGTATTCAAGAATGGTCTGTGTTTTT TGTTGTTGGGAATTTGAGTATATTGTTTGCAAATTGCAATGCATCTTATATCTGTGTCTTTCATTTTCCATTTTCCATTGAGAAAAAACCTATATGAATG TTATATCATTTTACTAAATTAGTCGATAAATTATTATATCCATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194357; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464648
| Blastp | Formate dehydrogenase, mitochondrial from Solanum with 82.2% of identity |
|---|---|
| Blastx | Formate dehydrogenase 1, mitochondrial from Oryza sativa with 87.04% of identity |
| Eggnog | Dehydrogenase(COG1052) |
| Kegg | Link to kegg annotations (102577429) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433134.1) |
| Pfam | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (PF00389.29) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |