| Id Trinity | TRINITY_DN52643_c1_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_464812 |
| Sequence | GTTTGCATCTGAATAATACTTTGTTTTTGTTCTATTATTCGCAGAAAGGATTTATGACTTTTTGGCTATGATAATATTCTGATGTATCTAATCTGAAAAC AGTCCATTCGAGCTTTTGCTGAGGCATCGATGAACTTTGCTTACCAAAAAAGATGGCCTCTATATCTTAGCACTAAAAATACCATTTTAAAAAAATATGA TGGAAGATTCAAGGACATTTTTCAAGAAGTTTTTGATGCTCAATGGAGTCGCAAGTTCAAAGATGCGGGGATATGGTATGAACACCGTCTTATAGATGAC ATGGTTGCATATGCTGTTAAAAGTGATGGAGGTTATGTATGGGCCTGCAAGAATTATGACGGGGATGTGCAGAGTGATTTCTTAGCTCAAGGCTTTGGTT CTCTTGGATTGATGACTTCAGTGCTGGTATCACTTTTCTAATCCTTTGCAGTATTTCTCTTTTCTTTCAATGACCCTTAATGTTTTTTCTCTCTTCCATT CTTCCTTTGGGTACTTTTTTAGCATTAAGGTTCAAGAAACTAAATTTGGTAACAGGTTTGCCCAGATGGGAAAACCATTGAATCAGAAGCAGCCCATGGC ACTGTCACCCGTCATTATCGTGTTCATCAGAAGGGAGGTGAAACCAGCACTAACAGTATAGCATCAATTTTCGCCTGGTCCCGAGGTCTTGCTCATAGGG CAAAGTTAGACGGAAATGCTAGACTATTGGACTTTACGGCGAAACTAGAAGCAGCTTGTGTTGGAACAGTTGAAACCGGAAAGATGACAAAGGATCTCGC ACTTCTTGTTCATGGACCTAAGGTTTCTAGGTCCCAGTATTTGAATACTGAAGAGTTTATTGATGCTGTAGCTGAGGATCTTAGAACAAGACTATATACA AAAGCAAGGATGTAAAAGCTCAAGTTGAATGCTGGTGCATGCAAAGATGTGTGACATATAGTTAAAGTTTATTTGGAAAATAAAATAAATTTTGTGAGAT TTTTTACCACTAGATATTATATATACTATAAAAAAATAACATGTAGACATGTAACTTTTTAAGTGTTATGTGACAAGTAATTTTATATAAGATTTAATAG CCATGATTTTGACCTAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194362; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464812
| Blastp | Isocitrate dehydrogenase [NADP] from Solanum with 87% of identity |
|---|---|
| Blastx | Cytosolic isocitrate dehydrogenase [NADP] from Arabidopsis with 71.7% of identity |
| Eggnog | isocitrate dehydrogenase (NADp)(COG0538) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431246.1) |
| Pfam | Isocitrate/isopropylmalate dehydrogenase (PF00180.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |