Ll_transcript_464820

• Id Trinity: TRINITY_DN52643_c1_g2_i9
• Name Transcript: Ll_transcript_464820
• Sequence: CTATAACTTCACTGGTGCTGGAGGCATAGCTTTGTCCATGTATAATACTGATGAGTCCATTCGAGCTTTTGCTGAGGCATCGATGAACTTTGCTTACCAA AAAAGATGGCCTCTATATCTTAGCACTAAAAATACCATTTTAAAAAAATATGATGGAAGATTCAAGGACATTTTTCAAGAAGTTTTTGATGCTCAATGGA GTCGCAAGTTCAAAGATGCGGGGATATGGTATGAACACCGTCTTATAGATGACATGGTTGCATATGCTGTTAAAAGTGATGGAGGTTATGTATGGGCCTG CAAGAATTATGACGGGGATGTGCAGAGTGATTTCTTAGCTCAAGGCTTCGGTTCTCTTGGATTGATGACATCAGTACTGGTATCTCTTTTCTAATCCTTT CCTGTGTTCCTCTTTTCTTTCAATGACCCTTTATGTTTTCCTCTCTCTTCCATTCTTCCTTGGTTACATTTTTAGCATTGATGTTCCTGAAGATAAATTT CGTAACAGGTTTGTCCAGATGGGAAAACCATTGAATCAGAGGCAGCTCATGGCACTGTTACCCGCCATTATCGGGTTCATCAGAAGGGAGGTGAAACCAG CACAAACAGTATAGCATCAATTTTTGCCTGGTCGCGAGGTCTTGCACATAGGGCAAAGTTAGATAGAAATGCTACATTGTTGGACTTCACAGAGAAACTG GAAGCAGCTTGCATTGGAACAGTTGAATCAGGAAAGATGACAAAGGATCTTGCTCTTCTTGTTCATGGACCTAAGGTTTCTAGGTCCCAGTATTTGAATA CTGAAGAGTTTATTGATGCTGTAGCAGAGGATCTTAGATCAAGACTATCTACAAAAGCAAAGCTGTAAGCTCAACATGAATGCTGGCTTTGTAATAATTC CAATAAATGCTTACCTCCAATGGCTTCAGCTCATTTGTGATGGCTTATGCCTTTTTCCATTTTCTTTTTATTTATACCTTAGATTTTAACTATTATCATT TTTTTTTTATTATTTTTAAACTGGTGCATGGAAGATCACTGACATACAGTTAATTTTATTTGGAAAATAAAATAGATTCAATGAGAATTTGTATGTTATT CTGTGTAGAGTATATCAAATGAGTTGGTGGTTTATTGTGGTAGGAGCACATCTTAACC
• Tissue: pods
• Gene name: LI_gene_194362;
• Additional information: details;

Expression of Ll_transcript_464820

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 0
• PS2: 0.3
• PS3: 0.2
• PW1: 0.4
• PW2: 0
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_464820

• Blastp: Isocitrate dehydrogenase [NADP] from Solanum with 87.4% of identity
• Blastx: Isocitrate dehydrogenase [NADP] from Nicotiana with 72.7% of identity
• Eggnog: isocitrate dehydrogenase (NADp)(COG0538)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424646.1)
• Pfam: Isocitrate/isopropylmalate dehydrogenase (PF00180.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;