Ll_transcript_463221

• Id Trinity: TRINITY_DN52651_c0_g1_i6
• Name Transcript: Ll_transcript_463221
• Sequence: GAGGAATTAACGTGAGTGGTGAATCTTGTTCTTCACAAAGTTTAGAGTGTACTGCACCCATCATACCCTTTTCTCCAAAGATCAAATCTTTTCAACACAT TTGGCTAATCGAAGGCCAATCCTTACCATCTACTGTGAACCCTTCTGGAATGTGGTTTGGGCTTCAAGTAGATGCCTGACAATGTGGACCCTTTTCACGA TTTCATCAACTCAACTTGGAGGGTTTGTTCTCTTCTAGGTGGTTTTGTTTCTGGTTTAATATCAAAGCCTTATACAAAATTGGTTGGCTCAGCCTTTCAT GGTTCTCTTTCAAGTTTGTCCGAGGAAAGAGAAAATTGTAATTTTAAGTTCATGGATAATTATATTTGTCTTAGTTCATCGGATGACGACCTAGAGGAGA TAGAAGATCCAAGGAGGTCTCTCCCACAATGGGATGCTCCTGAAAGGAATTCAGATAATGGCTGGTGGTCTAATCTGGGTAGTAGTTCTTCAAGAGGAGC AAATACTTCAAATAATCATTCACAAATCAAACCTCATACTCAACCCTCTTCTAGCAACAATTCACTGAATCGCAGAGTTGCACAAAGGGATGAACCTTCC TATCATACCCAGAATGGAAACTCAAGTCAGATTCAGATAGTCAACACACAAATTTCTAACACTTCTGGTTCTGATCATGAGAAAACGCCATCTCAACACA CTTTCAAGAGGAACCTTCCATTGTCTCTTCAGCCATCAGTAACAAAAGGTCTTTCATCTTCGTCATTTGTGTCAGATATCAGATCAAACAATTTAAAAGA TCACACTAGCAGCAGTCAATTTCATGATACATATAAGAATCATCGCCATGCAGTGGGGTCTAGCATGACCGGTGACAAGAGCTACCGACGTGACAATTAT AACAGGGTAAATGATGAAGATCGTTTTATGTTTCCAAATGGTGGGAGTAGAATTCTTCCTTCATCTTTGGCACATGGAAAGGCTATAAATTCTCAGTTCA CCAGTTCCACTGAAGCCGCATACCGTTCTGGAGCAGTTGATGAAAGGGCTTCTGCAACTGACGAGAGACTTATTTATGAGGCAGCATTACAGGATCTCTA TCGATCAAAGACGGAAACAGATTTACCTGATGGTCTAATGTCTGTCTCTCTTCTGAGACATCAGAAAATTGCATTAGCTTGGATGCTTCAGAAGGAAACA AGAAGTTTGCATTGCTTGGGGGGTATTTTGGCCGATGATCAGGGCCTTGGTAAGACAATTTCGATGATTGCCCTTATCCTAATGCAGAAGTCATTGCAGT CAAAATCAAAAACAGATGATGCCTGCAATCATAAAACTGAAGCTTTGAATTTGGACGACGATGATGATAATGGTATTGTTGATGTGGATAATGTTAAAAA AAATGATGAATCTGATGATATAAAACCTACCACAGAACCAAGCAGTTCGACACGGGCACCAAGTAGGAAAAGGCCTGCTGCTGGTACGCTGGTTGTGTGC CCTGCAAGTGTTGTTCGACAGTGGGCCAGGGAGCTTGATGATAAAGTTGGAAATGAGAAGCTTTCTGTTTTAATTTATCATGGGGGCAGTAGGACAAAAA ATCCTGATGACCTCGCAACATATGATGTGGTTATCACAACATACGCTATTGTGACTAATGAAGTTCCAAAGCAACCGTTAGTGGACGAGGATGAAATTGA TGAAAAAAATGATGAAAGATTTGGGTTATCTTCTGTGTTTTCTGCAAGTAAAAAGAGGAAAAAGGCATACAATGGAAATAAGAAGAGCAAAAAGGGTAGA AAGGGAATTGACAGCTCTCTCGACTGTGGTTCTGGTCCTCTTGCAAAAGTAGGTTGGTTTAGGATTATTCTAGATGAAGCTCAAACAATCAAGAATCATA GAACTCAGGTGGCTAGAGCTTGCTGCAGCCTTAGGGCCAAAAGAAGGTGGTGCTTATCTGGAACACCTATCCAAAATACTATTGATGATCTGTATAGCTA CTTTAGGTTCCTAAGGTATGACCCTTATGCTGTATATAAATCATTCTACAATACAATTAAAGTTCCAATATCCAGAAATTCTATCCACGGTTATAAGAAG CTTCAAGCAGTCTTGAGGGCCATAATGCTGCGTCGTACAAAAGGTAATTTTTCGTTCTCTAAGAATGTATTTGCTGATTTCCTGACCGGATAGATTGTAT GCATTTACTTTTTTCCTGGCTTGGCATAGGTTCAGTGCCCCTTTAATATTCTCGCTGATCTCTTCTCAGGATTGTCATTTAAATTATCTTTTGTAATTTC TTTTCATTTCTTGTCCAACCTTTGTTAGTACCGCTCCAGTATCAGCAAGAGGAACCTTCTGAAGCCAAAGTGCCTACCCAACCACATAAATTTTTCTCTA TTTTTTGGCTAATTTTTCATATCCTTTTTAATGATGGAGTTATTCCTCCAATTCAATGAACCCATGCTTTAATTCTTTTACCATACACACAATATTTGCT TGGTTGAGGGATTGGACGGAACATTTCAGCCTTTAAGGTTTTCATTTGTTTACTGGAGCTAGAGTTTCCTTGAAACTGAAGTTGGAGTCAAATATACTGC ACGGGATAAGTATGTGTTTTGCTTGTTTTATAATATCAATTTTACACTTGTGCATTTGTTTAGGAACTTTGATCGATGGGCAGCCAATTATCAATTTGCC CCCTAAAACAATTGAGCTGAATAAGGTGGTTTTCTCTGGTGAGGAGCGGGCCTTCTACACCAAGTTGGAAGCAGATTCACGTTCTCAATTTAAGGCATAT GCTGCTGCTGGCACAGTGAACCAGAACTATGCAAATATCCTTTTAATGCTTTTACGACTCCGTCAGGCTTGTGACCACCCACTCCTTGTTAAAGATTATA ATTCCAATCCTGTCGGACAGGATTCTATTGAAATGGCAAAAAGGCTTCCAAGGGATTTGCTCATTAATCTATACAAGGAATTGGATACAAGCTCTGCTAT CTGCCATGTTTGCAATGATCCACCTGAAGACCCTGTTATTACTATGTGTAGCCATGTCTTCTGTTATCAATGTGTATCAGACTTTTTGACAGCTGATGAT AATACGTGCCCCGCAACTTATTGTAAAGAAACAGTCGGTGAAGATGTTGTTTTCTCGAAGGCTACTTTGAGAAGCTGCATCTCTGATGATCTTGATGGCA GTAGTTCCTCAAATTCGCATCATGTTGATTATTCACTATTTCAAGATAGTGAGTACAATTCATCTAAAATCAAAGCTGTCCTTGAGATTCTTATGTCAAA TCGTAAAATGAAGGCTCCTAGTTCTGGCTCACCAAATACCTCTGGAGGCCGTGGAGATTTACTGTCTTCTGATGTTTTATGTGTTGAAGATTGCGATTCA GATGTTCAGGTTACAAAACATACAAAAAGATATTCAGAGCCTGCGACTGAAGGACCAATAAAGGCAATAATTTTTTCCCAGTGGACTAGTATGTTGGACT TAGTCGAGGATGCATTGAAGCAATCTCGAATTCGTATACGATACAGGAGACTTGATGGTAGGATGACTCTACTTGCAAGGGACAAAGCTGTTAAGGATTT TAATACCGATCCTGAGGTAACCGTTA
• Tissue: pods
• Gene name: LI_gene_194435;
• Additional information: details;

Expression of Ll_transcript_463221

FPKM

• PAB: 0.1
• PNAB: 1.8
• PS1: 1.2
• PS2: 1.1
• PS3: 0.5
• PW1: 1.2
• PW2: 0.7
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_463221

• Blastp: Helicase-like transcription factor CHR27 from Arabidopsis with 48.57% of identity
• Blastx: Helicase-like transcription factor CHR28 from Arabidopsis with 56.04% of identity
• Eggnog: Transcription termination factor, RNA polymerase II(ENOG410XPDU)
• Kegg: Link to kegg annotations (AT3G20010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427503.1)
• Pfam: SNF2 family N-terminal domain (PF00176.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;