Ll_transcript_465249

• Id Trinity: TRINITY_DN52655_c0_g2_i1
• Name Transcript: Ll_transcript_465249
• Sequence: GAGAAATAGGTCCATTCACATTTTTCACTTTCAATACTCTGAACCCCAAAACCAAAAAAAGAGTCTTTTTTTTTTCAAAAAAAGTGCGTAGGGTTTGACC CAAAATTGCACACAATCATGATTCGGACAAGTTTCATCTTCTTCTGAAATATCCACCCTTCATTTGTTCCCGAAAATCACGTTTTTTTAGAGAGAGAAAA TCGGTGTCCGCTTCAGCTATGAACAGAGAGAAAAAAGTGAAAGCATGATGATGCCTTTTTAATTCAAAAAAAGTTTGGGTTTTTCTTGAATTTTGGAGGG ATCTGAGTTCTACATGCAATCTGGTGGCAGTGGTGGTGGTGGTGGCCGAAACCCTGGCGTGGGGTCGGCGGGCCGAGCAGCATCGTCTCCGGCAGCTGCT TCGCCGTCTTCATCGTCTCCGGCATCACAATTAGGGTTAGACTCATTGCATCAGCAGCAGCTAGGTTCTAGACAGTCATTCCAACAGCAACTACACAGAA AACCTGAAGGGAATGAATCCTTTTTAGCTTATCAAGCGGGAGTTCAAGGGGCATATGGGAGTAACAGTTTCCCATCTTCTAGTGGCATGCATCTGCCTCA GCAACCTCGTAAATTCATTGATTCAGCTCAACATGGTTCCAACCAGGATGCCCAGCTAAGAGGTCAAGGTGTTGAGCAGCAAATGCGAAATCCTGTTAAT CATGCATATCTTCAATATGCTCTCCAGGCACAACAAAAGTCTGCGACGGGAATTCAGTCACAGCAGCATTCTATGATGGCAATGGTAAACCCGTCACTTC TGAAGGGTCAGGAAATGGGTTCGGGTAATTTGAAAATGCAGGACCTTATGTCTATGCAGGCAATGAATCAAGCGCAAGGATCATCATCCTCTAGGAATTC ATCTGAACATGTTGGCCGTGGAGAAAAGCAGATAGAGCAAGGACAGCATATAGCACATGATCAAAAGAGTGATGGAAAACCTTCAAACCAGGGACCAGCC ATCGGTTACTTAATGCCTGAAAATATGATAAAATCAATGCAAGCACCAGAAACTCAGCAAGGCATCCAAAATGCTATGAACACCCAGATTGCAATGTCTG CTCAATTGCAGGCTGTACAGGCATGGGCTCGAGAACGTAATATTGATTTGTCACATCCTGCAAATGCTAGCTTAATGGCACAACTAATTCCACTGATGCA GTCAAGGATGGTCCCTCAACCAAAGGCCAACGAGAGCAACGTTGGTGCTCAGTCATCTCCTGCCCCTGTTTCAAAGCAGCAGGTTAATTCTCCAGCAGTT GCAAGTGAGAGCTCAGCGCATGCCAATTCATCAAGTGATGTGTCCGGGCAGTCAGGTTCTTCAAAAGCAAGGCAGACAGTTCCACCCAGCCATTTTGGCT CAACAACAAATCCTGGTATACCCAGCAACTCCAGCGACATGGTAGTGCAGCAATTCAGTGTTCATGGCAGAGAGTCTCAAACTTCTTTGAAGCAACCAGT AGTATTTGGGAACGGAATTCCCTCTATGCATACTCAGCAGTCTTCTTCCAATGTGAACTTGAATGCAGATAATCCGTTGAATGCAAAAACTTCATCATCT GGTCCAGAACTTCCACAAATGCAGCACAGCAGGCAGTTAAACCAATCTGCTCCTCAGGCTGGAGGCCAACCTAATGAAGGGGGTTCAGGAAAATTTGCTA GATCTCAAGGGTCACCGGCTCAGATGGCTCAACAACGAAGCGGGTTTACCAAAAAACAGCTTCATGTTCTAAAAGCACAGATACTAGCATTTAGGCGGCT GAAGAAAGGAGAAGGTACTCTACCCCAAGAACTTCTTCGGGCTATTGCTCCACCTCCTCTTGAGATGCAGATGCGACCCCCAAATCATCCTTCTGGAGGA CAAATTCAAGACAAATCTACTGGAAGTATCATGGCTGAACAACCAAGGCACGTTGAGTCCAATACGAAGGATTCACAATCTTTCCGTGCTGTTAATGGAC AGAGTTCTTTAAAGCAGGAATCATTTGGCAGAGATGAGAAATCCACTATGTCATCAGTTCATATGCAAGCTGTTGTGCAATCTGCGTCAAAGGAATCTGC GCCAATGTTATCTGCTGGAAAGGAACAGCAGAAGTCAATGGCAAGCTCTGCTAAGTTAGACCAGGACAGTGAACATGGAAATAACAGAACTCCTGTTAGG AACGAGTTAGCATTAGATAGGGGAAAGGCTGTTGCACCACAGCCTTCTGTTTCTGACTCAATTCAAACGAAGAAACCTGCACAAGCAAGCACTGTCTCTC AGCCAAAGGATGTAGGATCCACTGGAAAATATCATGGACCCCTATTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCTTTGGGTCCTCGATGATGGT AAACAATAACAATAATATGTCATTGGCATATGATGTCAAAGAGATTCTTTTTGAGGAAGGCATGGAAGTACTTACCAAGAAACGGACAGAAAATCTAAAG AAGATCGAAGGTTTATTAGCAATAAACTTAGAGAGGAAAAGAATTAGACCTGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGCTTCACCTTTTAG ATTTTCAAGCACGTTTAAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAGGTTGTGTGATCG TCAGCGTATGGAGCTTGCTAGACAAGTGCAGTCATCTCAGAGAGCTTTGAGGGAGAAGCAACTCAAATCTATTTTTCAGTGGCGTAAGAAGCTTCTTGAG GCACATTGGGCTATTCGTGATGCCCGTACTGCTCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGAGGGAGTTCTCAAAACGTAAAGATGATG ACAGGGACAAAAGGATGGAAGCGTTGAAAAACAATGATGTTGACCGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATGCCTGGTGATGCTGCAGA GAGATATGCTGTTCTTTCATCTTTCTTAAGCCAAACAGAAGAGTATCTACATAAATTAGGAAGTAAGATAACAGCTGCCAAAAATCAACAGGAAGTGGAA GAGGCAGCAAAAGCTGCTGCAGCTGCAGCACGGTTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAACTTGTGCCGGAGAGGAAATGATGATCA GAAATCATTTTATGGAAATTAATACTCCTAGAGACAGTTCATCTGTTAACAAGTACTACACTCTTGCTCATGCTGTGAATGAAACGGTCATAAGGCAACC ATCAATGTTACGAGCTGGAACATTGAGAGACTATCAGCTTGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAACAAGTTGAATGGAATTTTGGCGGAT GAGATGGGTCTTGGCAAAACTGTGCAGGTTATGGCATTGATTGCCTACTTGATGGAATTTAAGGGAAACTATGGGCCACATCTTATAATAGTCCCAAATG CTGTTTTGGTTAACTGGAAGAGTGAGCTTTATAATTGGTTACCATCTGTGTCATGCATCTATTATGTTGGAACAAAGGATCATAGGTCAAGATTATTTTC TCAAGAGGTTTCTGCTATGAAATTTAATGTCCTTGTGACGACTTATGAGTTCATCATGTATGACCGATCAAAGCTTTCAAAAATTGATTGGAAGTATATC ATAATTGATGAAGCACAGAGAATGAAGGATAGAGATTCGGTTCTTGCCCGTGATCTTGATAGATATCGTTGTCAAAGACGCCTTCTTTTGACAGGAACAC CATTACAGAATGATTTGAAGGAACTCTGGTCCCTTTTAAATTTGCTTCTTCCTGAGGTGTTTGACAATAAGAAAGCCTTTAATGACTGGTTCTCGAAACC ATTTCAAAAGGAAGCTCCTACTCCAAATGCAGAGGATGATTGGCTTGAGACGGAGAAGAAAGTTATTGTTATCCATAGACTTCATCAGATTCTTGAGCCT TTCATGCTCAGACGTCGTGTCGAAGATGTTGAAGGTTCTCTTCCACCAAAGGTCTCGATAGTTTTAAAATGTAAAATGTCCGCGGCCCAGAGTGCCATTT ATGACTGGATTAAATCAACAGGAACCCTTCGTCTTGATCCTGAGGATGAGATGTGTAAGGTTCAAAAGAATCCAGTTTACCAGATGAAGCAATATAAAAC TTTAAATAACAGATGCATGGAGCTTCGTAAAACATGCAACCACCCACTGCTTAACTATCCATTCTTCAGTGACTTATCTAAAGAGTTCATTGTAAAATCT TGTGGAAAATTGTGGATCCTGGATAGGATCCTTGTAAAACTTGAAAGAACTGGTCATCGGGTGCTACTGTTTAGTACCATGACAAAACTCCTTGACATTT TGGAAGAATACCTGCAGTGGCGAAGACTTGTGTTCAGAAGAATAGATGGGACAACTAGTTTAGAAGACCGTGAATCAGCTATAATGGACTTTAATAGCCC TGATTCAGACTGTTTTATTTTCTTGCTTAGCATCCGAGCTGCTGGGCGTGGTCTTAACCTTCAGTCTGCTGACACAGTTGTCATTTATGATCCTGATCCA AATCCAAAAAATGAGGAGCAGGCTGTTGCGAGAGCTCATCGCATTGGACAGAAACGAGAAGTCAAAGTTATCTACATGGAAGCAGTTGTTGATAAAATCT CTAGCCATCAGAAGGAGGATGAGATGAGAAGTGGAGGCAGTGTTGATATGGAGGATGAACTTGCAGGCAAGGATCGCTACATAGGATCCATTGAAAGCCT CATAAGGAACAATATTCAACAATATAAGATTGATATGGCTGATGAGGTTATCAATGCTGGGCGCTTTGATCAAAGAACAACACACGAAGAGAGACGTTTG ACTTTGGAGACATTATTACATGATGAAGAGAGGTATCAAGAAAATGTCCATGATGTTCCCTCACTGCAGGAGGTAAATCGTATGATTGCTAGAAGTGAAG AGGAAGTTGAATTGTTTGATCAAATGGATGAAGAACTGGACTGGATTGAAGAGATGACACGGTTTGATCAGGTGCCTAAGTGGCTTCGAGCAAATACAAG AGAGGTGAATGCTGCTATTGCTGCTTCATCAAAAAGACCATCAAAGAACATTTTATCAGGTAGTACTGTTGGCGTTGAATCCAGTGAAGTTGGTACTGAA AGGAGAAGGGGGCGGCCCAAGGGTAAAAAACATCTTAGTTATAAGGAGGTAGAGGATGATAACGGAGAATATTCTGAAGCAAGCTCCGATGAAAGAAATG TATATGCACATGAAGAGGGTGAAGTAGGAGAATTTGAAGATGAGGGGTATAGTGGGGCTGAAGGAGCTCAGCCCACTGTTAAAGACCAATTAGTAGATGA TCCTGTATGTAATGCTGGATATGAATTTCCTCGATCATCAGAAAGTGCTAAAAAGAATCAGATGATTGAAGAAGCTGGCTCCTCAGGATCATCCTCAGAC AGTCAAAGATTGAGACAAGCAGTATCACCTTCCGTGTCGTCTCAGAAATTTGGTTCTCTATCTGCATTAGATGCCAGGCCAGGTTCCACTTCGAAAAGAA TGGCAGATGAGTTAGAGGAAGGGGAAATTGCTGTATCAGGTGATTCTCACATGGACCATCAGCAGTCTGAAAGTTGGATTCATGATCGCGATGAAGGTGA GGATGAACAGGTTTTGCAGATGCCCAAGATTAAACGTAAGCGTAGTCTTCGTATTCGACCCCGCCACACTGCTGAAAGGCCTGAAGGAAAATCTACCAAT GAGATGACATCTCATTTAGCAGTCCAAGCAGACCATAAATATCATGCACAACTCAGGACTGACCCTGAATCAACAGCTTTTGTTGATTCCAATCCCAGCA AGCATGACCAAAACCCATCATCGGTGAAAAATAAGCGAACTTTACCTTCAAGGAGAGTAGCTAACACATCCAAACTACATGGCTCCCCAAAGTCTAGTCG TTTAAATTCTATTTCTGCTCATTCAGAGGATGGTGGTGAACATTCCAGAGATATCTGGGAAGGGAAGCCTATCAATTCAAGTGGATCTTCAGCTCATGGC AGTAAGACGGCTGAAGTCATCCAGAGAAAGTGCAAAAATGTAATTGGCAAGCTCCAAAGGAGAATAGACAAGGAAGGTCATCAAATTGTACCTTTGTTAA CAGATTTGTGGAAGAGGGTTGAGAATTCTGGGTACAGTGGTGGATCCGGGAACAGTCTGTTGGATTTAAGAAAGATTGACCAGCGGATTGATAGATTGGA GTATAGTGGAGCAATGGAGCTTGTATTTGATGTGCAGTTCATGTTAAAGAGTGCAATGCATTTTTACAGTTTTTCACATGAGGTAAGATCTGAAGCAAGG AAGGTCCATGACCTATTTTTTGATATCTTGAAAATTGCATTTCCGGATACCGACTTCCAAGATGCAAGAATTGCACTTTCTTTCTCTGCTCAAGTACCTG CGGGTACCGTTACTTCTCCTAGGCCAGTGGCTGTTGGCCAAAGCAAGAGGCACAGGATGGTAAACGAGGTTGAAACTGATCCTCCATACCCTCCAAAGAA GTCACTTCCGCGTGGATCGGCTTCCAGTGGCGAAAACTCCAGGATCAAAGGCCATCATCATCTGCCACAGAAAGAATCAAGAGCTGGAAGCAGCTCTCGG GAGCAACCTCAGCAGGATGATTCTCCACTGCTAACTCATCCAGGTGAACTGGTTGTATGCAAGAAGAGAAGAAATGACAGGGATAAATCTTTGGTGAAGC CGAGGACTGGCCCTATTTCACCATCTCGCATAGGTCTCGCCATAAGAAGTCCAGGGTCCGGTTCAGTCCCTAAGGATGCTAGACTAGCTCAGCATAATCC CCATGCACCAGGATGGGCCGGTCAATCATCTCAGCCAGGAAATGGGTCTGGTGGTGGCTCAGTTGGATGGGCTAACCCTGTAAAGAGGCTAAGGTCAGAT CCTGGGAAGAGGAGACCAAGTCATATGTAGATTTGTTGAGTATTTGATATAATATACATATTGCTGCTCTACTAGTTTCAGAAAGAGTTTTAGTGGCCTT TTACCTTCATATAGTCTATACCATAATACTGTTAAATATAGAATTAGGCCCTAAGTTGTATTTTTACAGCTACCTTAACTGGTTAAATGCAAGTCATTCT CCTATTTTCCTTTTTGTTTGGGTATATATATATATATGTACCTTTTCTTTACATAACTCAAACTCTATATAGCAACTTATTGGTTCATGTTGGTCTTTCT AGAATTGATCCCTATGAGGTCTTGTTTTCATTGGTGCTAGTTCTTTCTTCCAAATTCTTGTGTGAATGATAAGAA
• Tissue: pods
• Gene name: LI_gene_194465;
• Additional information: details;

Expression of Ll_transcript_465249

FPKM

• PAB: 2
• PNAB: 2.2
• PS1: 10.2
• PS2: 8.2
• PS3: 15.8
• PW1: 7.1
• PW2: 7.4
• PW3: 7.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465249

• Blastp: ATP-dependent helicase BRM from Arabidopsis with 63.56% of identity
• Blastx: ATP-dependent helicase BRM from Arabidopsis with 63.51% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT2G46020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434058.1)
• Pfam: QLQ (PF08880.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;