Ll_transcript_465251

Id TrinityTRINITY_DN52655_c0_g2_i2
Name TranscriptLl_transcript_465251
SequenceGAGAAATAGGTCCATTCACATTTTTCACTTTCAATACTCTGAACCCCAAAACCAAAAAAAGAGTCTTTTTTTTTTCAAAAAAAGTGCGTAGGGTTTGACC CAAAATTGCACACAATCATGATTCGGACAAGTTTCATCTTCTTCTGAAATATCCACCCTTCATTTGTTCCCGAAAATCACGTTTTTTTAGAGAGAGAAAA TCGGTGTCCGCTTCAGCTATGAACAGAGAGAAAAAAGTGAAAGCATGATGATGCCTTTTTAATTCAAAAAAAGTTTGGGTTTTTCTTGAATTTTGGAGGG ATCTGAGGTTTTTGCATTTGTGGGTTCTGTTCAATTTTTTATGAATTTTGCTTCTTTAATTTTCTGTGTGTAATTTGCACTGTTGAAGAGTGATCTGAAT TTTGGTTATTCTCATTCAGTTCTACATGCAATCTGGTGGCAGTGGTGGTGGTGGTGGCCGAAACCCTGGCGTGGGGTCGGCGGGCCGAGCAGCATCGTCT CCGGCAGCTGCTTCGCCGTCTTCATCGTCTCCGGCATCACAATTAGGGTTAGACTCATTGCATCAGCAGCAGCTAGGTTCTAGACAGTCATTCCAACAGC AACTACACAGAAAACCTGAAGGGAATGAATCCTTTTTAGCTTATCAAGCGGGAGTTCAAGGGGCATATGGGAGTAACAGTTTCCCATCTTCTAGTGGCAT GCATCTGCCTCAGCAACCTCGTAAATTCATTGATTCAGCTCAACATGGTTCCAACCAGGATGCCCAGCTAAGAGGTCAAGGTGTTGAGCAGCAAATGCGA AATCCTGTTAATCATGCATATCTTCAATATGCTCTCCAGGCACAACAAAAGTCTGCGACGGGAATTCAGTCACAGCAGCATTCTATGATGGCAATGGTAA ACCCGTCACTTCTGAAGGGTCAGGAAATGGGTTCGGGTAATTTGAAAATGCAGGACCTTATGTCTATGCAGGCAATGAATCAAGCGCAAGGATCATCATC CTCTAGGAATTCATCTGAACATGTTGGCCGTGGAGAAAAGCAGATAGAGCAAGGACAGCATATAGCACATGATCAAAAGAGTGATGGAAAACCTTCAAAC CAGGGACCAGCCATCGGTTACTTAATGCCTGAAAATATGATAAAATCAATGCAAGCACCAGAAACTCAGCAAGGCATCCAAAATGCTATGAACACCCAGA TTGCAATGTCTGCTCAATTGCAGGCTGTACAGGCATGGGCTCGAGAACGTAATATTGATTTGTCACATCCTGCAAATGCTAGCTTAATGGCACAACTAAT TCCACTGATGCAGTCAAGGATGGTCCCTCAACCAAAGGCCAACGAGAGCAACGTTGGTGCTCAGTCATCTCCTGCCCCTGTTTCAAAGCAGCAGGTTAAT TCTCCAGCAGTTGCAAGTGAGAGCTCAGCGCATGCCAATTCATCAAGTGATGTGTCCGGGCAGTCAGGTTCTTCAAAAGCAAGGCAGACAGTTCCACCCA GCCATTTTGGCTCAACAACAAATCCTGGTATACCCAGCAACTCCAGCGACATGGTAGTGCAGCAATTCAGTGTTCATGGCAGAGAGTCTCAAACTTCTTT GAAGCAACCAGTAGTATTTGGGAACGGAATTCCCTCTATGCATACTCAGCAGTCTTCTTCCAATGTGAACTTGAATGCAGATAATCCGTTGAATGCAAAA ACTTCATCATCTGGTCCAGAACTTCCACAAATGCAGCACAGCAGGCAGTTAAACCAATCTGCTCCTCAGGCTGGAGGCCAACCTAATGAAGGGGGTTCAG GAAAATTTGCTAGATCTCAAGGGTCACCGGCTCAGATGGCTCAACAACGAAGCGGGTTTACCAAAAAACAGCTTCATGTTCTAAAAGCACAGATACTAGC ATTTAGGCGGCTGAAGAAAGGAGAAGGTACTCTACCCCAAGAACTTCTTCGGGCTATTGCTCCACCTCCTCTTGAGATGCAGATGCGACCCCCAAATCAT CCTTCTGGAGGACAAATTCAAGACAAATCTACTGGAAGTATCATGGCTGAACAACCAAGGCACGTTGAGTCCAATACGAAGGATTCACAATCTTTCCGTG CTGTTAATGGACAGAGTTCTTTAAAGCAGGAATCATTTGGCAGAGATGAGAAATCCACTATGTCATCAGTTCATATGCAAGCTGTTGTGCAATCTGCGTC AAAGGAATCTGCGCCAATGTTATCTGCTGGAAAGGAACAGCAGAAGTCAATGGCAAGCTCTGCTAAGTTAGACCAGGACAGTGAACATGGAAATAACAGA ACTCCTGTTAGGAACGAGTTAGCATTAGATAGGGGAAAGGCTGTTGCACCACAGCCTTCTGTTTCTGACTCAATTCAAACGAAGAAACCTGCACAAGCAA GCACTGTCTCTCAGCCAAAGGATGTAGGATCCACTGGAAAATATCATGGACCCCTATTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCTTTGGGTC CTCGATGATGGTAAACAATAACAATAATATGTCATTGGCATATGATGTCAAAGAGATTCTTTTTGAGGAAGGCATGGAAGTACTTACCAAGAAACGGACA GAAAATCTAAAGAAGATCGAAGGTTTATTAGCAATAAACTTAGAGAGGAAAAGAATTAGACCTGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGC TTCACCTTTTAGATTTTCAAGCACGTTTAAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAG GTTGTGTGATCGTCAGCGTATGGAGCTTGCTAGACAAGTGCAGTCATCTCAGAGAGCTTTGAGGGAGAAGCAACTCAAATCTATTTTTCAGTGGCGTAAG AAGCTTCTTGAGGCACATTGGGCTATTCGTGATGCCCGTACTGCTCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGAGGGAGTTCTCAAAAC GTAAAGATGATGACAGGGACAAAAGGATGGAAGCGTTGAAAAACAATGATGTTGACCGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATGCCTGG TGATGCTGCAGAGAGATATGCTGTTCTTTCATCTTTCTTAAGCCAAACAGAAGAGTATCTACATAAATTAGGAAGTAAGATAACAGCTGCCAAAAATCAA CAGGAAGTGGAAGAGGCAGCAAAAGCTGCTGCAGCTGCAGCACGGTTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAACTTGTGCCGGAGAGG AAATGATGATCAGAAATCATTTTATGGAAATTAATACTCCTAGAGACAGTTCATCTGTTAACAAGTACTACACTCTTGCTCATGCTGTGAATGAAACGGT CATAAGGCAACCATCAATGTTACGAGCTGGAACATTGAGAGACTATCAGCTTGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAACAAGTTGAATGGA ATTTTGGCGGATGAGATGGGTCTTGGCAAAACTGTGCAGGTTATGGCATTGATTGCCTACTTGATGGAATTTAAGGGAAACTATGGGCCACATCTTATAA TAGTCCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGCTTTATAATTGGTTACCATCTGTGTCATGCATCTATTATGTTGGAACAAAGGATCATAGGTC AAGATTATTTTCTCAAGAGGTTTCTGCTATGAAATTTAATGTCCTTGTGACGACTTATGAGTTCATCATGTATGACCGATCAAAGCTTTCAAAAATTGAT TGGAAGTATATCATAATTGATGAAGCACAGAGAATGAAGGATAGAGATTCGGTTCTTGCCCGTGATCTTGATAGATATCGTTGTCAAAGACGCCTTCTTT TGACAGGAACACCATTACAGAATGATTTGAAGGAACTCTGGTCCCTTTTAAATTTGCTTCTTCCTGAGGTGTTTGACAATAAGAAAGCCTTTAATGACTG GTTCTCGAAACCATTTCAAAAGGAAGCTCCTACTCCAAATGCAGAGGATGATTGGCTTGAGACGGAGAAGAAAGTTATTGTTATCCATAGACTTCATCAG ATTCTTGAGCCTTTCATGCTCAGACGTCGTGTCGAAGATGTTGAAGGTTCTCTTCCACCAAAGGTCTCGATAGTTTTAAAATGTAAAATGTCCGCGGCCC AGAGTGCCATTTATGACTGGATTAAATCAACAGGAACCCTTCGTCTTGATCCTGAGGATGAGATGTGTAAGGTTCAAAAGAATCCAGTTTACCAGATGAA GCAATATAAAACTTTAAATAACAGATGCATGGAGCTTCGTAAAACATGCAACCACCCACTGCTTAACTATCCATTCTTCAGTGACTTATCTAAAGAGTTC ATTGTAAAATCTTGTGGAAAATTGTGGATCCTGGATAGGATCCTTGTAAAACTTGAAAGAACTGGTCATCGGGTGCTACTGTTTAGTACCATGACAAAAC TCCTTGACATTTTGGAAGAATACCTGCAGTGGCGAAGACTTGTGTTCAGAAGAATAGATGGGACAACTAGTTTAGAAGACCGTGAATCAGCTATAATGGA CTTTAATAGCCCTGATTCAGACTGTTTTATTTTCTTGCTTAGCATCCGAGCTGCTGGGCGTGGTCTTAACCTTCAGTCTGCTGACACAGTTGTCATTTAT GATCCTGATCCAAATCCAAAAAATGAGGAGCAGGCTGTTGCGAGAGCTCATCGCATTGGACAGAAACGAGAAGTCAAAGTTATCTACATGGAAGCAGTTG TTGATAAAATCTCTAGCCATCAGAAGGAGGATGAGATGAGAAGTGGAGGCAGTGTTGATATGGAGGATGAACTTGCAGGCAAGGATCGCTACATAGGATC CATTGAAAGCCTCATAAGGAACAATATTCAACAATATAAGATTGATATGGCTGATGAGGTTATCAATGCTGGGCGCTTTGATCAAAGAACAACACACGAA GAGAGACGTTTGACTTTGGAGACATTATTACATGATGAAGAGAGGTATCAAGAAAATGTCCATGATGTTCCCTCACTGCAGGAGGTAAATCGTATGATTG CTAGAAGTGAAGAGGAAGTTGAATTGTTTGATCAAATGGATGAAGAACTGGACTGGATTGAAGAGATGACACGGTTTGATCAGGTGCCTAAGTGGCTTCG AGCAAATACAAGAGAGGTGAATGCTGCTATTGCTGCTTCATCAAAAAGACCATCAAAGAACATTTTATCAGGTAGTACTGTTGGCGTTGAATCCAGTGAA GTTGGTACTGAAAGGAGAAGGGGGCGGCCCAAGGGTAAAAAACATCTTAGTTATAAGGAGGTAGAGGATGATAACGGAGAATATTCTGAAGCAAGCTCCG ATGAAAGAAATGTATATGCACATGAAGAGGGTGAAGTAGGAGAATTTGAAGATGAGGGGTATAGTGGGGCTGAAGGAGCTCAGCCCACTGTTAAAGACCA ATTAGTAGATGATCCTGTATGTAATGCTGGATATGAATTTCCTCGATCATCAGAAAGTGCTAAAAAGAATCAGATGATTGAAGAAGCTGGCTCCTCAGGA TCATCCTCAGACAGTCAAAGATTGAGACAAGCAGTATCACCTTCCGTGTCGTCTCAGAAATTTGGTTCTCTATCTGCATTAGATGCCAGGCCAGGTTCCA CTTCGAAAAGAATGGCAGATGAGTTAGAGGAAGGGGAAATTGCTGTATCAGGTGATTCTCACATGGACCATCAGCAGTCTGAAAGTTGGATTCATGATCG CGATGAAGGTGAGGATGAACAGGTTTTGCAGATGCCCAAGATTAAACGTAAGCGTAGTCTTCGTATTCGACCCCGCCACACTGCTGAAAGGCCTGAAGGA AAATCTACCAATGAGATGACATCTCATTTAGCAGTCCAAGCAGACCATAAATATCATGCACAACTCAGGACTGACCCTGAATCAACAGCTTTTGTTGATT CCAATCCCAGCAAGCATGACCAAAACCCATCATCGGTGAAAAATAAGCGAACTTTACCTTCAAGGAGAGTAGCTAACACATCCAAACTACATGGCTCCCC AAAGTCTAGTCGTTTAAATTCTATTTCTGCTCATTCAGAGGATGGTGGTGAACATTCCAGAGATATCTGGGAAGGGAAGCCTATCAATTCAAGTGGATCT TCAGCTCATGGCAGTAAGACGGCTGAAGTCATCCAGAGAAAGTGCAAAAATGTAATTGGCAAGCTCCAAAGGAGAATAGACAAGGAAGGTCATCAAATTG TACCTTTGTTAACAGATTTGTGGAAGAGGGTTGAGAATTCTGGGTACAGTGGTGGATCCGGGAACAGTCTGTTGGATTTAAGAAAGATTGACCAGCGGAT TGATAGATTGGAGTATAGTGGAGCAATGGAGCTTGTATTTGATGTGCAGTTCATGTTAAAGAGTGCAATGCATTTTTACAGTTTTTCACATGAGGTAAGA TCTGAAGCAAGGAAGGTCCATGACCTATTTTTTGATATCTTGAAAATTGCATTTCCGGATACCGACTTCCAAGATGCAAGAATTGCACTTTCTTTCTCTG CTCAAGTACCTGCGGGTACCGTTACTTCTCCTAGGCCAGTGGCTGTTGGCCAAAGCAAGAGGCACAGGATGGTAAACGAGGTTGAAACTGATCCTCCATA CCCTCCAAAGAAGTCACTTCCGCGTGGATCGGCTTCCAGTGGCGAAAACTCCAGGATCAAAGGCCATCATCATCTGCCACAGAAAGAATCAAGAGCTGGA AGCAGCTCTCGGGAGCAACCTCAGCAGGATGATTCTCCACTGCTAACTCATCCAGGTGAACTGGTTGTATGCAAGAAGAGAAGAAATGACAGGGATAAAT CTTTGGTGAAGCCGAGGACTGGCCCTATTTCACCATCTCGCATAGGTCTCGCCATAAGAAGTCCAGGGTCCGGTTCAGTCCCTAAGGATGCTAGACTAGC TCAGCATAATCCCCATGCACCAGGATGGGCCGGTCAATCATCTCAGCCAGGAAATGGGTCTGGTGGTGGCTCAGTTGGATGGGCTAACCCTGTAAAGAGG CTAAGGTCAGATCCTGGGAAGAGGAGACCAAGTCATATGTAGATTTGTTGAGTATTTGATATAATATACATATTGCTGCTCTACTAGTTTCAGAAAGAGT TTTAGTGGCCTTTTACCTTCATATAGTCTATACCATAATACTGTTAAATATAGAATTAGGCCCTAAGTTGTATTTTTACAGCTACCTTAACTGGTTAAAT GCAAGTCATTCTCCTATTTTCCTTTTTGTTTGGGTATATATATATATATGTACCTTTTCTTTACATAACTCAAACTCTATATAGCAACTTATTGGTTCAT GTTGGTCTTTCTAGAATTGATCCCTATGAGGTCTTGTTTTCATTGGTGCTAGTTCTTTCTTCCAAATTCTTGTGTGAATGATAAGAA BLAST
Tissuepods
Gene nameLI_gene_194465; 
Additional informationdetails; 

Expression of Ll_transcript_465251

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_465251
BlastpATP-dependent helicase BRM from Arabidopsis with 63.56% of identity
BlastxATP-dependent helicase BRM from Arabidopsis with 63.51% of identity
Eggnoghelicase(COG0553)
KeggLink to kegg annotations (AT2G46020)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019434058.1)
PfamQLQ (PF08880.10)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;