Ll_transcript_465253

• Id Trinity: TRINITY_DN52655_c0_g2_i3
• Name Transcript: Ll_transcript_465253
• Sequence: GAGAAATAGGTCCATTCACATTTTTCACTTTCAATACTCTGAACCCCAAAACCAAAAAAAGAGTCTTTTTTTTTTCAAAAAAAGTGCGTAGGGTTTGACC CAAAATTGCACACAATCATGATTCGGACAAGTTTCATCTTCTTCTGAAATATCCACCCTTCATTTGTTCCCGAAAATCACGTTTTTTTAGAGAGAGAAAA TCGGTGTCCGCTTCAGCTATGAACAGAGAGAAAAAAGTGAAAGCATGATGATGCCTTTTTAATTCAAAAAAAGTTTGGGTTTTTCTTGAATTTTGGAGGG ATCTGAGGTTTTTGCATTTTTCTACATGCAATCTGGTGGCAGTGGTGGTGGTGGTGGCCGAAACCCTGGCGTGGGGTCGGCGGGCCGAGCAGCATCGTCT CCGGCAGCTGCTTCGCCGTCTTCATCGTCTCCGGCATCACAATTAGGGTTAGACTCATTGCATCAGCAGCAGCTAGGTTCTAGACAGTCATTCCAACAGC AACTACACAGAAAACCTGAAGGGAATGAATCCTTTTTAGCTTATCAAGCGGGAGTTCAAGGGGCATATGGGAGTAACAGTTTCCCATCTTCTAGTGGCAT GCATCTGCCTCAGCAACCTCGTAAATTCATTGATTCAGCTCAACATGGTTCCAACCAGGATGCCCAGCTAAGAGGTCAAGGTGTTGAGCAGCAAATGCGA AATCCTGTTAATCATGCATATCTTCAATATGCTCTCCAGGCACAACAAAAGTCTGCGACGGGAATTCAGTCACAGCAGCATTCTATGATGGCAATGGTAA ACCCGTCACTTCTGAAGGGTCAGGAAATGGGTTCGGGTAATTTGAAAATGCAGGACCTTATGTCTATGCAGGCAATGAATCAAGCGCAAGGATCATCATC CTCTAGGAATTCATCTGAACATGTTGGCCGTGGAGAAAAGCAGATAGAGCAAGGACAGCATATAGCACATGATCAAAAGAGTGATGGAAAACCTTCAAAC CAGGGACCAGCCATCGGTTACTTAATGCCTGAAAATATGATAAAATCAATGCAAGCACCAGAAACTCAGCAAGGCATCCAAAATGCTATGAACACCCAGA TTGCAATGTCTGCTCAATTGCAGGCTGTACAGGCATGGGCTCGAGAACGTAATATTGATTTGTCACATCCTGCAAATGCTAGCTTAATGGCACAACTAAT TCCACTGATGCAGTCAAGGATGGTCCCTCAACCAAAGGCCAACGAGAGCAACGTTGGTGCTCAGTCATCTCCTGCCCCTGTTTCAAAGCAGCAGGTTAAT TCTCCAGCAGTTGCAAGTGAGAGCTCAGCGCATGCCAATTCATCAAGTGATGTGTCCGGGCAGTCAGGTTCTTCAAAAGCAAGGCAGACAGTTCCACCCA GCCATTTTGGCTCAACAACAAATCCTGGTATACCCAGCAACTCCAGCGACATGGTAGTGCAGCAATTCAGTGTTCATGGCAGAGAGTCTCAAACTTCTTT GAAGCAACCAGTAGTATTTGGGAACGGAATTCCCTCTATGCATACTCAGCAGTCTTCTTCCAATGTGAACTTGAATGCAGATAATCCGTTGAATGCAAAA ACTTCATCATCTGGTCCAGAACTTCCACAAATGCAGCACAGCAGGCAGTTAAACCAATCTGCTCCTCAGGCTGGAGGCCAACCTAATGAAGGGGGTTCAG GAAAATTTGCTAGATCTCAAGGGTCACCGGCTCAGATGGCTCAACAACGAAGCGGGTTTACCAAAAAACAGCTTCATGTTCTAAAAGCACAGATACTAGC ATTTAGGCGGCTGAAGAAAGGAGAAGGTACTCTACCCCAAGAACTTCTTCGGGCTATTGCTCCACCTCCTCTTGAGATGCAGATGCGACCCCCAAATCAT CCTTCTGGAGGACAAATTCAAGACAAATCTACTGGAAGTATCATGGCTGAACAACCAAGGCACGTTGAGTCCAATACGAAGGATTCACAATCTTTCCGTG CTGTTAATGGACAGAGTTCTTTAAAGCAGGAATCATTTGGCAGAGATGAGAAATCCACTATGTCATCAGTTCATATGCAAGCTGTTGTGCAATCTGCGTC AAAGGAATCTGCGCCAATGTTATCTGCTGGAAAGGAACAGCAGAAGTCAATGGCAAGCTCTGCTAAGTTAGACCAGGACAGTGAACATGGAAATAACAGA ACTCCTGTTAGGAACGAGTTAGCATTAGATAGGGGAAAGGCTGTTGCACCACAGCCTTCTGTTTCTGACTCAATTCAAACGAAGAAACCTGCACAAGCAA GCACTGTCTCTCAGCCAAAGGATGTAGGATCCACTGGAAAATATCATGGACCCCTATTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCTTTGGGTC CTCGATGATGGTAAACAATAACAATAATATGTCATTGGCATATGATGTCAAAGAGATTCTTTTTGAGGAAGGCATGGAAGTACTTACCAAGAAACGGACA GAAAATCTAAAGAAGATCGAAGGTTTATTAGCAATAAACTTAGAGAGGAAAAGAATTAGACCTGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGC TTCACCTTTTAGATTTTCAAGCACGTTTAAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAG GTTGTGTGATCGTCAGCGTATGGAGCTTGCTAGACAAGTGCAGTCATCTCAGAGAGCTTTGAGGGAGAAGCAACTCAAATCTATTTTTCAGTGGCGTAAG AAGCTTCTTGAGGCACATTGGGCTATTCGTGATGCCCGTACTGCTCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGAGGGAGTTCTCAAAAC GTAAAGATGATGACAGGGACAAAAGGATGGAAGCGTTGAAAAACAATGATGTTGACCGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATGCCTGG TGATGCTGCAGAGAGATATGCTGTTCTTTCATCTTTCTTAAGCCAAACAGAAGAGTATCTACATAAATTAGGAAGTAAGATAACAGCTGCCAAAAATCAA CAGGAAGTGGAAGAGGCAGCAAAAGCTGCTGCAGCTGCAGCACGGTTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAACTTGTGCCGGAGAGG AAATGATGATCAGAAATCATTTTATGGAAATTAATACTCCTAGAGACAGTTCATCTGTTAACAAGTCAGTTTTGTTAGTTAACTTTTTGTGCACTGTCTT GATTTCTGGCATAAAAAAGCTGAGAGGATATGTTTTTCAGTGAAAGTTGTTGGCTCAATGTCTTTATGCTTTTTTTAACTCTAAATTAAATGCCCTGTTC TTGTTTATATAACTAATTAACTATGTTTGCAGAACTTTTTATAATTGGTTCTTTATGATAGTATGTATCTGATGCTTGATGGTACCCTTATTGGATGCTT TCCAGATACTACAGTCTTGCTCATGCTGTGAATGAAACGGTTATTAGGCAACCATCAATGTTACGAGCTGGAACATTGAGAGACTATCAGCTTGTTGGTT TGCAATGGATGCTTTCTTTGTATAACAATAAGTTAAATGGAATTTTGGCGGATGAGATGGGTCTTGGCAAAACTGTGCAGGTTATGGCATTGATTGCCTA CTTGATGGAGTTTAAGGGAAACTATGGCCCACATCTTATAATAGTCCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGCTTTATAATTGGTTACCATCT GTGTCATGCATCTTTTATGTTGGAATGAAGGATCAAAGGTCAAAATTATTCTCTCAAGAGGTTTCTGCTATGAAATTTAATGTCCTTGTGACAACTTATG AGTTCATCATGTATGATCGGTCAAAGCTTTCAAAAATTGATTGGAAGTATATCATAATTGATGAAGCACAGAGAATGAAGGATAGAGATTCGGTTCTTGC CCGTGATCTTGACAAATATCGTTGTCAAAGACGCCTGCTTTTGACTGGAACACCATTGCAGAATGATTTGAAGGAACTCTGGTCCCTTTTAAACTTGCTT CTTCCTGAGGTTTTTGACAATAAGAAAGCCTTTAACGACTGGTTCTCAAAACCATTTCAAAAGGAATGTCCTACTCAAAATGCAGAGGATGATTGGCTTG AGACGGAGAAGAAAGTTATTGTTATCCATAGACTTCATCAGATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTCGAAGATGTTGAAGGCTCGCTTCCCCC AAAGGTCTCCATAGTTTTAAAATGTAAAATGTCTGCGGTCCAGAGTGCCATTTATGACTGGATTAAATCAACAGGCACTCTTCGTCTTGATCCCGAGGAT GAGATGTGTAGGGTTCAAAAGAATCCAGCCTACCAGATGAAGCAATATAAAACTTTAAATAACAGATGTATGGAGCTTCGTAAAACTTGTAATCATCCAT TGCTTAACTACCCATTCTTCAGTGACTTATCTAAAGAGTTCATTGTAAAGTCTTGTGGAAAATTGTGGATCCTGGATAGGATCCTCGTAAAACTTCAAAG AACTGGTCATCGAGTGCTACTGTTCAGTACCATGACAAAACTCCTTGACATTTTGGAAGAATACCTGCAGTGGCGAAGACTTGTGTTCAGAAGAATTGAT GGCACAACTAGTTTGGAAGACCGTGAATCAGCTATAGTGGACTTCAATAGCCCTGATACAGACTGCTTTATTTTTTTGCTCAGTATCCGAGCTGCTGGGC GTGGTCTTAACCTTCAGTCTGCTGACACAGTTGTCATTTATGATCCTGATCCAAACCCTAAAAATGAGGAGCAGGCCGTTGCCAGAGCTCATCGCATTGG ACAGAAACGAGAAGTCAAAGTTATCTACATGGAAGCAGTTGTTGATAAAATCTCTAGCCATCAGAAGGAGGATGAGCTGAGAAATGGAGGCAGTGTTGAT ATGGACGATGAACTTGCAGGCAAGGATCGTTACATTGGATCCATTGAGAGCCTCATAAGGAACAACATTCAACAATATAAGATTGATATGGCTGATGAGG TTATCAATGCTGGACGCTTTGATCAAAGAACAACACATGAAGAGAGACGTTTGACTTTGGAGACATTATTACATGATGAAGAGAGGTATCAAGAAAATGT CCATGATGTTCCCTCACTGCAGGAAGTAAATCGCATGATTGCTCGAAGTGAAGAGGAAGTTGAACTGTTTGATCAAATGGATGAGGAACTGGATTGGATT GAGGAGATGACACGGTTTGATCAGGTGCCGAAGTGGCTTCGAGCAGATACAAGAGAAGTGAATGCTGCTATTGCTGCTTCATCAAAAAGACCATCAAAGA ATATTTTATCTGGTAGTACTGTGGGCGTCGAAACCAATGAAGTTGGTTCTGAAAGGAGAAGGGGACGACCCAAGGCTAAAAAACATCCTAGTTATAAGGA GGTCGAGGATGATAATGGAGAATATTCTGAAGCAAGCTCTGAGGAAAGAAACGGATATGCACATGAAGAGGGTGAAGTAGCAGAATTTGAAGACGATGGG CATAGTGGGGCTGATGGAGCTCAGCCCATTTATAAAGGTCAACTGGGAGATGATCTGCTATGCGATGCTGGATATGAATTTCCTCGATCTTCAGAAAGTG CTAAAAATAATCATATGGTTGAAGAAGCTGGCACCTCAGGATCATCCTCGGACAGTCAAAGATTGGCACAGATATTATCACCATCTGTTTCCTCTCAGAA ATTTGGTTCCCTATCTGCGTTAGATGCTAGGCCAAGTTCTGCTTCGAAAAGGATGTCACGTGAGTTAGAGGAAGGGGAAATTGCTGTATCGGGCGATTCT CAGATGGACCATCAGCAGTCTGGAAGTTGGATTCATGATCGTGATGAAGGTGAGGATGAACAAGTTTTGCAGAAACCGAAGATTAAACGTAAACGTAGTC TTCGTGTTCGACCCCGCTATGCTACTGAAAGGTCTGAAGAAAAGTCTACCAATGAGATGGCATCTCATTTAGCAGTCCAAGCACACCATAAATATCAAGT GCAACTCAGGACTGACCTAGAATCAAAATCTGTGGTAGATTCCAATCCCAGCAAGCATGACCAGAACCCATCATCAGTAAAAAATAAGCGAACTTTCCCT TTAAGGAGAGTAGCTAACTCATCCAAATTACATACCTCCTCAAAGTCTAGTCGTTTGAATACTATTTCTGCACATTCAGAGGATGGTGGTGAACATTCCA GAGAAAGATTGGAGGGGAAGCCTATCAATTCAAGTGGATCTTCAGCTCATGGCAGTAAGACGGCTGAAGTCATCCAGAGAAAGTGCAAAAATGTAATTGG CAAGCTCCAAAGGAGAATAGACAAGGAAGGTCATCAAATTGTACCTTTGTTAACAGATTTGTGGAAGAGGGTTGAGAATTCTGGGTACAGTGGTGGATCC GGGAACAGTCTGTTGGATTTAAGAAAGATTGACCAGCGGATTGATAGATTGGAGTATAGTGGAGCAACAGAGCTTGTATTTGATGTGCAGTTCATGTTAA AGAGTGCAATGCATTTTTATGGTTTTTCACATGAGATAAGATCTGAAGCAAGGAAGGTTCATGATCTATTTTTCGATATCTTGAAAATCGCATTTCCTGA TACCGACTTCCAAGATGCAAGAATTGCACTTTCTTTCTCTGCTCAAGTTCCTGCTGGTACTGTAACATCCCCTAGGCCGGTGGCTGTTGGCCAAAGCAAG AGACACAGGATGACAAACGAGGCCGAAACTGATCCTCCATACCCGCCACATAAGTCAATGCCTCGCGGATCAGCTTCCAGCAGCGAAAACACCAGGATCA AAGTCCATGCCGCACAGAAAGAATCAAGACCCGGAAGCAGCGCCAGGGAGCAACACCAGCAGGATGATTCTCCAAAGCTCACTCATCCAGGTGAACTGGT TAAATGCAAGAAGAGAAGAAATGATAGGGATAAATCAATTGTGAAGCCTAGGACTGGTCCTGTTTCACCATCTCTCATTGGTCCTACTATAAGAAGTCCA GGGTCAAATTCAGCCCCTAAGGATGCTAGACTTTCTCAGCAGAATCTACATTCACAAGGATGGGGTGGTCACTTATCTCAACAAGCAAATGGGTCTGGTG GTGGCTCAGTTGGATGGGCTAACCCTGTAAAGAGGCTAAGGACAGATACTGGGAAAAGGAGACCAAGTCATATGTAGATTTGTCAATGATGTTATATAAT GTTGGATATATTTCTCTGCTAGTTTCAACAAGAGTTTTAGTGACCCTTACTCTTCATAGTTTCCATAATACAGTTAAATATAGATTTAGGCCCTGAATTG TATTTTATATCTACCTAAACCGGTTTAAAATGCAAGTCCTTTCTCCAATTCTCTTCTTTGTTTGGTATCTGTCTAACATTTCCAACTTCACCTCTCTAAA ATATAAGGGTGGTAAGGTGTGTGTATATATATATATCTATATTTATATTTATTTTAGTTCTTTAAAAGAATGTAG
• Tissue: pods
• Gene name: LI_gene_194465;
• Additional information: details;

Expression of Ll_transcript_465253

FPKM

• PAB: 0.1
• PNAB: 2.3
• PS1: 3.5
• PS2: 2.3
• PS3: 1.7
• PW1: 1.8
• PW2: 1.2
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465253

• Blastp: ATP-dependent helicase BRM from Arabidopsis with 69.89% of identity
• Blastx: ATP-dependent helicase BRM from Arabidopsis with 69.81% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT2G46020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432985.1)
• Pfam: Type III restriction enzyme, res subunit (PF04851.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;