Ll_transcript_465257

• Id Trinity: TRINITY_DN52655_c0_g2_i4
• Name Transcript: Ll_transcript_465257
• Sequence: GAGAAATAGGTCCATTCACATTTTTCACTTTCAATACTCTGAACCCCAAAACCAAAAAAAGAGTCTTTTTTTTTTCAAAAAAAGTGCGTAGGGTTTGACC CAAAATTGCACACAATCATGATTCGGACAAGTTTCATCTTCTTCTGAAATATCCACCCTTCATTTGTTCCCGAAAATCACGTTTTTTTAGAGAGAGAAAA TCGGTGTCCGCTTCAGCTATGAACAGAGAGAAAAAAGTGAAAGCATGATGATGCCTTTTTAATTCAAAAAAAGTTTGGGTTTTTCTTGAATTTTGGAGGG ATCTGAGGTTTTTGCATTTTTCTACATGCAATCTGGTGGCAGTGGTGGTGGTGGTGGCCGAAACCCTGGCGTGGGGTCGGCGGGCCGAGCAGCATCGTCT CCGGCAGCTGCTTCGCCGTCTTCATCGTCTCCGGCATCACAATTAGGGTTAGACTCATTGCATCAGCAGCAGCTAGGTTCTAGACAGTCATTCCAACAGC AACTACACAGAAAACCTGAAGGGAATGAATCCTTTTTAGCTTATCAAGCGGGAGTTCAAGGGGCATATGGGAGTAACAGTTTCCCATCTTCTAGTGGCAT GCATCTGCCTCAGCAACCTCGTAAATTCATTGATTCAGCTCAACATGGTTCCAACCAGGATGCCCAGCTAAGAGGTCAAGGTGTTGAGCAGCAAATGCGA AATCCTGTTAATCATGCATATCTTCAATATGCTCTCCAGGCACAACAAAAGTCTGCGACGGGAATTCAGTCACAGCAGCATTCTATGATGGCAATGGTAA ACCCGTCACTTCTGAAGGGTCAGGAAATGGGTTCGGGTAATTTGAAAATGCAGGACCTTATGTCTATGCAGGCAATGAATCAAGCGCAAGGATCATCATC CTCTAGGAATTCATCTGAACATGTTGGCCGTGGAGAAAAGCAGATAGAGCAAGGACAGCATATAGCACATGATCAAAAGAGTGATGGAAAACCTTCAAAC CAGGGACCAGCCATCGGTTACTTAATGCCTGAAAATATGATAAAATCAATGCAAGCACCAGAAACTCAGCAAGGCATCCAAAATGCTATGAACACCCAGA TTGCAATGTCTGCTCAATTGCAGGCTGTACAGGCATGGGCTCGAGAACGTAATATTGATTTGTCACATCCTGCAAATGCTAGCTTAATGGCACAACTAAT TCCACTGATGCAGTCAAGGATGGTCCCTCAACCAAAGGCCAACGAGAGCAACGTTGGTGCTCAGTCATCTCCTGCCCCTGTTTCAAAGCAGCAGGTTAAT TCTCCAGCAGTTGCAAGTGAGAGCTCAGCGCATGCCAATTCATCAAGTGATGTGTCCGGGCAGTCAGGTTCTTCAAAAGCAAGGCAGACAGTTCCACCCA GCCATTTTGGCTCAACAACAAATCCTGGTATACCCAGCAACTCCAGCGACATGGTAGTGCAGCAATTCAGTGTTCATGGCAGAGAGTCTCAAACTTCTTT GAAGCAACCAGTAGTATTTGGGAACGGAATTCCCTCTATGCATACTCAGCAGTCTTCTTCCAATGTGAACTTGAATGCAGATAATCCGTTGAATGCAAAA ACTTCATCATCTGGTCCAGAACTTCCACAAATGCAGCACAGCAGGCAGTTAAACCAATCTGCTCCTCAGGCTGGAGGCCAACCTAATGAAGGGGGTTCAG GAAAATTTGCTAGATCTCAAGGGTCACCGGCTCAGATGGCTCAACAACGAAGCGGGTTTACCAAAAAACAGCTTCATGTTCTAAAAGCACAGATACTAGC ATTTAGGCGGCTGAAGAAAGGAGAAGGTACTCTACCCCAAGAACTTCTTCGGGCTATTGCTCCACCTCCTCTTGAGATGCAGATGCGACCCCCAAATCAT CCTTCTGGAGGACAAATTCAAGACAAATCTACTGGAAGTATCATGGCTGAACAACCAAGGCACGTTGAGTCCAATACGAAGGATTCACAATCTTTCCGTG CTGTTAATGGACAGAGTTCTTTAAAGCAGGAATCATTTGGCAGAGATGAGAAATCCACTATGTCATCAGTTCATATGCAAGCTGTTGTGCAATCTGCGTC AAAGGAATCTGCGCCAATGTTATCTGCTGGAAAGGAACAGCAGAAGTCAATGGCAAGCTCTGCTAAGTTAGACCAGGACAGTGAACATGGAAATAACAGA ACTCCTGTTAGGAACGAGTTAGCATTAGATAGGGGAAAGGCTGTTGCACCACAGCCTTCTGTTTCTGACTCAATTCAAACGAAGAAACCTGCACAAGCAA GCACTGTCTCTCAGCCAAAGGATGTAGGATCCACTGGAAAATATCATGGACCCCTATTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCTTTGGGTC CTCGATGATGGTAAACAATAACAATAATATGTCATTGGCATATGATGTCAAAGAGATTCTTTTTGAGGAAGGCATGGAAGTACTTACCAAGAAACGGACA GAAAATCTAAAGAAGATCGAAGGTTTATTAGCAATAAACTTAGAGAGGAAAAGAATTAGACCTGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGC TTCACCTTTTAGATTTTCAAGCACGTTTAAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAG GTTGTGTGATCGTCAGCGTATGGAGCTTGCTAGACAAGTGCAGTCATCTCAGAGAGCTTTGAGGGAGAAGCAACTCAAATCTATTTTTCAGTGGCGTAAG AAGCTTCTTGAGGCACATTGGGCTATTCGTGATGCCCGTACTGCTCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGAGGGAGTTCTCAAAAC GTAAAGATGATGACAGGGACAAAAGGATGGAAGCGTTGAAAAACAATGATGTTGACCGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATGCCTGG TGATGCTGCAGAGAGATATGCTGTTCTTTCATCTTTCTTAAGCCAAACAGAAGAGTATCTACATAAATTAGGAAGTAAGATAACAGCTGCCAAAAATCAA CAGGAAGTGGAAGAGGCAGCAAAAGCTGCTGCAGCTGCAGCACGGTTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAACTTGTGCCGGAGAGG AAATGATGATCAGAAATCATTTTATGGAAATTAATACTCCTAGAGACAGTTCATCTGTTAACAAGTACTACACTCTTGCTCATGCTGTGAATGAAACGGT CATAAGGCAACCATCAATGTTACGAGCTGGAACATTGAGAGACTATCAGCTTGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAATAAGTTAAATGGA ATTTTGGCGGATGAGATGGGTCTTGGCAAAACTGTGCAGGTTATGGCATTGATTGCCTACTTGATGGAGTTTAAGGGAAACTATGGCCCACATCTTATAA TAGTCCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGCTTTATAATTGGTTACCATCTGTGTCATGCATCTTTTATGTTGGAATGAAGGATCAAAGGTC AAAATTATTCTCTCAAGAGGTTTCTGCTATGAAATTTAATGTCCTTGTGACAACTTATGAGTTCATCATGTATGATCGGTCAAAGCTTTCAAAAATTGAT TGGAAGTATATCATAATTGATGAAGCACAGAGAATGAAGGATAGAGATTCGGTTCTTGCCCGTGATCTTGACAAATATCGTTGTCAAAGACGCCTGCTTT TGACTGGAACACCATTGCAGAATGATTTGAAGGAACTCTGGTCCCTTTTAAACTTGCTTCTTCCTGAGGTTTTTGACAATAAGAAAGCCTTTAACGACTG GTTCTCAAAACCATTTCAAAAGGAATGTCCTACTCAAAATGCAGAGGATGATTGGCTTGAGACGGAGAAGAAAGTTATTGTTATCCATAGACTTCATCAG ATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTCGAAGATGTTGAAGGCTCGCTTCCCCCAAAGGTCTCCATAGTTTTAAAATGTAAAATGTCTGCGGTCC AGAGTGCCATTTATGACTGGATTAAATCAACAGGCACTCTTCGTCTTGATCCCGAGGATGAGATGTGTAGGGTTCAAAAGAATCCAGCCTACCAGATGAA GCAATATAAAACTTTAAATAACAGATGTATGGAGCTTCGTAAAACTTGTAATCATCCATTGCTTAACTACCCATTCTTCAGTGACTTATCTAAAGAGTTC ATTGTAAAGTCTTGTGGAAAATTGTGGATCCTGGATAGGATCCTCGTAAAACTTCAAAGAACTGGTCATCGAGTGCTACTGTTCAGTACCATGACAAAAC TCCTTGACATTTTGGAAGAATACCTGCAGTGGCGAAGACTTGTGTTCAGAAGAATTGATGGCACAACTAGTTTGGAAGACCGTGAATCAGCTATAGTGGA CTTCAATAGCCCTGATACAGACTGCTTTATTTTTTTGCTCAGTATCCGAGCTGCTGGGCGTGGTCTTAACCTTCAGTCTGCTGACACAGTTGTCATTTAT GATCCTGATCCAAACCCTAAAAATGAGGAGCAGGCCGTTGCCAGAGCTCATCGCATTGGACAGAAACGAGAAGTCAAAGTTATCTACATGGAAGCAGTTG TTGATAAAATCTCTAGCCATCAGAAGGAGGATGAGCTGAGAAATGGAGGCAGTGTTGATATGGACGATGAACTTGCAGGCAAGGATCGTTACATTGGATC CATTGAGAGCCTCATAAGGAACAACATTCAACAATATAAGATTGATATGGCTGATGAGGTTATCAATGCTGGACGCTTTGATCAAAGAACAACACATGAA GAGAGACGTTTGACTTTGGAGACATTATTACATGATGAAGAGAGGTATCAAGAAAATGTCCATGATGTTCCCTCACTGCAGGAAGTAAATCGCATGATTG CTCGAAGTGAAGAGGAAGTTGAACTGTTTGATCAAATGGATGAGGAACTGGATTGGATTGAGGAGATGACACGGTTTGATCAGGTGCCGAAGTGGCTTCG AGCAGATACAAGAGAAGTGAATGCTGCTATTGCTGCTTCATCAAAAAGACCATCAAAGAATATTTTATCTGGTAGTACTGTGGGCGTCGAAACCAATGAA GTTGGTTCTGAAAGGAGAAGGGGACGACCCAAGGCTAAAAAACATCCTAGTTATAAGGAGGTCGAGGATGATAATGGAGAATATTCTGAAGCAAGCTCTG AGGAAAGAAACGGATATGCACATGAAGAGGGTGAAGTAGCAGAATTTGAAGACGATGGGCATAGTGGGGCTGATGGAGCTCAGCCCATTTATAAAGGTCA ACTGGGAGATGATCTGCTATGCGATGCTGGATATGAATTTCCTCGATCTTCAGAAAGTGCTAAAAATAATCATATGGTTGAAGAAGCTGGCACCTCAGGA TCATCCTCGGACAGTCAAAGATTGGCACAGATATTATCACCATCTGTTTCCTCTCAGAAATTTGGTTCCCTATCTGCGTTAGATGCTAGGCCAAGTTCTG CTTCGAAAAGGATGTCACGTGAGTTAGAGGAAGGGGAAATTGCTGTATCGGGCGATTCTCAGATGGACCATCAGCAGTCTGGAAGTTGGATTCATGATCG TGATGAAGGTGAGGATGAACAAGTTTTGCAGAAACCGAAGATTAAACGTAAACGTAGTCTTCGTGTTCGACCCCGCTATGCTACTGAAAGGTCTGAAGAA AAGTCTACCAATGAGATGGCATCTCATTTAGCAGTCCAAGCACACCATAAATATCAAGTGCAACTCAGGACTGACCTAGAATCAAAATCTGTGGTAGATT CCAATCCCAGCAAGCATGACCAGAACCCATCATCAGTAAAAAATAAGCGAACTTTCCCTTTAAGGAGAGTAGCTAACTCATCCAAATTACATACCTCCTC AAAGTCTAGTCGTTTGAATACTATTTCTGCACATTCAGAGGATGGTGGTGAACATTCCAGAGAAAGATTGGAGGGGAAGCCTATCAATTCAAGTGGATCT TCAGCTCATGGCAGTAAGACGGCTGAAGTCATCCAGAGAAAGTGCAAAAATGTAATTGGCAAGCTCCAAAGGAGAATAGACAAGGAAGGTCATCAAATTG TACCTTTGTTAACAGATTTGTGGAAGAGGGTTGAGAATTCTGGGTACAGTGGTGGATCCGGGAACAGTCTGTTGGATTTAAGAAAGATTGACCAGCGGAT TGATAGATTGGAGTATAGTGGAGCAACAGAGCTTGTATTTGATGTGCAGTTCATGTTAAAGAGTGCAATGCATTTTTATGGTTTTTCACATGAGATAAGA TCTGAAGCAAGGAAGGTTCATGATCTATTTTTCGATATCTTGAAAATCGCATTTCCTGATACCGACTTCCAAGATGCAAGAATTGCACTTTCTTTCTCTG CTCAAGTTCCTGCTGGTACTGTAACATCCCCTAGGCCGGTGGCTGTTGGCCAAAGCAAGAGACACAGGATGACAAACGAGGCCGAAACTGATCCTCCATA CCCGCCACATAAGTCAATGCCTCGCGGATCAGCTTCCAGCAGCGAAAACACCAGGATCAAAGTCCATGCCGCACAGAAAGAATCAAGACCCGGAAGCAGC GCCAGGGAGCAACACCAGCAGGATGATTCTCCAAAGCTCACTCATCCAGGTGAACTGGTTAAATGCAAGAAGAGAAGAAATGATAGGGATAAATCAATTG TGAAGCCTAGGACTGGTCCTGTTTCACCATCTCTCATTGGTCCTACTATAAGAAGTCCAGGGTCAAATTCAGCCCCTAAGGATGCTAGACTTTCTCAGCA GAATCTACATTCACAAGGATGGGGTGGTCACTTATCTCAACAAGCAAATGGGTCTGGTGGTGGCTCAGTTGGATGGGCTAACCCTGTAAAGAGGCTAAGG ACAGATACTGGGAAAAGGAGACCAAGTCATATGTAGATTTGTCAATGATGTTATATAATGTTGGATATATTTCTCTGCTAGTTTCAACAAGAGTTTTAGT GACCCTTACTCTTCATAGTTTCCATAATACAGTTAAATATAGATTTAGGCCCTGAATTGTATTTTATATCTACCTAAACCGGTTTAAAATGCAAGTCCTT TCTCCAATTCTCTTCTTTGTTTGGTATCTGTCTAACATTTCCAACTTCACCTCTCTAAAATATAAGGGTGGTAAGGTGTGTGTATATATATATATCTATA TTTATATTTATTTTAGTTCTTTAAAAGAATGTAG
• Tissue: pods
• Gene name: LI_gene_194465;
• Additional information: details;

Expression of Ll_transcript_465257

FPKM

• PAB: 1.1
• PNAB: 7.6
• PS1: 14.9
• PS2: 8
• PS3: 12.6
• PW1: 8
• PW2: 6.2
• PW3: 2.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465257

• Blastp: ATP-dependent helicase BRM from Arabidopsis with 63.27% of identity
• Blastx: ATP-dependent helicase BRM from Arabidopsis with 63.32% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT2G46020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432983.1)
• Pfam: QLQ (PF08880.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;