Ll_transcript_465258

• Id Trinity: TRINITY_DN52655_c0_g2_i5
• Name Transcript: Ll_transcript_465258
• Sequence: GAGAAATAGGTCCATTCACATTTTTCACTTTCAATACTCTGAACCCCAAAACCAAAAAAAGAGTCTTTTTTTTTTCAAAAAAAGTGCGTAGGGTTTGACC CAAAATTGCACACAATCATGATTCGGACAAGTTTCATCTTCTTCTGAAATATCCACCCTTCATTTGTTCCCGAAAATCACGTTTTTTTAGAGAGAGAAAA TCGGTGTCCGCTTCAGCTATGAACAGAGAGAAAAAAGTGAAAGCATGATGATGCCTTTTTAATTCAAAAAAAGTTTGGGTTTTTCTTGAATTTTGGAGGG ATCTGAGGTTTTTGCATTTTTCTACATGCAATCTGGTGGCAGTGGTGGTGGTGGTGGCCGAAACCCTGGCGTGGGGTCGGCGGGCCGAGCAGCATCGTCT CCGGCAGCTGCTTCGCCGTCTTCATCGTCTCCGGCATCACAATTAGGGTTAGACTCATTGCATCAGCAGCAGCTAGGTTCTAGACAGTCATTCCAACAGC AACTACACAGAAAACCTGAAGGGAATGAATCCTTTTTAGCTTATCAAGCGGGAGTTCAAGGGGCATATGGGAGTAACAGTTTCCCATCTTCTAGTGGCAT GCATCTGCCTCAGCAACCTCGTAAATTCATTGATTCAGCTCAACATGGTTCCAACCAGGATGCCCAGCTAAGAGGTCAAGGTGTTGAGCAGCAAATGCGA AATCCTGTTAATCATGCATATCTTCAATATGCTCTCCAGGCACAACAAAAGTCTGCGACGGGAATTCAGTCACAGCAGCATTCTATGATGGCAATGGTAA ACCCGTCACTTCTGAAGGGTCAGGAAATGGGTTCGGGTAATTTGAAAATGCAGGACCTTATGTCTATGCAGGCAATGAATCAAGCGCAAGGATCATCATC CTCTAGGAATTCATCTGAACATGTTGGCCGTGGAGAAAAGCAGATAGAGCAAGGACAGCATATAGCACATGATCAAAAGAGTGATGGAAAACCTTCAAAC CAGGGACCAGCCATCGGTTACTTAATGCCTGAAAATATGATAAAATCAATGCAAGCACCAGAAACTCAGCAAGGCATCCAAAATGCTATGAACACCCAGA TTGCAATGTCTGCTCAATTGCAGGCTGTACAGGCATGGGCTCGAGAACGTAATATTGATTTGTCACATCCTGCAAATGCTAGCTTAATGGCACAACTAAT TCCACTGATGCAGTCAAGGATGGTCCCTCAACCAAAGGCCAACGAGAGCAACGTTGGTGCTCAGTCATCTCCTGCCCCTGTTTCAAAGCAGCAGGTTAAT TCTCCAGCAGTTGCAAGTGAGAGCTCAGCGCATGCCAATTCATCAAGTGATGTGTCCGGGCAGTCAGGTTCTTCAAAAGCAAGGCAGACAGTTCCACCCA GCCATTTTGGCTCAACAACAAATCCTGGTATACCCAGCAACTCCAGCGACATGGTAGTGCAGCAATTCAGTGTTCATGGCAGAGAGTCTCAAACTTCTTT GAAGCAACCAGTAGTATTTGGGAACGGAATTCCCTCTATGCATACTCAGCAGTCTTCTTCCAATGTGAACTTGAATGCAGATAATCCGTTGAATGCAAAA ACTTCATCATCTGGTCCAGAACTTCCACAAATGCAGCACAGCAGGCAGTTAAACCAATCTGCTCCTCAGGCTGGAGGCCAACCTAATGAAGGGGGTTCAG GAAAATTTGCTAGATCTCAAGGGTCACCGGCTCAGATGGCTCAACAACGAAGCGGGTTTACCAAAAAACAGCTTCATGTTCTAAAAGCACAGATACTAGC ATTTAGGCGGCTGAAGAAAGGAGAAGGTACTCTACCCCAAGAACTTCTTCGGGCTATTGCTCCACCTCCTCTTGAGATGCAGATGCGACCCCCAAATCAT CCTTCTGGAGGACAAATTCAAGACAAATCTACTGGAAGTATCATGGCTGAACAACCAAGGCACGTTGAGTCCAATACGAAGGATTCACAATCTTTCCGTG CTGTTAATGGACAGAGTTCTTTAAAGCAGGAATCATTTGGCAGAGATGAGAAATCCACTATGTCATCAGTTCATATGCAAGCTGTTGTGCAATCTGCGTC AAAGGAATCTGCGCCAATGTTATCTGCTGGAAAGGAACAGCAGAAGTCAATGGCAAGCTCTGCTAAGTTAGACCAGGACAGTGAACATGGAAATAACAGA ACTCCTGTTAGGAACGAGTTAGCATTAGATAGGGGAAAGGCTGTTGCACCACAGCCTTCTGTTTCTGACTCAATTCAAACGAAGAAACCTGCACAAGCAA GCACTGTCTCTCAGCCAAAGGATGTAGGATCCACTGGAAAATATCATGGACCCCTATTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCTTTGGGTC CTCGATGATGGTAAACAATAACAATAATATGTCATTGGCATATGATGTCAAAGAGATTCTTTTTGAGGAAGGCATGGAAGTACTTACCAAGAAACGGACA GAAAATCTAAAGAAGATCGAAGGTTTATTAGCAATAAACTTAGAGAGGAAAAGAATTAGACCTGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGC TTCACCTTTTAGATTTTCAAGCACGTTTAAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAG GTTGTGTGATCGTCAGCGTATGGAGCTTGCTAGACAAGTGCAGTCATCTCAGAGAGCTTTGAGGGAGAAGCAACTCAAATCTATTTTTCAGTGGCGTAAG AAGCTTCTTGAGGCACATTGGGCTATTCGTGATGCCCGTACTGCTCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGAGGGAGTTCTCAAAAC GTAAAGATGATGACAGGGACAAAAGGATGGAAGCGTTGAAAAACAATGATGTTGACCGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATGCCTGG TGATGCTGCAGAGAGATATGCTGTTCTTTCATCTTTCTTAAGCCAAACAGAAGAGTATCTACATAAATTAGGAAGTAAGATAACAGCTGCCAAAAATCAA CAGGAAGTGGAAGAGGCAGCAAAAGCTGCTGCAGCTGCAGCACGGTTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAACTTGTGCCGGAGAGG AAATGATGATCAGAAATCATTTTATGGAAATTAATACTCCTAGAGACAGTTCATCTGTTAACAAGTACTACACTCTTGCTCATGCTGTGAATGAAACGGT CATAAGGCAACCATCAATGTTACGAGCTGGAACATTGAGAGACTATCAGCTTGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAACAAGTTGAATGGA ATTTTGGCGGATGAGATGGGTCTTGGCAAAACTGTGCAGGTTATGGCATTGATTGCCTACTTGATGGAATTTAAGGGAAACTATGGGCCACATCTTATAA TAGTCCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGCTTTATAATTGGTTACCATCTGTGTCATGCATCTATTATGTTGGAACAAAGGATCATAGGTC AAGATTATTTTCTCAAGAGGTTTCTGCTATGAAATTTAATGTCCTTGTGACGACTTATGAGTTCATCATGTATGACCGATCAAAGCTTTCAAAAATTGAT TGGAAGTATATCATAATTGATGAAGCACAGAGAATGAAGGATAGAGATTCGGTTCTTGCCCGTGATCTTGATAGATATCGTTGTCAAAGACGCCTTCTTT TGACAGGAACACCATTACAGAATGATTTGAAGGAACTCTGGTCCCTTTTAAATTTGCTTCTTCCTGAGGTGTTTGACAATAAGAAAGCCTTTAATGACTG GTTCTCGAAACCATTTCAAAAGGAAGCTCCTACTCCAAATGCAGAGGATGATTGGCTTGAGACGGAGAAGAAAGTTATTGTTATCCATAGACTTCATCAG ATTCTTGAGCCTTTCATGCTCAGACGTCGTGTCGAAGATGTTGAAGGTTCTCTTCCACCAAAGGTCTCGATAGTTTTAAAATGTAAAATGTCCGCGGCCC AGAGTGCCATTTATGACTGGATTAAATCAACAGGAACCCTTCGTCTTGATCCTGAGGATGAGATGTGTAAGGTTCAAAAGAATCCAGTTTACCAGATGAA GCAATATAAAACTTTAAATAACAGATGCATGGAGCTTCGTAAAACATGCAACCACCCACTGCTTAACTATCCATTCTTCAGTGACTTATCTAAAGAGTTC ATTGTAAAATCTTGTGGAAAATTGTGGATCCTGGATAGGATCCTTGTAAAACTTGAAAGAACTGGTCATCGGGTGCTACTGTTTAGTACCATGACAAAAC TCCTTGACATTTTGGAAGAATACCTGCAGTGGCGAAGACTTGTGTTCAGAAGAATAGATGGGACAACTAGTTTAGAAGACCGTGAATCAGCTATAATGGA CTTTAATAGCCCTGATTCAGACTGTTTTATTTTCTTGCTTAGCATCCGAGCTGCTGGGCGTGGTCTTAACCTTCAGTCTGCTGACACAGTTGTCATTTAT GATCCTGATCCAAATCCAAAAAATGAGGAGCAGGCTGTTGCGAGAGCTCATCGCATTGGACAGAAACGAGAAGTCAAAGTTATCTACATGGAAGCAGTTG TTGATAAAATCTCTAGCCATCAGAAGGAGGATGAGATGAGAAGTGGAGGCAGTGTTGATATGGAGGATGAACTTGCAGGCAAGGATCGCTACATAGGATC CATTGAAAGCCTCATAAGGAACAATATTCAACAATATAAGATTGATATGGCTGATGAGGTTATCAATGCTGGGCGCTTTGATCAAAGAACAACACACGAA GAGAGACGTTTGACTTTGGAGACATTATTACATGATGAAGAGAGGTATCAAGAAAATGTCCATGATGTTCCCTCACTGCAGGAGGTAAATCGTATGATTG CTAGAAGTGAAGAGGAAGTTGAATTGTTTGATCAAATGGATGAAGAACTGGACTGGATTGAAGAGATGACACGGTTTGATCAGGTGCCTAAGTGGCTTCG AGCAAATACAAGAGAGGTGAATGCTGCTATTGCTGCTTCATCAAAAAGACCATCAAAGAACATTTTATCAGGTAGTACTGTTGGCGTTGAATCCAGTGAA GTTGGTACTGAAAGGAGAAGGGGGCGGCCCAAGGGTAAAAAACATCTTAGTTATAAGGAGGTAGAGGATGATAACGGAGAATATTCTGAAGCAAGCTCCG ATGAAAGAAATGTATATGCACATGAAGAGGGTGAAGTAGGAGAATTTGAAGATGAGGGGTATAGTGGGGCTGAAGGAGCTCAGCCCACTGTTAAAGACCA ATTAGTAGATGATCCTGTATGTAATGCTGGATATGAATTTCCTCGATCATCAGAAAGTGCTAAAAAGAATCAGATGATTGAAGAAGCTGGCTCCTCAGGA TCATCCTCAGACAGTCAAAGATTGAGACAAGCAGTATCACCTTCCGTGTCGTCTCAGAAATTTGGTTCTCTATCTGCATTAGATGCCAGGCCAGGTTCCA CTTCGAAAAGAATGGCAGATGAGTTAGAGGAAGGGGAAATTGCTGTATCAGGTGATTCTCACATGGACCATCAGCAGTCTGAAAGTTGGATTCATGATCG CGATGAAGGTGAGGATGAACAGGTTTTGCAGATGCCCAAGATTAAACGTAAGCGTAGTCTTCGTATTCGACCCCGCCACACTGCTGAAAGGCCTGAAGGA AAATCTACCAATGAGATGACATCTCATTTAGCAGTCCAAGCAGACCATAAATATCATGCACAACTCAGGACTGACCCTGAATCAACAGCTTTTGTTGATT CCAATCCCAGCAAGCATGACCAAAACCCATCATCGGTGAAAAATAAGCGAACTTTACCTTCAAGGAGAGTAGCTAACACATCCAAACTACATGGCTCCCC AAAGTCTAGTCGTTTAAATTCTATTTCTGCTCATTCAGAGGATGGTGGTGAACATTCCAGAGATATCTGGGAAGGGAAGCCTATCAATTCAAGTGGATCT TCAGCTCATGGCAGTAAGACGGCTGAAGTCATCCAGAGAAAGTGCAAAAATGTAATTGGCAAGCTCCAAAGGAGAATAGACAAGGAAGGTCATCAAATTG TACCTTTGTTAACAGATTTGTGGAAGAGGGTTGAGAATTCTGGGTACAGTGGTGGATCCGGGAACAGTCTGTTGGATTTAAGAAAGATTGACCAGCGGAT TGATAGATTGGAGTATAGTGGAGCAATGGAGCTTGTATTTGATGTGCAGTTCATGTTAAAGAGTGCAATGCATTTTTACAGTTTTTCACATGAGGTAAGA TCTGAAGCAAGGAAGGTCCATGACCTATTTTTTGATATCTTGAAAATTGCATTTCCGGATACCGACTTCCAAGATGCAAGAATTGCACTTTCTTTCTCTG CTCAAGTACCTGCGGGTACCGTTACTTCTCCTAGGCCAGTGGCTGTTGGCCAAAGCAAGAGGCACAGGATGGTAAACGAGGTTGAAACTGATCCTCCATA CCCTCCAAAGAAGTCACTTCCGCGTGGATCGGCTTCCAGTGGCGAAAACTCCAGGATCAAAGGCCATCATCATCTGCCACAGAAAGAATCAAGAGCTGGA AGCAGCTCTCGGGAGCAACCTCAGCAGGATGATTCTCCACTGCTAACTCATCCAGGTGAACTGGTTGTATGCAAGAAGAGAAGAAATGACAGGGATAAAT CTTTGGTGAAGCCGAGGACTGGCCCTATTTCACCATCTCGCATAGGTCTCGCCATAAGAAGTCCAGGGTCCGGTTCAGTCCCTAAGGATGCTAGACTAGC TCAGCATAATCCCCATGCACCAGGATGGGCCGGTCAATCATCTCAGCCAGGAAATGGGTCTGGTGGTGGCTCAGTTGGATGGGCTAACCCTGTAAAGAGG CTAAGGTCAGATCCTGGGAAGAGGAGACCAAGTCATATGTAGATTTGTTGAGTATTTGATATAATATACATATTGCTGCTCTACTAGTTTCAGAAAGAGT TTTAGTGGCCTTTTACCTTCATATAGTCTATACCATAATACTGTTAAATATAGAATTAGGCCCTAAGTTGTATTTTTACAGCTACCTTAACTGGTTAAAT GCAAGTCATTCTCCTATTTTCCTTTTTGTTTGGGTATATATATATATATGTACCTTTTCTTTACATAACTCAAACTCTATATAGCAACTTATTGGTTCAT GTTGGTCTTTCTAGAATTGATCCCTATGAGGTCTTGTTTTCATTGGTGCTAGTTCTTTCTTCCAAATTCTTGTGTGAATGATAAGAA
• Tissue: pods
• Gene name: LI_gene_194465;
• Additional information: details;

Expression of Ll_transcript_465258

FPKM

• PAB: 0
• PNAB: 8.8
• PS1: 8.4
• PS2: 3.3
• PS3: 0
• PW1: 4.1
• PW2: 3.7
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465258

• Blastp: ATP-dependent helicase BRM from Arabidopsis with 63.56% of identity
• Blastx: ATP-dependent helicase BRM from Arabidopsis with 63.51% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT2G46020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434058.1)
• Pfam: QLQ (PF08880.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;