| Id Trinity | TRINITY_DN52655_c0_g2_i6 |
|---|---|
| Name Transcript | Ll_transcript_465259 |
| Sequence | GAGAAATAGGTCCATTCACATTTTTCACTTTCAATACTCTGAACCCCAAAACCAAAAAAAGAGTCTTTTTTTTTTCAAAAAAAGTGCGTAGGGTTTGACC CAAAATTGCACACAATCATGATTCGGACAAGTTTCATCTTCTTCTGAAATATCCACCCTTCATTTGTTCCCGAAAATCACGTTTTTTTAGAGAGAGAAAA TCGGTGTCCGCTTCAGCTATGAACAGAGAGAAAAAAGTGAAAGCATGATGATGCCTTTTTAATTCAAAAAAAGTTTGGGTTTTTCTTGAATTTTGGAGGG ATCTGAGTTCTACATGCAATCTGGTGGCAGTGGTGGTGGTGGTGGCCGAAACCCTGGCGTGGGGTCGGCGGGCCGAGCAGCATCGTCTCCGGCAGCTGCT TCGCCGTCTTCATCGTCTCCGGCATCACAATTAGGGTTAGACTCATTGCATCAGCAGCAGCTAGGTTCTAGACAGTCATTCCAACAGCAACTACACAGAA AACCTGAAGGGAATGAATCCTTTTTAGCTTATCAAGCGGGAGTTCAAGGGGCATATGGGAGTAACAGTTTCCCATCTTCTAGTGGCATGCATCTGCCTCA GCAACCTCGTAAATTCATTGATTCAGCTCAACATGGTTCCAACCAGGATGCCCAGCTAAGAGGTCAAGGTGTTGAGCAGCAAATGCGAAATCCTGTTAAT CATGCATATCTTCAATATGCTCTCCAGGCACAACAAAAGTCTGCGACGGGAATTCAGTCACAGCAGCATTCTATGATGGCAATGGTAAACCCGTCACTTC TGAAGGGTCAGGAAATGGGTTCGGGTAATTTGAAAATGCAGGACCTTATGTCTATGCAGGCAATGAATCAAGCGCAAGGATCATCATCCTCTAGGAATTC ATCTGAACATGTTGGCCGTGGAGAAAAGCAGATAGAGCAAGGACAGCATATAGCACATGATCAAAAGAGTGATGGAAAACCTTCAAACCAGGGACCAGCC ATCGGTTACTTAATGCCTGAAAATATGATAAAATCAATGCAAGCACCAGAAACTCAGCAAGGCATCCAAAATGCTATGAACACCCAGATTGCAATGTCTG CTCAATTGCAGGCTGTACAGGCATGGGCTCGAGAACGTAATATTGATTTGTCACATCCTGCAAATGCTAGCTTAATGGCACAACTAATTCCACTGATGCA GTCAAGGATGGTCCCTCAACCAAAGGCCAACGAGAGCAACGTTGGTGCTCAGTCATCTCCTGCCCCTGTTTCAAAGCAGCAGGTTAATTCTCCAGCAGTT GCAAGTGAGAGCTCAGCGCATGCCAATTCATCAAGTGATGTGTCCGGGCAGTCAGGTTCTTCAAAAGCAAGGCAGACAGTTCCACCCAGCCATTTTGGCT CAACAACAAATCCTGGTATACCCAGCAACTCCAGCGACATGGTAGTGCAGCAATTCAGTGTTCATGGCAGAGAGTCTCAAACTTCTTTGAAGCAACCAGT AGTATTTGGGAACGGAATTCCCTCTATGCATACTCAGCAGTCTTCTTCCAATGTGAACTTGAATGCAGATAATCCGTTGAATGCAAAAACTTCATCATCT GGTCCAGAACTTCCACAAATGCAGCACAGCAGGCAGTTAAACCAATCTGCTCCTCAGGCTGGAGGCCAACCTAATGAAGGGGGTTCAGGAAAATTTGCTA GATCTCAAGGGTCACCGGCTCAGATGGCTCAACAACGAAGCGGGTTTACCAAAAAACAGCTTCATGTTCTAAAAGCACAGATACTAGCATTTAGGCGGCT GAAGAAAGGAGAAGGTACTCTACCCCAAGAACTTCTTCGGGCTATTGCTCCACCTCCTCTTGAGATGCAGATGCGACCCCCAAATCATCCTTCTGGAGGA CAAATTCAAGACAAATCTACTGGAAGTATCATGGCTGAACAACCAAGGCACGTTGAGTCCAATACGAAGGATTCACAATCTTTCCGTGCTGTTAATGGAC AGAGTTCTTTAAAGCAGGAATCATTTGGCAGAGATGAGAAATCCACTATGTCATCAGTTCATATGCAAGCTGTTGTGCAATCTGCGTCAAAGGAATCTGC GCCAATGTTATCTGCTGGAAAGGAACAGCAGAAGTCAATGGCAAGCTCTGCTAAGTTAGACCAGGACAGTGAACATGGAAATAACAGAACTCCTGTTAGG AACGAGTTAGCATTAGATAGGGGAAAGGCTGTTGCACCACAGCCTTCTGTTTCTGACTCAATTCAAACGAAGAAACCTGCACAAGCAAGCACTGTCTCTC AGCCAAAGGATGTAGGATCCACTGGAAAATATCATGGACCCCTATTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCTTTGGGTCCTCGATGATGGT AAACAATAACAATAATATGTCATTGGCATATGATGTCAAAGAGATTCTTTTTGAGGAAGGCATGGAAGTACTTACCAAGAAACGGACAGAAAATCTAAAG AAGATCGAAGGTTTATTAGCAATAAACTTAGAGAGGAAAAGAATTAGACCTGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGCTTCACCTTTTAG ATTTTCAAGCACGTTTAAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAGGTTGTGTGATCG TCAGCGTATGGAGCTTGCTAGACAAGTGCAGTCATCTCAGAGAGCTTTGAGGGAGAAGCAACTCAAATCTATTTTTCAGTGGCGTAAGAAGCTTCTTGAG GCACATTGGGCTATTCGTGATGCCCGTACTGCTCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGAGGGAGTTCTCAAAACGTAAAGATGATG ACAGGGACAAAAGGATGGAAGCGTTGAAAAACAATGATGTTGACCGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATGCCTGGTGATGCTGCAGA GAGATATGCTGTTCTTTCATCTTTCTTAAGCCAAACAGAAGAGTATCTACATAAATTAGGAAGTAAGATAACAGCTGCCAAAAATCAACAGGAAGTGGAA GAGGCAGCAAAAGCTGCTGCAGCTGCAGCACGGTTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAACTTGTGCCGGAGAGGAAATGATGATCA GAAATCATTTTATGGAAATTAATACTCCTAGAGACAGTTCATCTGTTAACAAGTACTACACTCTTGCTCATGCTGTGAATGAAACGGTCATAAGGCAACC ATCAATGTTACGAGCTGGAACATTGAGAGACTATCAGCTTGTTGGTTTGCAATGGATGCTTTCTTTGTATAACAACAAGTTGAATGGAATTTTGGCGGAT GAGATGGGTCTTGGCAAAACTGTGCAGGTTATGGCATTGATTGCCTACTTGATGGAATTTAAGGGAAACTATGGGCCACATCTTATAATAGTCCCAAATG CTGTTTTGGTTAACTGGAAGAGTGAGCTTTATAATTGGTTACCATCTGTGTCATGCATCTATTATGTTGGAACAAAGGATCATAGGTCAAGATTATTTTC TCAAGAGGTTTCTGCTATGAAATTTAATGTCCTTGTGACGACTTATGAGTTCATCATGTATGACCGATCAAAGCTTTCAAAAATTGATTGGAAGTATATC ATAATTGATGAAGCACAGAGAATGAAGGATAGAGATTCGGTTCTTGCCCGTGATCTTGATAGATATCGTTGTCAAAGACGCCTTCTTTTGACAGGAACAC CATTACAGAATGATTTGAAGGAACTCTGGTCCCTTTTAAATTTGCTTCTTCCTGAGGTGTTTGACAATAAGAAAGCCTTTAATGACTGGTTCTCGAAACC ATTTCAAAAGGAAGCTCCTACTCCAAATGCAGAGGATGATTGGCTTGAGACGGAGAAGAAAGTTATTGTTATCCATAGACTTCATCAGATTCTTGAGCCT TTCATGCTCAGACGTCGTGTCGAAGATGTTGAAGGTTCTCTTCCACCAAAGGTCTCGATAGTTTTAAAATGTAAAATGTCCGCGGCCCAGAGTGCCATTT ATGACTGGATTAAATCAACAGGAACCCTTCGTCTTGATCCTGAGGATGAGATGTGTAAGGTTCAAAAGAATCCAGTTTACCAGATGAAGCAATATAAAAC TTTAAATAACAGATGCATGGAGCTTCGTAAAACATGCAACCACCCACTGCTTAACTATCCATTCTTCAGTGACTTATCTAAAGAGTTCATTGTAAAATCT TGTGGAAAATTGTGGATCCTGGATAGGATCCTTGTAAAACTTGAAAGAACTGGTCATCGGGTGCTACTGTTTAGTACCATGACAAAACTCCTTGACATTT TGGAAGAATACCTGCAGTGGCGAAGACTTGTGTTCAGAAGAATAGATGGGACAACTAGTTTAGAAGACCGTGAATCAGCTATAATGGACTTTAATAGCCC TGATTCAGACTGTTTTATTTTCTTGCTTAGCATCCGAGCTGCTGGGCGTGGTCTTAACCTTCAGTCTGCTGACACAGTTGTCATTTATGATCCTGATCCA AATCCAAAAAATGAGGAGCAGGCTGTTGCGAGAGCTCATCGCATTGGACAGAAACGAGAAGTCAAAGTTATCTACATGGAAGCAGTTGTTGATAAAATCT CTAGCCATCAGAAGGAGGATGAGCTGAGAAATGGAGGCAGTGTTGATATGGACGATGAACTTGCAGGCAAGGATCGTTACATTGGATCCATTGAGAGCCT CATAAGGAACAACATTCAACAATATAAGATTGATATGGCTGATGAGGTTATCAATGCTGGACGCTTTGATCAAAGAACAACACATGAAGAGAGACGTTTG ACTTTGGAGACATTATTACATGATGAAGAGAGGTATCAAGAAAATGTCCATGATGTTCCCTCACTGCAGGAAGTAAATCGCATGATTGCTCGAAGTGAAG AGGAAGTTGAACTGTTTGATCAAATGGATGAGGAACTGGATTGGATTGAGGAGATGACACGGTTTGATCAGGTGCCGAAGTGGCTTCGAGCAGATACAAG AGAAGTGAATGCTGCTATTGCTGCTTCATCAAAAAGACCATCAAAGAATATTTTATCTGGTAGTACTGTGGGCGTCGAAACCAATGAAGTTGGTTCTGAA AGGAGAAGGGGACGACCCAAGGCTAAAAAACATCCTAGTTATAAGGAGGTCGAGGATGATAATGGAGAATATTCTGAAGCAAGCTCTGAGGAAAGAAACG GATATGCACATGAAGAGGGTGAAGTAGCAGAATTTGAAGACGATGGGCATAGTGGGGCTGATGGAGCTCAGCCCATTTATAAAGGTCAACTGGGAGATGA TCTGCTATGCGATGCTGGATATGAATTTCCTCGATCTTCAGAAAGTGCTAAAAATAATCATATGGTTGAAGAAGCTGGCACCTCAGGATCATCCTCGGAC AGTCAAAGATTGGCACAGATATTATCACCATCTGTTTCCTCTCAGAAATTTGGTTCCCTATCTGCGTTAGATGCTAGGCCAAGTTCTGCTTCGAAAAGGA TGTCACGTGAGTTAGAGGAAGGGGAAATTGCTGTATCGGGCGATTCTCAGATGGACCATCAGCAGTCTGGAAGTTGGATTCATGATCGTGATGAAGGTGA GGATGAACAAGTTTTGCAGAAACCGAAGATTAAACGTAAACGTAGTCTTCGTGTTCGACCCCGCTATGCTACTGAAAGGTCTGAAGAAAAGTCTACCAAT GAGATGGCATCTCATTTAGCAGTCCAAGCACACCATAAATATCAAGTGCAACTCAGGACTGACCTAGAATCAAAATCTGTGGTAGATTCCAATCCCAGCA AGCATGACCAGAACCCATCATCAGTAAAAAATAAGCGAACTTTCCCTTTAAGGAGAGTAGCTAACTCATCCAAATTACATACCTCCTCAAAGTCTAGTCG TTTGAATACTATTTCTGCACATTCAGAGGATGGTGGTGAACATTCCAGAGAAAGATTGGAGGGGAAGCCTATCAATTCAAGTGGATCTTCAGCTCATGGC AGTAAGACGGCTGAAGTCATCCAGAGAAAGTGCAAAAATGTAATTGGCAAGCTCCAAAGGAGAATAGACAAGGAAGGTCATCAAATTGTACCTTTGTTAA CAGATTTGTGGAAGAGGGTTGAGAATTCTGGGTACAGTGGTGGATCCGGGAACAGTCTGTTGGATTTAAGAAAGATTGACCAGCGGATTGATAGATTGGA GTATAGTGGAGCAACAGAGCTTGTATTTGATGTGCAGTTCATGTTAAAGAGTGCAATGCATTTTTATGGTTTTTCACATGAGATAAGATCTGAAGCAAGG AAGGTTCATGATCTATTTTTCGATATCTTGAAAATCGCATTTCCTGATACCGACTTCCAAGATGCAAGAATTGCACTTTCTTTCTCTGCTCAAGTTCCTG CTGGTACTGTAACATCCCCTAGGCCGGTGGCTGTTGGCCAAAGCAAGAGACACAGGATGACAAACGAGGCCGAAACTGATCCTCCATACCCGCCACATAA GTCAATGCCTCGCGGATCAGCTTCCAGCAGCGAAAACACCAGGATCAAAGTCCATGCCGCACAGAAAGAATCAAGACCCGGAAGCAGCGCCAGGGAGCAA CACCAGCAGGATGATTCTCCAAAGCTCACTCATCCAGGTGAACTGGTTAAATGCAAGAAGAGAAGAAATGATAGGGATAAATCAATTGTGAAGCCTAGGA CTGGTCCTGTTTCACCATCTCTCATTGGTCCTACTATAAGAAGTCCAGGGTCAAATTCAGCCCCTAAGGATGCTAGACTTTCTCAGCAGAATCTACATTC ACAAGGATGGGGTGGTCACTTATCTCAACAAGCAAATGGGTCTGGTGGTGGCTCAGTTGGATGGGCTAACCCTGTAAAGAGGCTAAGGACAGATACTGGG AAAAGGAGACCAAGTCATATGTAGATTTGTCAATGATGTTATATAATGTTGGATATATTTCTCTGCTAGTTTCAACAAGAGTTTTAGTGACCCTTACTCT TCATAGTTTCCATAATACAGTTAAATATAGATTTAGGCCCTGAATTGTATTTTATATCTACCTAAACCGGTTTAAAATGCAAGTCCTTTCTCCAATTCTC TTCTTTGTTTGGTATCTGTCTAACATTTCCAACTTCACCTCTCTAAAATATAAGGGTGGTAAGGTGTGTGTATATATATATATCTATATTTATATTTATT TTAGTTCTTTAAAAGAATGTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_194465; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465259
| Blastp | ATP-dependent helicase BRM from Arabidopsis with 63.13% of identity |
|---|---|
| Blastx | ATP-dependent helicase BRM from Arabidopsis with 63.18% of identity |
| Eggnog | helicase(COG0553) |
| Kegg | Link to kegg annotations (AT2G46020) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432983.1) |
| Pfam | QLQ (PF08880.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |