Ll_transcript_465261

• Id Trinity: TRINITY_DN52655_c0_g2_i8
• Name Transcript: Ll_transcript_465261
• Sequence: TTAAAAGAATACTTCTCGTGAATCAGTAACCGTAGCAATCCCACCTCATTGTTTTTTTTGGCATAACAACAAAGAGAGACGGTCCCTTCACATTTTCACT TCTAATACTCTGAACCCAAAACAAAAATATATATTTTTTTTCATAAAGAAATTTTTTTGTTAGGGTTTGACCCAAAATTGAACACAATCGCGTAGTGCAA ACAACCATGATTCAGACACCTTTTCCTCTTTCCTCCTGAAGAAAGATCCACCCTTTTCCTTTGTTCCGAAAATCACGTTTTTAGAGAGAAAATCGGTGGT AGCTTCAGTTAGAGAGAGAAATGGTGGAACCATGATGATGTTGTTTTTAATCAAAAAAAGTTTTGTTTTTTTCGTGAATTTTAGAGGGATCTGAGGTTAT TGCATTTGTGGGTCTGTTCAGTTTTATGAATTTTGCTTTTTTAATTTTTGGGGGTTTCTACTGTTGACTGATCTAAATTGAGGGTTTTTGGTTATTCACA TCGAGTTCTGCATGCAATCTAGTGGAGGTGGTGGTGGTGGCTGGAACCCCGGTGCGGGGCCGGCGGGCCGGGCAGCTTCGTCACCGGCTGCGGCTTCGCC ATCTTCTTCGTCCTCAGCGTCACAATTAGGGTTAGACTCATTGCATCAGCATCACCAGCAGCAGCAGCAGCAGCAACATCAGATAGGTTCTAGACAGTCA TTCCAACAGCAACTACTTAGAAAACCTGAAGGGAATGAAGCTTTTTTAGCTTATCAAGCTGGGCTTCAAGGGGCATATGGGAGTAACAGTTTCTCATCTC CTAGTTCCATGCATCTGCCTCAGCAGTCTCGAAAATTCACCGATTCAGCTCAACATGGTTCGGGCCAGGATACCCAGCTAAGGGGTCAAGGTGTTGAGCA GCAAATGCTAAATCCTGTCCATCAAGCATACCTTCAGTATGCTCTCCAGGCACAACAAAAGTCTGCTTTGGGAATTCAGTCACAGCAGCATCCTAAGATG GGGATGTTAAACCCTTCATCTATGAAGGATCAGGAAATGCGTATGGGTAATTTGAAAATGCAGGACCTTATGTCTATGCAGGCAGTGAATCAAGCTCAAG GATCATCATCCTCTAGGAATTCATCGGAACATGTTGCTCGTGGGGAAAAGCAGATAGAGCATGGACAGCAGATGGCACATGATCAGAAGAGTGATGGAAA GCCTTCAAACCAGAGTGCCATTGGTCACTTAATGCCTGGGAATATGATAAGATCAACGCAAGCACCAGAAACTCATCAGGGCATCCAAAATGTTATGAAC ACCCAGGTTGCAATGTCTGCTCAATTGCAGGCTATACAGGCATGGGCACGAGAACGTAATATTGATTTGTCACATCCTGCAAATGCCAACTTAATGGCAC AGCTAATGCCACTGATGCAGTCAAGGATGGTTCCTCAACCAAAGGCCAATGAGAGCAATATTGGTTCTCAGTCATCTCCTGCCCCTGTTTCAAAGCAGCA GGTTATTTCTCCAGCAGTTGCGAGTGAGAACTCAGCACATGCTAATTCATCAAGTGATGTGTCTGGGCAGTCAGGTTCTTCAAAAGCCAGGCAGACAGTT CCACCCAGCCATTTTGGGTCAACACCGAATGCTGGCATGTCCAGTAACTCCAATGACATGGTAATGCAGCAATTCAGTGATCATGGAAGAGAGTCTCAAG CTTCTTTGAAGCAACCAATAATAGTTGGGAACGGAATTCCCTCTATGCATACTCAGCAGTCTTCTTCCAATGTGAACTTGAATGCAGATAACCCTCTGAA TGCAAAAATTTCACCATCTGGTCCAGAACCTCCACAAATGCAGCAAATCAGGCAGTTAAACCAATCTGCTCCTCAAGCTGGAGGTCCAATTAATGAAGGG GGTTCAGGTAATTATTCCAGATCTCAAGGTTCACCTGCTCAGATGCGTCAACAACAAAGCAAGTTTACCAAACAACAGCTTCATGTTCTTAAAGCACAGA TACTAGCATTTAGGCGGCTGAAGAAAGGAGAAGGTACTCTACCCCAAGAACTTCTTCGGGCTATTGCTCCACCTCCTCTTGATATGCAGGTGCAACCCCC ACATCAACCTTCTGGAGGACAAAATCAAGACAAATCTACAGGAAATATTGTGGCTGAACAACCAAGGCATATTGAGTCCCATGCCAAGGATTCACAATCT ATCCCGGCTATTAATGGACAGAGTTCTTTAAAGCAGGAATCGGTTGCCAGAGATGAGAAATCCACCATGCTACCTGCTCACGTGCAAGCTGTTGTGCCCC CCATGTCAAAGGAATCTGCACAAATGTTATCTGTTGGAAAGGAACATCAGAAGTCAATTGCAAGCTCTGCTAAGTCAGACCAGGACAATGAACATGGAGA TAACAGAACTCCTATTAGAAGCGAGTTAGCACTAGATAGGGGTAAGGCCATTGCACCACAGCCTTCTGTGCCTGACTCAATGCAAATGAAGAAACCTGAA CAAGTAAGCACTGTGTCTCAGCCAAAGGATGCGGGTTCCACCAGAAAATATCATGGTCCCCTATTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCT TTGGGTCCTCGATGATGGTAAACAATAACAATAATTTGTCACTGGCATATGATGTCAACGAGATTCTTTTTGAGGAAGGCATGGAAGTACTTACCAAGAA ACGGACAGAAAAATTGAAGAAGATCGAAGGTTTATTGTCAGTAAACTTAGAGAGGAAAAGAATTAGACCTGATCTTGTTTTGAGGCTGCAAATTGAAGAG AAAAAGCTTCGCCTTTTAGATCTTCAAGCACGTTTAAGGAATGAGATTGATCAACATCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGT TTGTTAGGCTGTGTGAGCGTCAGCGTATGGAGCTTGCTAGACAAGTGCAGACATCTCAGAGAGCTTTAAGGGAGAAGCAACTCAAATCTATATTTCAGTG GCGGAAGAAGCTTCTTGAGGCACACTGGGCTATTCGTGATGCCCGCACTGCCCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGAGGGAGTTC TCAAAACGTAAAGATGATGACAGGGACAAAAGGATGGAAGCGTTGAAAAACAATGATGTTGACCG
• Tissue: pods
• Gene name: LI_gene_194465;
• Additional information: details;

Expression of Ll_transcript_465261

FPKM

• PAB: 0.5
• PNAB: 8.1
• PS1: 15.2
• PS2: 8.8
• PS3: 9.6
• PW1: 8.8
• PW2: 8.4
• PW3: 5.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465261

• Blastp: ATP-dependent helicase BRM from Arabidopsis with 51.29% of identity
• Blastx: ATP-dependent helicase BRM from Arabidopsis with 51.52% of identity
• Eggnog: helicase(COG0553)
• Kegg: Link to kegg annotations (AT2G46020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434058.1)
• Pfam: QLQ (PF08880.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;