Ll_transcript_465262

Id TrinityTRINITY_DN52655_c0_g2_i9
Name TranscriptLl_transcript_465262
SequenceGAGAAATAGGTCCATTCACATTTTTCACTTTCAATACTCTGAACCCCAAAACCAAAAAAAGAGTCTTTTTTTTTTCAAAAAAAGTGCGTAGGGTTTGACC CAAAATTGCACACAATCATGATTCGGACAAGTTTCATCTTCTTCTGAAATATCCACCCTTCATTTGTTCCCGAAAATCACGTTTTTTTAGAGAGAGAAAA TCGGTGTCCGCTTCAGCTATGAACAGAGAGAAAAAAGTGAAAGCATGATGATGCCTTTTTAATTCAAAAAAAGTTTGGGTTTTTCTTGAATTTTGGAGGG ATCTGAGGTTTTTGCATTTTTCTACATGCAATCTGGTGGCAGTGGTGGTGGTGGTGGCCGAAACCCTGGCGTGGGGTCGGCGGGCCGAGCAGCATCGTCT CCGGCAGCTGCTTCGCCGTCTTCATCGTCTCCGGCATCACAATTAGGGTTAGACTCATTGCATCAGCAGCAGCTAGGTTCTAGACAGTCATTCCAACAGC AACTACACAGAAAACCTGAAGGGAATGAATCCTTTTTAGCTTATCAAGCGGGAGTTCAAGGGGCATATGGGAGTAACAGTTTCCCATCTTCTAGTGGCAT GCATCTGCCTCAGCAACCTCGTAAATTCATTGATTCAGCTCAACATGGTTCCAACCAGGATGCCCAGCTAAGAGGTCAAGGTGTTGAGCAGCAAATGCGA AATCCTGTTAATCATGCATATCTTCAATATGCTCTCCAGGCACAACAAAAGTCTGCGACGGGAATTCAGTCACAGCAGCATTCTATGATGGCAATGGTAA ACCCGTCACTTCTGAAGGGTCAGGAAATGGGTTCGGGTAATTTGAAAATGCAGGACCTTATGTCTATGCAGGCAATGAATCAAGCGCAAGGATCATCATC CTCTAGGAATTCATCTGAACATGTTGGCCGTGGAGAAAAGCAGATAGAGCAAGGACAGCATATAGCACATGATCAAAAGAGTGATGGAAAACCTTCAAAC CAGGGACCAGCCATCGGTTACTTAATGCCTGAAAATATGATAAAATCAATGCAAGCACCAGAAACTCAGCAAGGCATCCAAAATGCTATGAACACCCAGA TTGCAATGTCTGCTCAATTGCAGGCTGTACAGGCATGGGCTCGAGAACGTAATATTGATTTGTCACATCCTGCAAATGCTAGCTTAATGGCACAACTAAT TCCACTGATGCAGTCAAGGATGGTCCCTCAACCAAAGGCCAACGAGAGCAACGTTGGTGCTCAGTCATCTCCTGCCCCTGTTTCAAAGCAGCAGGTTAAT TCTCCAGCAGTTGCAAGTGAGAGCTCAGCGCATGCCAATTCATCAAGTGATGTGTCCGGGCAGTCAGGTTCTTCAAAAGCAAGGCAGACAGTTCCACCCA GCCATTTTGGCTCAACAACAAATCCTGGTATACCCAGCAACTCCAGCGACATGGTAGTGCAGCAATTCAGTGTTCATGGCAGAGAGTCTCAAACTTCTTT GAAGCAACCAGTAGTATTTGGGAACGGAATTCCCTCTATGCATACTCAGCAGTCTTCTTCCAATGTGAACTTGAATGCAGATAATCCGTTGAATGCAAAA ACTTCATCATCTGGTCCAGAACTTCCACAAATGCAGCACAGCAGGCAGTTAAACCAATCTGCTCCTCAGGCTGGAGGCCAACCTAATGAAGGGGGTTCAG GAAAATTTGCTAGATCTCAAGGGTCACCGGCTCAGATGGCTCAACAACGAAGCGGGTTTACCAAAAAACAGCTTCATGTTCTAAAAGCACAGATACTAGC ATTTAGGCGGCTGAAGAAAGGAGAAGGTACTCTACCCCAAGAACTTCTTCGGGCTATTGCTCCACCTCCTCTTGAGATGCAGATGCGACCCCCAAATCAT CCTTCTGGAGGACAAATTCAAGACAAATCTACTGGAAGTATCATGGCTGAACAACCAAGGCACGTTGAGTCCAATACGAAGGATTCACAATCTTTCCGTG CTGTTAATGGACAGAGTTCTTTAAAGCAGGAATCATTTGGCAGAGATGAGAAATCCACTATGTCATCAGTTCATATGCAAGCTGTTGTGCAATCTGCGTC AAAGGAATCTGCGCCAATGTTATCTGCTGGAAAGGAACAGCAGAAGTCAATGGCAAGCTCTGCTAAGTTAGACCAGGACAGTGAACATGGAAATAACAGA ACTCCTGTTAGGAACGAGTTAGCATTAGATAGGGGAAAGGCTGTTGCACCACAGCCTTCTGTTTCTGACTCAATTCAAACGAAGAAACCTGCACAAGCAA GCACTGTCTCTCAGCCAAAGGATGTAGGATCCACTGGAAAATATCATGGACCCCTATTTGATTTTCCTTTCTTCACTAGGAAACATGACTCCTTTGGGTC CTCGATGATGGTAAACAATAACAATAATATGTCATTGGCATATGATGTCAAAGAGATTCTTTTTGAGGAAGGCATGGAAGTACTTACCAAGAAACGGACA GAAAATCTAAAGAAGATCGAAGGTTTATTAGCAATAAACTTAGAGAGGAAAAGAATTAGACCTGATCTTGTTTTGAGGCTGCAAATTGAAGAGAAAAAGC TTCACCTTTTAGATTTTCAAGCACGTTTAAGGGATGAGATTGATCAACAGCAACAAGAGATAATGGCAATGCCAGATAGGCCATATCGTAAGTTTGTTAG GTTGTGTGATCGTCAGCGTATGGAGCTTGCTAGACAAGTGCAGTCATCTCAGAGAGCTTTGAGGGAGAAGCAACTCAAATCTATTTTTCAGTGGCGTAAG AAGCTTCTTGAGGCACATTGGGCTATTCGTGATGCCCGTACTGCTCGCAACAGGGGGGTGGCCAAATATCATGAGAGGATGTTGAGGGAGTTCTCAAAAC GTAAAGATGATGACAGGGACAAAAGGATGGAAGCGTTGAAAAACAATGATGTTGACCGATATAGGGAGATGTTGCTGGAGCAGCAGACTAGCATGCCTGG TGATGCTGCAGAGAGATATGCTGTTCTTTCATCTTTCTTAAGCCAAACAGAAGAGTATCTACATAAATTAGGAAGTAAGATAACAGCTGCCAAAAATCAA CAGGAAGTGGAAGAGGCAGCAAAAGCTGCTGCAGCTGCAGCACGGTTGCAGGGTCTTTCTGAAGAAGAAGTCAGAGCAGCTGCAACTTGTGCCGGAGAGG AAATGATGATCAGAAATCATTTTATGGAAATTAATACTCCTAGAGACAGTTCATCTGTTAACAAGTCAGTTTTGTTAGTTAACTTTTTGTGCACTGTCTT GATTTCTGGCATAAAAAAGCTGAGAGGATATGTTTTTCAGTGAAAGTTGTTGGCTCAATGTCTTTATGCTTTTTTTAACTCTAAATTAAATGCCCTGTTC TTGTTTATATAACTAATTAACTATGTTTGCAGAACTTTTTATAATTGGTTCTTTATGATAGTATGTATCTGATGCTTGATGGTACCCTTATTGGATGCTT TCCAGATACTACAGTCTTGCTCATGCTGTGAATGAAACGGTTATTAGGCAACCATCAATGTTACGAGCTGGAACATTGAGAGACTATCAGCTTGTAGGTT GCTACATTATGTGAAAGAGTTATTCTTTCAGTTATGGTTTTGACTTCAGCAAGTTTTAAGGCTTTGACGCATTATTTTTTTTAAGGTTGGTTTGCAATGG ATGCTTTCTTTGTATAACAATAAGTTAAATGGAATTTTGGCGGATGAGATGGGTCTTGGCAAAACTGTGCAGGTTATGGCATTGATTGCCTACTTGATGG AGTTTAAGGGAAACTATGGCCCACATCTTATAATAGTCCCAAATGCTGTTTTGGTTAACTGGAAGAGTGAGCTTTATAATTGGTTACCATCTGTGTCATG CATCTTTTATGTTGGAATGAAGGATCAAAGGTCAAAATTATTCTCTCAAGAGGTTTCTGCTATGAAATTTAATGTCCTTGTGACAACTTATGAGTTCATC ATGTATGATCGGTCAAAGCTTTCAAAAATTGATTGGAAGTATATCATAATTGATGAAGCACAGAGAATGAAGGATAGAGATTCGGTTCTTGCCCGTGATC TTGACAAATATCGTTGTCAAAGACGCCTGCTTTTGACTGGAACACCATTGCAGAATGATTTGAAGGAACTCTGGTCCCTTTTAAACTTGCTTCTTCCTGA GGTTTTTGACAATAAGAAAGCCTTTAACGACTGGTTCTCAAAACCATTTCAAAAGGAATGTCCTACTCAAAATGCAGAGGATGATTGGCTTGAGACGGAG AAGAAAGTTATTGTTATCCATAGACTTCATCAGATTCTTGAGCCTTTCATGCTCAGGCGTCGTGTCGAAGATGTTGAAGGCTCGCTTCCCCCAAAGGTCT CCATAGTTTTAAAATGTAAAATGTCTGCGGTCCAGAGTGCCATTTATGACTGGATTAAATCAACAGGCACTCTTCGTCTTGATCCCGAGGATGAGATGTG TAGGGTTCAAAAGAATCCAGCCTACCAGATGAAGCAATATAAAACTTTAAATAACAGATGTATGGAGCTTCGTAAAACTTGTAATCATCCATTGCTTAAC TACCCATTCTTCAGTGACTTATCTAAAGAGTTCATTGTAAAGTCTTGTGGAAAATTGTGGATCCTGGATAGGATCCTCGTAAAACTTCAAAGAACTGGTC ATCGAGTGCTACTGTTCAGTACCATGACAAAACTCCTTGACATTTTGGAAGAATACCTGCAGTGGCGAAGACTTGTGTTCAGAAGAATTGATGGCACAAC TAGTTTGGAAGACCGTGAATCAGCTATAGTGGACTTCAATAGCCCTGATACAGACTGCTTTATTTTTTTGCTCAGTATCCGAGCTGCTGGGCGTGGTCTT AACCTTCAGTCTGCTGACACAGTTGTCATTTATGATCCTGATCCAAACCCTAAAAATGAGGAGCAGGCCGTTGCCAGAGCTCATCGCATTGGACAGAAAC GAGAAGTCAAAGTTATCTACATGGAAGCAGTTGTTGATAAAATCTCTAGCCATCAGAAGGAGGATGAGCTGAGAAATGGAGGCAGTGTTGATATGGACGA TGAACTTGCAGGCAAGGATCGTTACATTGGATCCATTGAGAGCCTCATAAGGAACAACATTCAACAATATAAGATTGATATGGCTGATGAGGTTATCAAT GCTGGACGCTTTGATCAAAGAACAACACATGAAGAGAGACGTTTGACTTTGGAGACATTATTACATGATGAAGAGAGGTATCAAGAAAATGTCCATGATG TTCCCTCACTGCAGGAAGTAAATCGCATGATTGCTCGAAGTGAAGAGGAAGTTGAACTGTTTGATCAAATGGATGAGGAACTGGATTGGATTGAGGAGAT GACACGGTTTGATCAGGTGCCGAAGTGGCTTCGAGCAGATACAAGAGAAGTGAATGCTGCTATTGCTGCTTCATCAAAAAGACCATCAAAGAATATTTTA TCTGGTAGTACTGTGGGCGTCGAAACCAATGAAGTTGGTTCTGAAAGGAGAAGGGGACGACCCAAGGCTAAAAAACATCCTAGTTATAAGGAGGTCGAGG ATGATAATGGAGAATATTCTGAAGCAAGCTCTGAGGAAAGAAACGGATATGCACATGAAGAGGGTGAAGTAGCAGAATTTGAAGACGATGGGCATAGTGG GGCTGATGGAGCTCAGCCCATTTATAAAGGTCAACTGGGAGATGATCTGCTATGCGATGCTGGATATGAATTTCCTCGATCTTCAGAAAGTGCTAAAAAT AATCATATGGTTGAAGAAGCTGGCACCTCAGGATCATCCTCGGACAGTCAAAGATTGGCACAGATATTATCACCATCTGTTTCCTCTCAGAAATTTGGTT CCCTATCTGCGTTAGATGCTAGGCCAAGTTCTGCTTCGAAAAGGATGTCACGTGAGTTAGAGGAAGGGGAAATTGCTGTATCGGGCGATTCTCAGATGGA CCATCAGCAGTCTGGAAGTTGGATTCATGATCGTGATGAAGGTGAGGATGAACAAGTTTTGCAGAAACCGAAGATTAAACGTAAACGTAGTCTTCGTGTT CGACCCCGCTATGCTACTGAAAGGTCTGAAGAAAAGTCTACCAATGAGATGGCATCTCATTTAGCAGTCCAAGCACACCATAAATATCAAGTGCAACTCA GGACTGACCTAGAATCAAAATCTGTGGTAGATTCCAATCCCAGCAAGCATGACCAGAACCCATCATCAGTAAAAAATAAGCGAACTTTCCCTTTAAGGAG AGTAGCTAACTCATCCAAATTACATACCTCCTCAAAGTCTAGTCGTTTGAATACTATTTCTGCACATTCAGAGGATGGTGGTGAACATTCCAGAGAAAGA TTGGAGGGGAAGCCTATCAATTCAAGTGGATCTTCAGCTCATGGCAGTAAGACGGCTGAAGTCATCCAGAGAAAGTGCAAAAATGTAATTGGCAAGCTCC AAAGGAGAATAGACAAGGAAGGTCATCAAATTGTACCTTTGTTAACAGATTTGTGGAAGAGGGTTGAGAATTCTGGGTACAGTGGTGGATCCGGGAACAG TCTGTTGGATTTAAGAAAGATTGACCAGCGGATTGATAGATTGGAGTATAGTGGAGCAACAGAGCTTGTATTTGATGTGCAGTTCATGTTAAAGAGTGCA ATGCATTTTTATGGTTTTTCACATGAGATAAGATCTGAAGCAAGGAAGGTTCATGATCTATTTTTCGATATCTTGAAAATCGCATTTCCTGATACCGACT TCCAAGATGCAAGAATTGCACTTTCTTTCTCTGCTCAAGTTCCTGCTGGTACTGTAACATCCCCTAGGCCGGTGGCTGTTGGCCAAAGCAAGAGACACAG GATGACAAACGAGGCCGAAACTGATCCTCCATACCCGCCACATAAGTCAATGCCTCGCGGATCAGCTTCCAGCAGCGAAAACACCAGGATCAAAGTCCAT GCCGCACAGAAAGAATCAAGACCCGGAAGCAGCGCCAGGGAGCAACACCAGCAGGATGATTCTCCAAAGCTCACTCATCCAGGTGAACTGGTTAAATGCA AGAAGAGAAGAAATGATAGGGATAAATCAATTGTGAAGCCTAGGACTGGTCCTGTTTCACCATCTCTCATTGGTCCTACTATAAGAAGTCCAGGGTCAAA TTCAGCCCCTAAGGATGCTAGACTTTCTCAGCAGAATCTACATTCACAAGGATGGGGTGGTCACTTATCTCAACAAGCAAATGGGTCTGGTGGTGGCTCA GTTGGATGGGCTAACCCTGTAAAGAGGCTAAGGACAGATACTGGGAAAAGGAGACCAAGTCATATGTAGATTTGTCAATGATGTTATATAATGTTGGATA TATTTCTCTGCTAGTTTCAACAAGAGTTTTAGTGACCCTTACTCTTCATAGTTTCCATAATACAGTTAAATATAGATTTAGGCCCTGAATTGTATTTTAT ATCTACCTAAACCGGTTTAAAATGCAAGTCCTTTCTCCAATTCTCTTCTTTGTTTGGTATCTGTCTAACATTTCCAACTTCACCTCTCTAAAATATAAGG GTGGTAAGGTGTGTGTATATATATATATCTATATTTATATTTATTTTAGTTCTTTAAAAGAATGTAG BLAST
Tissuepods
Gene nameLI_gene_194465; 
Additional informationdetails; 

Expression of Ll_transcript_465262

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_465262
BlastpATP-dependent helicase BRM from Arabidopsis with 69.55% of identity
BlastxATP-dependent helicase BRM from Arabidopsis with 69.6% of identity
Eggnoghelicase(COG0553)
KeggLink to kegg annotations (AT2G46020)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432983.1)
PfamSNF2 family N-terminal domain (PF00176.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;