Ll_transcript_462826

• Id Trinity: TRINITY_DN52657_c0_g3_i7
• Name Transcript: Ll_transcript_462826
• Sequence: GTTTCGGGCGTGGTACTTAGCATCTCAAAATATAAATATCCCACATCCTCTTCATTCTTCATTCTTTCACTCTCAATTTCTCGACTCTCTCTATTGCTTC GTTTTTCTCTCATTCGCACTGCGATTATTTTCTTTGTTTCTCACTCTTTCTCTTGTTTTTAAATTCTTATTGTGTTTCGTAGCTTTTTCCAATCATGGCC AGAGGCGTAATCTCAGACGACGAAGATGAGGTTGAACTCGATGAGGAAGAGAGGGAACCCGTCGATGGGGATGGATTGGATGAGGGTCGCGATGTGGATG ATGATGAAGAGGATGAAGAAGAAGAAGGGCAGGATGAATATGAAAATGATGGATTTATAGTTGATGAGGATGAAGAGGAGCAGGATGAAGAAGAGAGAGC AGAAAGTGACGAGGAACGCCAGAAGAGGAGAAAGAAGAAGAGAAAGGAGGAATATGTCCTTGATGAAGATGATTATGAGCTGCTGGAAGACAATAACATC AATATTCATCGTCGGAAGGACATTAAAAAGTTCAAGCGACTGAAAAAAGGCCAGAGGGATACTGAGGAGGAGCCGTCTGGGCTATCTGATGAGGAGGATT TTGTTGGAAGTGGTAAAGTTGGGCGAACTGCTGAGGAGAAGCTTAAACACCGTTTATTTGGCGATGATGAAGGAGCTCCACTTGAGGATATTGCTGAAGA TGAGGAACAAGGAGAGGAGGAGGAGGAGGATGCAGACATTGGAGAAGATGATGAAATGGCCGACTTCATTGTGGATGAAGAAGAAGTTGATGAGAATGGA GCTCCCATGAGACGAACAAAGCCGAAGAAAAAAATTAGGCAGGCACCTGGAGTCTCTTCCTCAGCTGTTCAAGAAGCTCAAGATATATTCGGTGATGTTG ACAACTTTCTGCTGACTCGCAAGAAAAATCTGGAGTCAAATGAATATAGAGAGACTAGACTTGAAGATGAATTTGAGCCGATTATTCTTTCTGAGAAGTA TATGAGAGAGGAGGATGACCAGATTAGGGAAGTTGATCTTCCAGAGAGAATGCAGATATCGGAGATGAGTACTGGTACTCCTCCACTGGATGGAAGTATA GATGAAGAGAGCCGGTGGATAGTTAAGCAACTTAGTGATGGAGCAGTCCCTTGGATTTGCAAAAAAAATCCAACCTCCCAAAATAATAGAAAGAACCTAC CAATTGACGAGAATGATATTATCAGATTTTTGGAACTGTATCATGTGCAAAAATTAGATATTCCTTTTATTGCTATGTATCGGAAGGAAGAGTGCTTAAG CCTGTTGAAAGACCTAGAGCGACCCGAAGCTGGAGGTGAGAGTTCGGATAAGAATAACATGACACCTACTCTAAAGTGGCACAAGGTGCTTTGGGCTCTT CTGGACTTGGACAGAAAGTGGTTGCTTCTTCAGAAGCGGAAGGGTGCCTTAGAGTCATACTATACTAAACGGTTTGAAGAGGAGTCCCGGCGTATTTATG ATGAAACAAGACTAAACTTGAACCGGCAATTATTTGAATCAGTTATGAGATCATTGAAGGATGCAGAATCTGAGAGGGAGGTCGATGATGTTGACTCCAA GTTCAACTTGCATTTCCCACCAGGTGAGGCTGGTGTTGATGAAGGACAGTACAAGAGGCCAAAAAGGAAGTCAGTATATAGCACTTACTGTAAGGCAGGC CTGTGGGAGGTTGCGAACAGGTTTGGATGTAGTTCTGAGCAGCTTGGAATATGTCTATCTGAAGTTAAGGTGCCTGAGTTGGTAGACCCAAAGGAAACAC CAGAGGAGATGGCTTCAAACTTTACATGTGCTATGTATAATACCCCTGAAGAAGTACTTAAATGTGCTAGGCACATGGCAGCTATTGAGGTAAGTTGCGA GCCTAGCATTAGGAAACATGTTCGTAGCCACTTTCTTGATCATGCTGTGGTGTCAACATGTCCTACTGCTGATGGGAATGTGGCAATAGATTCTTTTCAT GACTTCGCTGTGGTAAAGTGGCTCCGAGAGAAGCCTCTGTCTAAATTTGACGATGCACAGTGGCTTCTTATACAGAAGGCAGAAGAGGAGAAACTTCTTC AAGTCACTATTAAGCTTCCTGAAGAGAATCTTAATAAATTAATTGACCAATTCAATGAGTATTATGTTAGCGATAGTGTTAGCAGATCTGCTCAGCTGTG GAATGAACAGAGGAAGTTGATACTGAAAGATGCAATTTTTCGCCTTCTTTTACCATCAATGGACAAAGAGGCAAGAGGTGTATTGGCAAGCAAAGCAAAG AATTGGCTACTTATGGAGTACGGGAATGCCTTGTGGAATAAGGTTTCTGTGGGACCTTATCAACAGAAGGAGAATGATCTTAGCTCTGATGATGAGGCTG CTCCTAGGGTTATGGCCTGCTGTTGGGGCCCTGGAAAGCCGCAAACAACATTTGTTATGTTGGATTCATCAGGGGAAGTGCTAGATGTGCTTTACACTGG ATCCCTTACTTTAAGGTCACAGAATCCTAGTGACCAACAACGGAAGAAAAATGACCAGGAACGTGTTTTGAAGTTTATGACAGATCACCAACCACATGTT GTTGTTTTAGGTGCAGTAAATTTGTCTTGCACTCGTTTAAAGGAAGATCTATATGAGGTCATTTTTAAGATGGTAGAGGAAAACCCTAGGGATGTTGGGC ATGAAATGGACGGGCTCAGCGTTGTGTATGGAGATGAATCTCTTCCCCGTCTTTATGAAAATTCTCGAATTTCCTCTGAACAACTTCCTTCCCAGCAAGG TATAGTCAGGCGGGCTGCTGCTCTTGGCCGATATCTCCAGAACCCACTGGCAATGGTTGCAACCTTATGTGGACCCAGAAGGGAAATATTATCATGGAAA CTGAACTCTTTGGAGAGCTTTCTCAACCCAGATGATAAATTTGGAATGGTTGAGCAGGTTATGGTAGATGTGACCAATCAGGTTGGTTTAGACATTAATT TAGCAATAAGTCACGAGTGGTTATTTTCTCCTTTACAATTTATTTCTGGGCTTGGTCCACGTAAGGCTGCATCCTTACAGAGATCCTTGGTAAGAGCTGG TGCAATTTTTACCAGGAAGGATTTTTTGAAAAAACATAAGCTGGAGAAAAAGGTTTTTGTCAATGCAGTTGGTTTCTTGCGTATCCGGCGAAGTGGGTTG GCTGCTAGCAGCAGTGAATATATTGATTTGCTGGATGATACAAGAATTCATCCAGAATCATATGTTATTGCACAAGAGTTGGCCAAAGATGTGTATGAGG AGGATGGCACAGGTGATGGAAATGATGATGATGATGCATTGGATTTGGCAATAGAGCATGTTAGAGAAAGACCTAGTTATTTGAAAAACCTTGATGTTGT GGAATATGCTACTGCGAAAGAAGAACAAAAAAAGAAACAACCGTCAATTGTTATTAATCTTCTGAAGAAAATAGAAACTTTGCATGACATTAAGAGTGAA TTGATTCAAGGTTTTCAGGATTGTCGTAAGCAATATGAAGAACCAAG
• Tissue: pods
• Gene name: LI_gene_194479;
• Additional information: details;

Expression of Ll_transcript_462826

FPKM

• PAB: 3.8
• PNAB: 13.5
• PS1: 22.7
• PS2: 13.3
• PS3: 17.9
• PW1: 14.4
• PW2: 15.4
• PW3: 14.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462826

• Blastp: Transcription elongation factor SPT6 homolog from Arabidopsis with 64.51% of identity
• Blastx: Transcription elongation factor SPT6 homolog from Arabidopsis with 65.4% of identity
• Eggnog: domain protein(COG2183)
• Kegg: Link to kegg annotations (AT1G65440)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458019.1)
• Pfam: Acidic N-terminal SPT6 (PF14632.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;