Ll_transcript_464356

• Id Trinity: TRINITY_DN52658_c2_g3_i23
• Name Transcript: Ll_transcript_464356
• Sequence: CGTGCTCTCACGAATGAGTATGACTATGACTACAGCGACGGTTACAGATCGCGTTTGAGTTTGTGGTTGTGGATTCCTTCAATTCATTTCAATGGCTTCT GCTTCGTCTTCTTCATCGAAGTTGTTGTGCTTCAATCCTCACTGCAATGAATTCAAATCCGAAAGACCTAACAAAGGTTGGAAACTCCGTAACGATGAAG GAGCTCAGCTTTGTGATCGATGCGGTTCTGCTTTTGAAGAAGGGAGATTCTGTGACATTTTTCACTCAAATGCTTCTGGTTGGAGGAATTGTGAGACTTG TAGGAAGGGGATTCATTGTGGATGTATTGTTTCAAGTCACGCCTTTGTGTTGTTGGATCCTGGAGGAATTGAATGTTTTGCATGTGCCCGCAAACATATT CTTTTGCCATCTAACCCTACGTGGTCACCACCTTTTTCCCTTCAAAATCGATTATCTGAGAGACTTAGAGACCTGTCTGCAAAAAGTTGGAGTCAATTAG CTGGATCTGGGCCTGTACCATGGAAGCAAGCACCCAGTCTGTTCAATTCAGTTTCATCATCCGACATGTGCCCAGATGTATCCCCTTTAGTTGGATTAAC AAATGGTGTTGATAAAATTTATGGCAATGAAAGGTTACTTGCCTCTTCCTTTGAGAAGAAAAATGAGGATTTGTCTGGAATATCAGTTAATTGGAGCGCT AATTTTGGTCCACGGGAAATGATGCTTATGAATGGAATGAAGAGTGAAGACAGATCAAGTTCATGTTTAAATATGTGTCAACAGTCTTCTTCTCTGAAGG ACGATTTGTCCTTTCAACCATTTGCTCTGTCTGCACCTTATGCAACTCCAAATGAAAGAAATGGTCAAGTTGGGGTAACTGGAAGTCATCCACAACAAAC TACATCTCTTCCAGGAAAGCAATTTAGTGACACTGTGCATTTAGCCCTGGATTCATCAGGTGAAGCTCAGGTTCGCAATGGACGACCTCGAGCAGATTCC CGAGGAAGAAACCAGTTACTGCCTCGGTACTGGCCAAGGTGTACTGATCTGGAGCTACAGAAAATAACCATAGACTCTACTTCTGTAATTACTCCCTTGT TTCAGAAGACCTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTTCCAAAAAAGTGTGCTGAGGCCTACTTCCCACCAATTTCCAACCCTGA AGGGTTGCCACTTAAAATCCTTGATGCTAAAGGAAAAGAATGGATATTTCAGTTTCGCTTCTGGCCCAACAATAACAGCAGAATGTATGTGTTAGAGGGT GTCACTCCCTGCATACAATCCATGCAGTTGCAAGCAGGTGATACAGTAACATTTAGCCGGCTGGAGCCAGAAGGGAGGTTGGTTATGGGATTTAGAAAGG CTTCAAGTGCTACACCCTCCGATCAGGACAATGAAACAAATAAGACTGGAAACGGATTTTCTGCACAGGATGAGGTCGAGCTGGCTGATGCTAGTTCATG GTCTAAAATTGATAAGTCAGGATACATAACAAAAGATGCACTGGGGGGCAAATCTTCAGTGAGAAAGAGAAAAAACAGCATCTTGGGTTCAAAGAGTAAA CGCCTAAGGATTGAAAACGAGGATCTAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAGGCCTGCTCCGTCCCCCTCCTAGCCACGTTGCCAGCATTG TGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCAGTACTCGGGAAGCCAACAATTTTCACCACTGATAATATGGGATCATCTTGCTCAGC TGCACAAGAGATGACAGCAGAACAGCTTGAGAATTTGCTACCCGCCTGTAATTCAGCTGTATCCAAGAAAATGAAGGCAGCCAAGCGGGATCCTGATAAT GCTGAAGCCTTGGAGGGACTTGACACACTTGCAAATCTAGCCATCCTTGGGGAGTGTGAGGCACACCCAGCATCTTCCCAGGCCACAACGAAACACCCAC GGCATAGACCTGGCTGCTCTTGCATTGTTTGCATCCAACCTCCCAGTGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTATGCTTAACAGT GAAGCGTCGTTTCCATACCCTAATGTTACGCCGTGAGAAGAAACAAACAGACAGAGAAGCAGAGACAACACGTAAAAAACAGCAGCAACAGCATCCTCAG CCATTACCTTCATCTGAAACTTGGCTTGACGATGATTCCTTGCCTTTTAGCAACACAGGGGATAGCAGCAGCCCAAACCAGAACAAGGAGGGCAATGATG GTTCTGATGATGATCCTATGCAGATAATATCATCTGCTTCACCATTCAAAGGCCAAATTGATTTAAACATCCAACCAGAGCGAGAAGAAGAGTTTTCACC TCATTCAGATTCTGGTGGTATAATGAAGTTGCTCCATGATACCACTAATATGCATCTCAAGCAGCAGAATATGTTGAACTCTAGTACTGGAGACACACCA GGAAGTCAGTCACAGCAGGTTGGAGATGGAGTGAGGGATGAAAAACTTAGAAATGGTGTATCCCATGGCAGCAATATTCATAATAATGCTGATAAGGAAC ATGCCCAAGCTTTGCCTATGAATGTGTGAAAATCATATTTGAAGCTATAGCCTTAGTTATAGCACATTCTTGCAAAGCTATATTAGAGTGTGGGAAGTAC CTTTGCTGGACATTGATCTTGCCTTTTCAGATTTGTATATAAAGAGGAGTAGGAAAAAAGGCAATTCATGAAAAACCAATATATTATGGTAACATTAGTG GACAAGATAGTGATTTGTGTAGGGAAAATTATGAAATGCAGTTGAATGGGGTGAAAGGTTGAAGCTATTTAGTTTCTATTGAGAGCTCACCTTTTCACCT GATTACAACCACATTGAAAATGTAGCTAGTCCTTATTATTTCTCTCATCTTCTTCTTAGCCTGTAAACTAAGTTATTGTAAATTGGGCCACCCTTTTTAC ATAGAATTGCTCAAACCTAATCCAAATTTACTAAACTAAACAGTTATAATTATTAAATCATGTCAAACTCTTAGCAATATCTCCAAGTAAGGTCTCAGGT TTGAGTCTTGTGAATGAAAAAATATCTACAAAAAAAAGTTAGTCTCATGTATAACAAAAAAAATATGTTACC
• Tissue: pods
• Gene name: LI_gene_194487;
• Additional information: details;

Expression of Ll_transcript_464356

FPKM

• PAB: 1.4
• PNAB: 1.9
• PS1: 2.8
• PS2: 2.8
• PS3: 2.7
• PW1: 1.8
• PW2: 2.3
• PW3: 2.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_464356

• Blastp: B3 domain-containing protein Os07g0563300 from Oryza sativa with 44.74% of identity
• Blastx: B3 domain-containing protein Os07g0563300 from Oryza sativa with 44.43% of identity
• Eggnog: B3 domain-containing protein(ENOG410Z235)
• Kegg: Link to kegg annotations (4343608)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418889.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;