Ll_transcript_464361

• Id Trinity: TRINITY_DN52658_c2_g3_i27
• Name Transcript: Ll_transcript_464361
• Sequence: GGTTTAATTAGGTTCAGTAACAAAGGTTGATTGGTTATGTGGAAAGAATAATTTTTGGTGGGTTATGTTTAATAATGAATTTCTTGACCAAGGATCTATC TGCCCGTATGTAAATAACTATGCCAATAATGAATGTAAACTTTGGTTGTTTCTATGATACTTAGTTCTGCTTTTGAAGAAGGGAGATTCTGTGACATTTT TCACTCAAATGCTTCTGGTTGGAGGAATTGTGAGACTTGTAGGAAGGGGATTCATTGTGGATGTATTGTTTCAAGTCACGCCTTTGTGTTGTTGGATCCT GGAGGAATTGAATGTTTTGCATGTGCCCGCAAACATATTCTTTTGCCATCTAACCCTACGTGGTCACCACCTTTTTCCCTTCAAAATCGATTATCTGAGA GACTTAGAGACCTGTCTGCAAAAAGTTGGAGTCAATTAGCTGGATCTGGGCCTGTACCATGGAAGCAAGCACCCAGTCTGTTCAATTCAGTTTCATCATC CGACATGTGCCCAGATGTATCCCCTTTAGTTGGATTAACAAATGGTGTTGATAAAATTTATGGCAATGAAAGGTTACTTGCCTCTTCCTTTGAGAAGAAA AATGAGGATTTGTCTGGAATATCAGTTAATTGGAGCGCTAATTTTGGTCCACGGGAAATGATGCTTATGAATGGAATGAAGAGTGAAGACAGATCAAGTT CATGTTTAAATATGTGTCAACAGTCTTCTTCTCTGAAGGACGATTTGTCCTTTCAACCATTTGCTCTGTCTGCACCTTATGCAACTCCAAATGAAAGAAA TGGTCAAGTTGGGGTAACTGGAAGTCATCCACAACAAACTACATCTCTTCCAGGAAAGCAATTTAGTGACACTGTGCATTTAGCCCTGGATTCATCAGGT GAAGCTCAGGTTCGCAATGGACGACCTCGAGCAGATTCCCGAGGAAGAAACCAGTTACTGCCTCGGTACTGGCCAAGGTGTACTGATCTGGAGCTACAGA AAATAACCATAGACTCTACTTCTGTAATTACTCCCTTGTTTCAGAAGACCTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTTCCAAAAAA GTGTGCTGAGGCCTACTTCCCACCAATTTCCAACCCTGAAGGGTTGCCACTTAAAATCCTTGATGCTAAAGGAAAAGAATGGATATTTCAGTTTCGCTTC TGGCCCAACAATAACAGCAGAATGTATGTGTTAGAGGGTGTCACTCCCTGCATACAATCCATGCAGTTGCAAGCAGGTGATACAGTAACATTTAGCCGGC TGGAGCCAGAAGGGAGGTTGGTTATGGGATTTAGAAAGGCTTCAAGTGCTACACCCTCCGATCAGGACAATGAAACAAATAAGACTGGAAACGGATTTTC TGCACAGGATGAGGTCGAGCTGGCTGATGCTAGTTCATGGTCTAAAATTGATAAGTCAGGATACATAACAAAAGATGCACTGGGGGGCAAATCTTCAGTG AGAAAGAGAAAAAACAGCATCTTGGGTTCAAAGAGTAAACGCCTAAGGATTGAAAACGAGGATCTAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAG GCCTGCTCCGTCCCCCTCCTAGCCATGCTGCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATACGAGGATGCTCCAGTGCTTGGGAAGCCAAC AATTTTCACCACTGGTAATATGGGTGAAAAGGTCCAGTGGGCTCAATGTGAAAATTGTCTTAAGTGGCGCAAATTGCCAGCAAGTGCGCTTCTTCCATCA AAATGGATGTGTTCCAATAACTCTTGGGACCCAGAAAGATCATCTTGCTCAGCTGCACAAGAGATGACAGCAGAACAGCTTGAGAATTTGCTACCCGCCT GTAATTCAGCTGTATCCAAGAAAATGAAGGCAGCCAAGCGGGATCCTGATAATGCTGAAGCCTTGGAGGGACTTGACACACTTGCAAATCTAGCCATCCT TGGGGAGTGTGAGGCACACCCAGCATCTTCCCAGGCCACAACGAAACACCCACGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATCCAACCTCCCAGT GGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTATGCTTAACAGTGAAGCGTCGTTTCCATACCCTAATGTTACGCCGTGAGAAGAAACAAA CAGACAGAGAAGCAGAGACAACACGTAAAAAACAGCAGCAACAGCATCCTCAGCCATTACCTTCATCTGAAACTTGGCTTGACGATGATTCCTTGCCTTT TAGCAACACAGGGGATAGCAGCAGCCCAAACCAGAACAAGGAGGGCAATGATGGTTCTGATGATGATCCTATGCAGATAATATCATCTGCTTCACCATTC AAAGGCCAAATTGATTTAAACATCCAACCAGAGCGAGAAGAAGAGTTTTCACCTCATTCAGATTCTGGTGGTATAATGAAGTTGCTCCATGATACCACTA ATATGCATCTCAAGCAGCAGAATATGTTGAACTCTAGTACTGGAGACACACCAGGAAGTCAGTCACAGCAGGTTGGAGATGGAGTGAGGGATGAAAAACT TAGAAATGGTGTATCCCATGGCAGCAATATTCATAATAATGCTGATAAGGAACATGCCCAAGCTTTGCCTATGAATGTGTGAAAATCATATTTGAAGCTA TAGCCTTAGTTATAGCACATTCTTGCAAAGCTATATTAGAGTGTGGGAAGTACCTTTGCTGGACATTGATCTTGCCTTTTCAGATTTGTATATAAAGAGG AGTAGGAAAAAAGGCAATTCATGAAAAACCAATATATTATGGTAACATTAGTGGACAAGATAGTGATTTGTGTAGGGAAAATTATGAAATGCAGTTGAAT GGGGTGAAAGGTTGAAGCTATTTAGTTTCTATTGAGAGCTCACCTTTTCACCTGATTACAACCACATTGAAAATGTAGCTAGTCCTTATTATTTCTCTCA TCTTCTTCTTAGCCTGTAAACTAAGTTATTGTAAATTGGGCCACCCTTTTTACATAGAATTGCTCAAACCTAATCCAAATTTACTAAACTAAACAGTTAT AATTATTAAATCATGTCAAACTCTTAGCAATATCTCCAAGTAAGGTCTCAGGTTTGAGTCTTGTGAATGAAAAAATATCTACAAAAAAAAGTTAGTCTCA TGTATAACAAAAAAAATATGTTACC
• Tissue: pods
• Gene name: LI_gene_194487;
• Additional information: details;

Expression of Ll_transcript_464361

FPKM

• PAB: 2.4
• PNAB: 2
• PS1: 3.7
• PS2: 1.2
• PS3: 3
• PW1: 1.6
• PW2: 1.2
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_464361

• Blastp: B3 domain-containing protein Os07g0563300 from Oryza sativa with 47.79% of identity
• Blastx: B3 domain-containing protein Os07g0563300 from Oryza sativa with 47.45% of identity
• Eggnog: B3 domain-containing protein(ENOG410Z235)
• Kegg: Link to kegg annotations (4343608)
• CantataDB: Link to cantataDB annotations (CNT0000445)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425639.1)
• Pfam: B3 DNA binding domain (PF02362.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;