Id Trinity | TRINITY_DN52658_c2_g3_i5 |
---|---|
Name Transcript | Ll_transcript_464337 |
Sequence | CGTGCTCTCACGAATGAGTATGACTATGACTACAGCGACGGTTACAGATCGCGTTTGAGTTTGTGGTTGTGGATTCCTTCAATTCATTTCAATGGCTTCT GCTTCGTCTTCTTCATCGAAGTTGTTGTGCTTCAATCCTCACTGCAATGAATTCAAATCCGAAAGACCTAACAAAGGTTGGAAACTCCGTAACGATGAAG GAGCTCAGCTTTGTGATCGATGCGGTTCTGCTTTTGAAGAAGGGAGATTCTGTGACATTTTTCACTCAAATGCTTCTGGTTGGAGGAATTGTGAGACTTG TAGGAAGGGGATTCATTGTGGATGTATTGTTTCAAGTCATGCCTTCGTCTTGTTGGATCATGGGGGAATTGAGTGCTTTGCCTGTGCCCGCAATCATATT CTTTTGCAGTCTAACCCAAAGTGGCCATCATCTTTTTCCCTTCAAAATCGTTTATCTGAGAGACTTAGAGACCTGCCTACACAAAATTGGAGTCAATTAG CTGGATCAGGGCATATATCATGGAAGCAAGCACCCAATCTGTTCAGTTCTGTTTCTTCATCCGACCTGCATCCAGATGTGTCCCCTCATGAAAGGTTACC TGCCTCTTCTTTGGAGAATAAAAATGAGGATTTGTGTGGAATATCAGTTAATTGGAGCACTAATTTTGGTCCACAGGAAATGAAGCTTATGAATGGATTT AGGAATGGAGACAAATCAAGTTCATGTTTAAATATTTGGCAACGGCCTCTTTTTCTGAAGGAAGATTCGTCCCCGCAACCATTTGCTCTGTCTGTACCTT ACGCGACTCCAAGTGAAAGAAATGGTCAAATTGCGGTAGGTGGAAGTCATCCACAACAAACTACATCTCTTCCAGGAAAGCAATTTAGTGACACTCTGCA TTTAGCACTGGAATCCTCACCTGAAGCTCAGGTTCATAGTGGACGACCCCAAGCAGATGCCAGAGGAAGAAACCAGTTACTGCCACAGTATTGGCCTAGG TGTACTGATCTGGAGCTACAGCAAATCACCGTAGATTCTACTTCTGTAATTACTCCCTTGTTTCAAAAGACCTTGAGTGCTAGTGATGCTGGGCGAATTG GGCGTTTAGTGCTTCCAAAAAAGTGTGCTGAGGCCTACTTCCCATCTATTTCCCAGCCTGAAGGGTTGCCACTTAAAGTCCTCGATGCCAAAGGAAAAGA GTGGAAATTTCAGTTTCGCTTCTGGCCCAACAATAACAGCAGAATGTATGTGTTAGAGGGTGTCACTCCCTGCATACAATCCATGCAGTTGCAAGCAGGT GATACAGTAACATTTAGCCGGCTGGAGCCAGAAGGGAGGTTGGTTATGGGATTTAGAAAGGCTTCAAGTGCTACACCCTCCGATCAGGACAATGAAACAA ATAAGACTGGAAACGGATTTTCTGCACAGGATGAGGTCGAGCTGGCTGATGCTAGTTCATGGTCTAAAATTGATAAGTCAGGATACATAACAAAAGATGC ACTGGGGGGCAAATCTTCAGTGAGAAAGAGAAAAAACAGCATCTTGGGTTCAAAGAGTAAACGCCTAAGGATTGAAAACGAGGATCTAATAGAGCTGAAG ATTACATGGCAAGAAGCTCAAGGCCTGCTCCGTCCCCCTCCTAGCCATGCTGCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATACGAGGATG CTCCAGTGCTTGGGAAGCCAACAATTTTCACCACTGGTAATATGGGTGAAAAGGTCCAGTGGGCTCAATGTGAAAATTGTCTTAAGTGGCGCAAATTGCC AGCAAGTGCGCTTCTTCCATCAAAATGGATGTGTTCTGATAATTTGTGGGATCCAGAAAGATCTTCTTGCTCAGCTGCACAAGAGCAGACAGCAGAACAG CTTGAGAATTTGCTACCCCCTTGTAATTCAGCTGTTTCCAAGAAAATGAAGGCAGACAAGCAGGATCCTGATAATGCTGAAGCTTTGGAGGGACTTGACA CACTTGCAAATCTGGCTATCACGGGAGAGGGTGAGGCATTTTCAGCATCTTCTCAGGCCACAACTAAACACCCACGGCATAGACCGGGCTGCTCTTGCAT TGTTTGCATCCAACCTCCCAGTGGAAAGGGCCCCAAGCATAAGCAGACATGCACATGTAATGTATGCTTAACAGTGAAGCGCCGTTTCCGTACCCTAATG TTACGCCGTGAGAAGAAACAATCGGAAAAAGAAGCAGAGACAACGCATAAAAAGCAGAAGCACAAGCATCCTCAGCCATTACCTCCATCTGAAATTTTGC TTGATGATGATTCCTTGCCTTGTAGTAACACAGGTGATAGCAGCAGCCCAAACCAGAACAAAGAGGGCAATGACGGTTCTGATGATGATCCTATCCAGAT AAAATCGTCTGCTTCACCATTCAAAGGCCAAATTGACCTCAACATCCGGCCAGAGAGGGAAGAAGAGTTTTCACCTCGTTCAGATTCCAGTGGTATGATG AAGTTGCCCCATGATACTACTGATATGTATCTCAAACAGCAGACGACTATGTTGAACTCTAGTATGGGAGACGCATCAGGAAGTCAGTCACAGAAGGTTG GAGATGGAGTGAGGGATGAGAAACTTAGCAATGGTGTATCCCATGGCAATAGTAGTGATAATAATGGTGATAAGGAACATGCCCAAGCTTTGCCTATGAA TGTGTGAAAATCATATTTGAAGCTATAGCTTTAATTATAACTCATTCTTGCAAGCTATATTGGACTGGAGAAAGTATTTTTATTGTACATTAATTCTTGC CTTTTCAGATTTGTATATAAAGAGGGGTAGTAAAGAAGGCAATTCATGAAAAGACCAATATATTGTGGCAATATCAGTGAACATGATAGTGGTTTGTGTA GGAAAAATTATGAAATGCAGTTGAGGATAGTGCTATTAGTACTCCAAAGTGTCTATTGATATTTTCCATTCACCAATCAAAATTGTAGTTTTTTATTTTG CATGTTTCTTTTAAGTGGAAGCACAATTTTGCATGTTTCCAGCAGACAACCTTTGATATGCAAACAATGATGGATATAATGTTTTTTTTGTTTGTTTTTT GGGTTGGATAGCACGAG BLAST |
Tissue | pods |
Gene name | LI_gene_194487; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_464337
Blastp | B3 domain-containing protein Os07g0563300 from Oryza sativa with 46.73% of identity |
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Blastx | B3 domain-containing protein Os07g0563300 from Oryza sativa with 46.44% of identity |
Eggnog | B3 domain-containing protein(ENOG410Z235) |
Kegg | Link to kegg annotations (4343608) |
CantataDB | Link to cantataDB annotations (CNT0000445) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440292.1) |
Pfam | B3 DNA binding domain (PF02362.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |