Ll_transcript_462856

• Id Trinity: TRINITY_DN52659_c0_g1_i24
• Name Transcript: Ll_transcript_462856
• Sequence: AAAATATTAAAAAAGGTAACGCATATCTTCGAGTTTCTTTCACCTAATAAACTAAACTTGTTGAAGCCTCTCTTCTTCATCTTTCATTATTTTTCTTCTT CATCTAACCCTAACGAGGACGGTTGCGCTTTTCTTATAAGCTTTTTTCTTCTTCACTTCTTATAAAGTTTTCGCCTTTCGCTTTCTCTCTCATTCTGCAT TTCTCGCGTTTTTTCAACGATCCAATTTTGATCGCTCTTTTGTTCGTTTTGTCCTCAATCGCTTCTCGATCTTTCTATTTTTCAAGCTCACGCCATCGAT CTAGGTTGTTTGCTGTTTCTAGGGTGACTAAGGTGGCTATAATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTT GGAGATCTTCAGCCTGGCCCGCTAACTGTTGATCAAGGAGAGAATTGGGTGCAACCTCCTTCTCAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAG GAAGAGGTGCTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACAAGGCGAACAGCAGCTGGTAGAGGCCGTGGAGCAAGAGTGATCAA TCTCGATCCTGAACCTTGTGACGTCCTTCCAGAACCTGTTGCTTTAGGGGCTCCGGAACCCATTTACAATAACGTAGAGGTAGTGGCCAATAATAATATT GTGATGGAGGGTGGAAGTGGAGACAAGGCGGTGGCAGCTGAAGAGGAAGCAAGCACCACACCTGTCCCTGAGAGGGTATTCCCGTATTGCTTGTTACCTC TACTGGATTGCATTACTGCCTTTCCAAAATATTGCTGCAATTTAGTTTTTATGATGTGAAGGAGCTATGTTTGGTAACTATGTTATTGGCTGCTAGTACT TTTTTAATGTTTTATTTTGCTGCATATGATAGTCATATTTAATGGATTTAGTCCCCTCTTTGCTGTTCCTGTTTTAATGTGTTGAATTGACTTAGATGGT TTTGGATATTTTGGTTTTCCATAATAAACATGATATTTATCATGTCTTGGCTCATTAGTTAATATATAATTTGGACCTTAATGTAGTTGCTCTCTGGTTG ATTCAGGTGCAAGTTGGTGGCTCACCTGTATATAAGATTGAAAGGAAATTGGGCAAGGGTGGCTTCGGCCAAGTTTATGTTGGCAGAAGGATTAGCGGGG GCTCTGATCGAACAGGCCCTGATGCAATTGAGGTTGCACTCAAGTTTGAGCACAGAAACAGTAAAGGATGCAATTATGGCCCTCCTTATGAGTGGCAAGT GTACAATACTCTGAATGGCTGCTATGGAATTCCCGGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTCTGGTCATGGACATCCTTGGGCCCAGT CTCTGGGATGTATGGAATTCTCTTGGCCAATCGATGTCTCCAAATATGGCTGCTTGCATTGCAGTGGAGGCAATATCAATCCTTGAGAAGCTCCATTTGA AAGGGTTTGTGCATGGAGATGTCAAACCAGAAAACTTTTTACTTGGTCAACCTGGAACAGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTGGC TTCCAGATGGAAGGATGCGTCATCTGGTCTACATGTTGATTATGATCAGAGACCTGATATATTCAGAGGAACAATAAGATATGCCAGTGTACATGCTCAT TTAGGTAGGACTGGAAGTCGAAGGGATGATTTTGAGTCACTGGCATACACTCTAATATTTCTAATAAAAGGGAGGTTGCCATGGCAGGGTTATCAGGGTG ACAATAAAAGTTTCCTTGTTTGTAAGAAAAAGATGGGCACTACCCCGGAGTTGATGTGTTCCTTTTGTCCTGCTCCATTTAAGCAGTTCCTTGAAGCTGT TACCAACATGAGATTTGATGAGGAGCCAAATTATCACAAGCTTATATCACTTTTTGATAGCTTGATTGAACCATGCACTCGATTGAGACCTATTCGAATT GATGGAGCGTTAAAGGTTGGTCAAAAGCGGGGAAGGATGCTTATTAATCTGGAAGAAGATGAGCAACCTAAGAAGAAAGTTCGATTAGGGAGTCCTGCTA CTCAGTGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTACAATGTATCAGACACCAGGCTCCGGCAGCATGTAGACAAGGGTAT TGAGGATGGGTTGTATATAAGCTGTGTTGCTTCTTCAGCAAACCTGTGGGCTTTAATCATGGATGCAGGAACCGGTTTTTCTTCCCAGGTTTATGAGTTA TCAGCAGCCTTCCTGCATAAGGATTGGATTATGGAGCAGTGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGAAGTTCCTTGGTTG TCATGTCCAAAGGAACTCCTTACACACAGCAATCTTACAAAGTCAGTGAATCATTTCCTTTCAAATGGATAAACAAGAAATGGAAAGAAGGATTCCATGT TACATCCATGACTACTGCTGGCAGTCGATGGGGTGTTGTTATGTCTAGAAATGCTGGGTATTCTGATCAGGTTGTGGAGTTAGACTTTTTGTATCCAAGT GAAGGAATCCATCGACGATGGGAGAGTGGTTACCGGATTACATCTATGGCTGCTACTAGTGATCAGGCAGCCTTCATACTGAGCATCCCGAAGCGTAAAT TACTTGATGAAACTCAAGAGACTCTGCGCACATCTGCCTTCCCCAGCACTCATGTAAAGGAAAAATGGTCGAAGAATCTATATATTGCATCAATATGTTA TGGGCGAACTGTTTGTTAGCTTCTGCCATGCACATTTGCAACATTCTTTACTAAGTCAAAATTAGAAATGAGAGGGTTTTATATGATCATTTAGTTGAGT GGGTAGGTTTGCTTTTGACCCAAACCTACTTAACAGTAAAATCCCTAAAAAAATTGGTTGTAATTAGAAGGAAAGAAATTAAAAAGTAAAGGAGAAATAG AAGTAAGCTATGTTGTGAGAGGCATTTTCCTCAACCAACCTGAGCCAATGGCAACAACAATTTGTTCAAGAGTACTATCAATATGAATGGAAAGTCTCTG GCTATTTTGGCCATGTTTCATGGTTGTGCTTTTAAACCATTTGCGATGTTGTATGTAATAATGAAATTTAAGGTACAATGATTTCTATATTCCAAGACCA ATTCATACCGGTCCTGAACTATGGCTGTCAATAAGATTTATGCGACATAATAATCAATTGGGG
• Tissue: pods
• Gene name: LI_gene_194492;
• Additional information: details;

Expression of Ll_transcript_462856

FPKM

• PAB: 2
• PNAB: 1.3
• PS1: 0.8
• PS2: 0.4
• PS3: 0.6
• PW1: 1.7
• PW2: 1.5
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462856

• Blastp: Casein kinase 1-like protein HD16 from Oryza sativa with 87.5% of identity
• Blastx: Casein kinase 1-like protein HD16 from Oryza sativa with 86.89% of identity
• Eggnog: Casein Kinase(ENOG410XPGP)
• Kegg: Link to kegg annotations (4334396)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434417.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;