Ll_transcript_462857

• Id Trinity: TRINITY_DN52659_c0_g1_i25
• Name Transcript: Ll_transcript_462857
• Sequence: AAAATATTAAAAAAGGTAACGCATATCTTCGAGTTTCTTTCACCTAATAAACTAAACTTGTTGAAGCCTCTCTTCTTCATCTTTCATTATTTTTCTTCTT CATCTAACCCTAACGAGGACGGTTGCGCTTTTCTTATAAGCTTTTTTCTTCTTCACTTCTTATAAAGTTTTCGCCTTTCGCTTTCTCTCTCATTCTGCAT TTCTCGCGTTTTTTCAACGATCCAATTTTGATCGCTCTTTTGTTCGTTTTGTCCTCAATCGCTTCTCGATCTTTCTATTTTTCAAGCTCACGCCATCGAT CTAGGTTGTTTGCTGTTTCTAGGGTGACTAAGGTGGCTATAATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCTAGAAGGTCGAAACGGCTT GGAGATCTTCAGCCTGGCCCGCTAACTGTTGATCAAGGAGAGAATTGGGTGCAACCTCCTTCTCAGAACAGAACTAGGAGGAGAGTTGGAGGTGGAAGAG GAAGAGGTGCTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACAAGGCGAACAGCAGCTGGTAGAGGCCGTGGAGCAAGAGTGATCAA TCTCGATCCTGAACCTTGTGACGTCCTTCCAGAACCTGTTGCTTTAGGGGCTCCGGAACCCATTTACAATAACGTAGAGGTAGTGGCCAATAATAATATT GTGATGGAGGGTGGAAGTGGAGACAAGGCGGTGGCAGCTGAAGAGGAAGCAAGCACCACACCTGTCCCTGAGAGGGTGCAAGTTGGTGGCTCACCTGTAT ATAAGATTGAAAGGAAATTGGGTAAGGGTGGCTTTGGCCAAGTTTATGTTGGCAAAAGGATTAGTGGGGGCTCTGATCGAACAGGCCCTGATGCGATTGA GGTTGCACTCAAGTTTGAGCACAGAAACAGTAAAGGTTGCAATTATGGACCTCCATATGAGTGGCAAGTGTACACCACTCTGAACGGTTGCTATGGAATT CCCTGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTCTGGTCATGGACATCCTTGGGCCCAGTCTCTGGGATGTATGGAATTCTCTTGGCCAAT CGATGTCTCCAAATATGGCTGCTTGCATTGCAGTGGAGGCAATATCAATCCTTGAGAAGCTCCATTTGAAAGGGTTTGTGCATGGAGATGTCAAACCAGA AAACTTTTTACTTGGTCAACCTGGAACAGCTGATGATAAGAAGTTATATCTTATTGATCTTGGTTTGGCTTCCAGATGGAAGGATGCGTCATCTGGTCTA CATGTTGATTATGATCAGAGACCTGATATATTCAGAGGAACAATAAGATATGCCAGTGTACATGCTCATTTAGGTAGGACTGGAAGTCGAAGGGATGATT TTGAGTCACTGGCATACACTCTAATATTTCTAATAAAAGGGAGGTTGCCATGGCAGGGTTATCAGGGTGACAATAAAAGTTTCCTTGTTTGTAAGAAAAA GATGGGCACTACCCCGGAGTTGATGTGTTCCTTTTGTCCTGCTCCATTTAAGCAGTTCCTTGAAGCTGTTACCAACATGAGATTTGATGAGGAGCCAAAT TATCACAAGCTTATATCACTTTTTGATAGCTTGATTGAACCATGCACTCGATTGAGACCTATTCGAATTGATGGAGCGTTAAAGGTTGGTCAAAAGCGGG GAAGGATGCTTATTAATCTGGAAGAAGATGAGCAACCTAAGAAGAAAGTTCGATTAGGGAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCG TCCCATGAAGCAGAGATATCACTACAATGTATCAGACACCAGGCTCCGGCAGCATGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTTGCT TCTTCAGCAAACCTGTGGGCTTTAATCATGGATGCAGGAACCGGTTTTTCTTCCCAGGTTTATGAGTTATCAGCAGCCTTCCTGCATAAGGATTGGATTA TGGAGCAGTGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTTAATGGGAGTTCCTTGGTTGTCATGTCGAAAGGAACTCCTTACACACAGCA ATCCTACAAAGTTAGTGAATCATTTCCTTTCAAATGGATAAACAAGAAGTGGAAAGAAGGATTCCATGTCACCTCCATGACCACTGCTGGCATTCGATGG GGTGTTGTTATGTCCAGAAATGCTGGGTATTCTGATCAGGTTGTGGAACTAGACTTTCTATATCCAAGTGAAGGAATCCATCGACGATGGGAGAGTGGTT ACCGGATTACATCTATGGCTGCTACTACTGATCAGGCAGCCTTCATACTGAGCATCCCGAAACGTAAATTACTTGATGAAACTCAAGAGACTCTGAGGAC ATCTGCCTTCCCTAGCACCCATGTAAAGGAAAAATGGTCCAAGAATCTATATATTGCTTCAATATGTTATGGGCGAACTGTTTGCTAGCTTCTGTCATGA ACATTTGCCACATTCTTGAAGAATGGGGCAAAATTAGAAATATGAGATGGTTTCTATGATCATTAAGTTGGAAAGGGTAGGGTTTTCGCTTTTGTCCCCA GACCAGTTACTTAAGCGAAAAATCCCTCAAAAAATTTGGTTGTAATTAGAAAAGGAAGAAAAACAGAAGCAGCTATTATGCTGTGAGAGGAATGTTCCCC AATCAACTTGAGTCAATGGGAGCAATGATTTGTTCAAAGTATTAACATGGAATGTAAGGGGTGGCTATTTTGGCCATGTTTCAT
• Tissue: pods
• Gene name: LI_gene_194492;
• Additional information: details;

Expression of Ll_transcript_462857

FPKM

• PAB: 12.8
• PNAB: 4
• PS1: 8.8
• PS2: 3.3
• PS3: 7.1
• PW1: 5.5
• PW2: 1.6
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462857

• Blastp: Casein kinase 1-like protein HD16 from Oryza sativa with 77.22% of identity
• Blastx: Casein kinase 1-like protein HD16 from Oryza sativa with 82.88% of identity
• Eggnog: Casein Kinase(ENOG410XPGP)
• Kegg: Link to kegg annotations (4334396)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434417.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;