| Id Trinity | TRINITY_DN52659_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_462838 |
| Sequence | AAAATATTAAAAAAGGTAACGCATATCTTCGAGTTTCTTTCACCTAATAAACTAAACTTGTTGAAGCCTCTCTTCTTCATCTTTCATTATTTTTCTTCTT CATCTAACCCTAACGAGGACGGTTGCGCTTTTCTTATAAGCTTTTTTCTTCTTCACTTCTTATAAAGTTTTCGCCTTTCGCTTTCTCTCTCATTCTGCAT TTCTCGCGTTTTTTCAACGATCCAATTTTGATCGCTCTTTTGTTCGTTTTGTCCTCAATCGCTTCTCGATCTTTCTATTTTTCAAGCTCACGCCATCGAT CTGTGAGTTTCTATTTTTGCGAGGTTGTTTGCTGTTTCTAGGGTGACTAAGGTGGCTATAATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGC TAGAAGGTCGAAACGGCTTGGAGATCTTCAGCCTGGCCCGCTAACTGTTGATCAAGGAGAGAATTGGGTGCAACCTCCTTCTCAGAACAGAACTAGGAGG AGAGTTGGAGGTGGAAGAGGAAGAGGTGCTAATGCCACAGCTGTAGGCAAAGGGCCTTCACCAGCTGTACCCACAAGGCGAACAGCAGCTGGTAGAGGCC GTGGAGCAAGAGTGATCAATCTCGATCCTGAACCTTGTGACGTCCTTCCAGAACCTGTTGCTTTAGGGGCTCCGGAACCCATTTACAATAACGTAGAGGT AGTGGCCAATAATAATATTGTGATGGAGGGTGGAAGTGGAGACAAGGCGGTGGCAGCTGAAGAGGAAGCAAGCACCACACCTGTCCCTGAGAGGGTATTC CCGTATTGCTTGTTACCTCTACTGGATTGCATTACTGCCTTTCCAAAATATTGCTGCAATTTAGTTTTTATGATGTGAAGGAGCTATGTTTGGTAACTAT GTTATTGGCTGCTAGTACTTTTTTAATGTTTTATTTTGCTGCATATGATAGTCATATTTAATGGATTTAGTCCCCTCTTTGCTGTTCCTGTTTTAATGTG TTGAATTGACTTAGATGGTTTTGGATATTTTGGTTTTCCATAATAAACATGATATTTATCATGTCTTGGCTCATTAGTTAATATATAATTTGGACCTTAA TGTAGTTGCTCTCTGGTTGATTCAGGTGCAAGTTGGTGGCTCACCTGTATATAAGATTGAAAGGAAATTGGGCAAGGGTGGCTTCGGCCAAGTTTATGTT GGCAGAAGGATTAGCGGGGGCTCTGATCGAACAGGCCCTGATGCAATTGAGGTTGCACTCAAGTTTGAGCACAGAAACAGTAAAGGATGCAATTATGGCC CTCCTTATGAGTGGCAAGTGTACAATACTCTGAATGGCTGCTATGGAATTCCCGGGGTTCATTACAAGGGTCGACAAGGAGATTTCTACATTCTGGTCAT GGACATCCTTGGGCCCAGTCTCTGGGATGTATGGAATTCTCTTGGCCAATCGATGTCTCCAAATATGGCTGCTTGCATTGCAGTGGAGGCAATATCAATC CTTGAGAAGCTCCATTTGAAAGGGTTTGTGCATGGAGATGTCAAACCAGAAAACTTTTTACTTGGTCAACCTGGAACAGCTGATGATAAGAAGTTATATC TTATTGATCTTGGTTTGGCTTCCAGATGGAAGGATGCGTCATCTGGTCTACATGTTGATTATGATCAGAGACCTGATATATTCAGAGGAACAATAAGATA TGCCAGTGTACATGCTCATTTAGGTAGGACTGGAAGTCGAAGGGATGATTTTGAGTCACTGGCATACACTCTAATATTTCTAATAAAAGGGAGGTTGCCA TGGCAGGGTTATCAGGGTGACAATAAAAGTTTCCTTGTTTGTAAGAAAAAGATGGGCACTACCCCGGAGTTGATGTGTTCCTTTTGTCCTGCTCCATTTA AGCAGTTCCTTGAAGCTGTTACCAACATGAGATTTGATGAGGAGCCAAATTATCACAAGCTTATATCACTTTTTGATAGCTTGATTGAACCATGCACTCG ATTGAGACCTATTCGAATTGATGGAGCGTTAAAGGTTGGTCAAAAGCGGGGAAGGATGCTTATTAATCTGGAAGAAGATGAGCAACCTAAGAAGAAAGTT CGATTAGGGAGTCCTGCTACTCAGTGGATATCAGTGTATAATGCACGCCGTCCCATGAAGCAGAGATATCACTACAATGTATCAGACACCAGGCTCCGGC AGCATGTAGACAAGGGTATTGAGGATGGGTTGTATATAAGCTGTGTTGCTTCTTCAGCAAACCTGTGGGCTTTAATCATGGATGCAGGAACCGGTTTTTC TTCCCAGGTTTATGAGTTATCAGCAGCCTTCCTGCATAAGGATTGGATTATGGAGCAGTGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAGTT AATGGGAGTTCCTTGGTTGTCATGTCGAAAGGAACTCCTTACACACAGCAATCCTACAAAGTTAGTGAATCATTTCCTTTCAAATGGATAAACAAGAAGT GGAAAGAAGGATTCCATGTCACCTCCATGACCACTGCTGGCATTCGATGGGGTGTTGTTATGTCCAGAAATGCTGGGTATTCTGATCAGGTTGTGGAACT AGACTTTCTATATCCAAGTGAAGGAATCCATCGACGATGGGAGAGTGGTTACCGGATTACATCTATGGCTGCTACTACTGATCAGGCAGCCTTCATACTG AGCATCCCGAAACGTAAATTACTTGATGAAACTCAAGAGACTCTGAGGACATCTGCCTTCCCTAGCACCCATGTAAAGGTGTTTCCATTTCTTGTGTTTT GTCCTATTTACTTGTTGGCATCATGTAGTTTTAGCATGCCTTTGGTGTTAATATTAATCCTTCTTTTTGTTTGATCATTTGTTAGTTTTATCAGAGAATC AGTTGATAATTCATTGATAAAAGGAGTTCTAAAAGAAAAATCCAAAATTACTACAAAGTTATAGATTTATATTTTTTTTTAAATTGAAGACTTTGACCCA TTTTTATATATTCTAAAGTATGTGATGTAGAGAAGGGCCCAAAAGGTAGTCTTTTTTCTCATAGGTTTTTCCTCACAAGATATTAATTTTTAACTTGATG ATTTTGCAGGAAAAATGGTCCAAGAATCTATATATTGCTTCAATATGTTATGGGCGAACTGTTTGTTAGCTTCTGCCATGCACATTTGCAACATTCTTTA CTAAGTCAAAATTAGAAATGAGAGGGTTTTATATGATCATTTAGTTGAGTGGGTAGGTTTGCTTTTGACCCAAACCTACTTAACAGTAAAATCCCTAAAA AAATTGGTTGTAATTAGAAGGAAAGAAATTAAAAAGTAAAGGAGAAATAGAAGTAAGCTATGTTGTGAGAGGCATTTTCCTCAACCAACCTGAGCCAATG GCAACAACAATTTGTTCAAGAGTACTATCAATATGAATGGAAAGTCTCTGGCTATTTTGGCCATGTTTCATGGTTGTGCTTTTAAACCATTTGCGATGTT GTATGTAATAATGAAATTTAAGGTACAATGATTTCTATATTCCAAGACCAATTCATACCGGTCCTGAACTATGGCTGTCAATAAGATTTATGCGACATAA TAATCAATTGGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_194492; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_462838
| Blastp | Casein kinase 1-like protein HD16 from Oryza sativa with 86.98% of identity |
|---|---|
| Blastx | Casein kinase 1-like protein HD16 from Oryza sativa with 86.44% of identity |
| Eggnog | Casein Kinase(ENOG410XPGP) |
| Kegg | Link to kegg annotations (4334396) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458465.1) |
| Pfam | Protein kinase domain (PF00069.24) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |