Ll_transcript_465550

• Id Trinity: TRINITY_DN52667_c1_g1_i4
• Name Transcript: Ll_transcript_465550
• Sequence: TCAAAGAAGCTAAGAGTTTGTTAGCTGTGATGATAAAAGGTTGTGTGGAACCTGATGTTGTTACTTATAATTCTTTAATGGATGGTTACTGCTTAGTCAA TGAAGTGAGCAAGGGAAAACATTTATTCAGCACTATGTCTCAAATGGGAGTGACTCCCAATGTTCAAAGCTATAGTATAATAATTAAAGGGTTATGTGAG CTTAAAATGGTGGATGAAGCCATGAATCTCTTTAAGGAAATGCAGTGCAAAAGTATGACCCCTAATACTGTAACTTACAGTTCTCTTATTGATGGTTTTT GCAAGTCAGGGAGAATATCTCACGCATGGAAGCTTCTTGACGAGATGCATGATCGGGGTCAACCTGCGGATGTTATTACTTACAATTCCTTATTAGATGC TTTATGCAAAAACCAACAGCTTGACGAGGCAACTGCGTTACTCAAGAAAATTGAAGACCAGAGAATTCAGCCAAGTGTGTACACCTACATTGTACTTATT CGCGGATTATGCAATGTTGGTAGAGTTGAAACTGCAAAACAAGTTTTTCAACATTTTTTGATTAAAGGGTATCACCCAAATGTTTGGATATGTAATGCTA TGATATGGGGGCTTTGTAAAGTGGACTCATTTGATCAAGCCTTGGCATTGAAGTCAAAAATGGCAGAAAATCATTGCCTCCCAGATGCTGTAACGTTTGA AACAATTATTCGAGCTCTGTTAGAAAAAAATAAGAATGAAGATGCAAAGAAGCTTCGCAGTGAAATGATAGCTAGAGGGCTACTGTAAGGGTAAATGGTC TCTTGTATCAATTTGTGGTTCTTTTACGAACCGGTTCCCTTTGAAGTGGATCAAATGTAAAAGGTTATTTTTCATTTTCCTTGTTGAATGTGTTGGAGTT ACTGAATGGATATAAAAACAACACTTGTTGGAAGGGGTAGCTACGCAATCCAAAAAATATTAGTTTCTTACCCATAGGATGAGGGGATATCCTTGGTTAT TAAAAAAAAACCATGTTAGACAAAACTTATGAAAGTTGATATTTAGAGTGTCCATGCTAATATGCAGTATTCTATGATGTTTGGTTTGAATTACTATTGG TTTTCTACTGCTATGGCCTAATAATGGCATCAAATATACCAGATGTTCAAATAGCCAGAAGACCAGTTCTGAGTATAATTTCTGTTGAGTACTATACAGC CCTATCATTACAGAAAAATTGTAATATTATCTTTGTATTCGAAGAGCATTACTCTCATTCTTCTACTCATTATCACTCACCTCCTCTATGGGCCAGAACA TGAAAATTACAAAATTTGGTGAATTTATTTTAACACCATCCCTTTATTGGAATTGTAATTCAGGTATTCTTCAGCAAATTACATTTCCTGATACATGTTT GCATAAGCAACAACACTATATATTCTCTTCGGTATTAGACTCTCCGATATTAGATAAATATCCTAACATGTAGTATAACATTTTTTAACGGAG
• Tissue: pods
• Gene name: LI_gene_194554;
• Additional information: details;

Expression of Ll_transcript_465550

FPKM

• PAB: 0.8
• PNAB: 7.1
• PS1: 5
• PS2: 3.7
• PS3: 5.8
• PW1: 4.2
• PW2: 3.7
• PW3: 2.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465550

• Blastp: Pentatricopeptide repeat-containing protein At3g22470, mitochondrial from Arabidopsis with 39.53% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g22470, mitochondrial from Arabidopsis with 41% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G22470)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413503.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;