Ll_transcript_465551

• Id Trinity: TRINITY_DN52667_c1_g1_i5
• Name Transcript: Ll_transcript_465551
• Sequence: CTGTTCCAACGTTGTTGTGATTGTCCCAAAAGTCATCATTCAAAAAAGACCTAATTTGAGTTCAGTGTGTTCCAAACACCGATTGCAAGAATCAAATGTA TCATTGTCAAAGGGAGAATATCTCACGCATGGAAGCTTCTTGACGAGATGCATGATCGGGGTCAACCTGCCAATGTTATTACTTACACTTCCTTATTAGA TGCTTTATGCAAAAATAAGGAGCTTGACGAGGCATTTGCATTACTCAAAAAAATTGAAGACCAGGGAATTCAGCCAGATATGTACACATACACTGTACTT ATTCATGGATTATGCAATGTTGGTAGAGTTGAAACTGCAAAACAAGTTTTTCAACATTTTTTGATAAAAGGGTATCACCCAGATGTTCGGATATGTACTG TTATGATATGGGGGCTTTGTAAAGTGGACTCTTTTGATGAAGCATTGGCATTGAAGTCAAGAACGGAAG
• Tissue: pods
• Gene name: LI_gene_194554;
• Additional information: details;

Expression of Ll_transcript_465551

FPKM

• PAB: 0.9
• PNAB: 3.3
• PS1: 3.3
• PS2: 1.7
• PS3: 1.5
• PW1: 1.4
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465551

• Blastp: Pentatricopeptide repeat-containing protein At1g62670, mitochondrial from Arabidopsis with 39.22% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g46100 from Arabidopsis with 39.32% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G62670)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413117.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;