Ll_transcript_465552

• Id Trinity: TRINITY_DN52667_c1_g1_i6
• Name Transcript: Ll_transcript_465552
• Sequence: CCAAAACCCATCCCTTTCTCCCTGTATTGTGCAAAATGAAAAACCACTCATCCACGGGCTGATACAAACAACATAAACAGAGTAGTGTCTGATTAATAAA AAACTCAACAAACCTACATCTATTTCATTTTTCAAATTTTGAAGTCATACTTTTGTTCCTACGTTGTTGTTACTTTGCAAAGTCATCACTCATAAAACAC CTAATTTGACTTCAGTGTCTTCCCAACTACCATTACATGAATCAAATGTTTCAATGTCAAAGGTATTATTCTCTTTCTTTCTCAAAGTTTCATTCTTTCA TTCCTCATTTTCAATACCCTTCTTTCCTTCTTAGGTTTTTCTCTCTTTCTCTGAATCCTACTCATCTCAATAACCCTCTTAACCATGCTGTTCATTCCTT CAATAACATGCTTCATATGCGTAATAAACCACCCATCTTTCAATTTAATCAGATTTTAGGATCCATTGTGAAAATGAAGCATTACCCTATTGCTATTTCC CTTTTCAAACGATTTGAACCTATGACAATTATCCCTGATCTTTTTACTTTGAATATCTTACTCAATTGTTATTGCCATTTGGATCAAATGCCTTTTGCAT TCTCTGTATTGGCCAAGATTCACAAATTGGGTTATGAGCCAAATACTATAACCTTCACCACACTCATCAATGGGCTTTGTCTCAATGGTGATGTTAAGAA AGCTCTTCAATTTCATGACACTGTGTTAGGATATGGTTATGAGTTAAATGCAATTACTTATGGGACTTTGATCAAAGGGTTATGTAAAATAGGACAAACA GATGCTGCCACTCAGTTGTTGAGAAATATTGAATCCAAAGTGATGAAGCCGAATGTGGTCATGTACAACACTGTCATTGATAGTCTCTGCAAAGATAAAC TCATAGCTAGGGCCCTAGATCTATATTCCAAAATGGTTGTTACAGGAATTTCTCCTGATATTTTCACTTATAGTTCTCTAATGTATGGTTTGTGTATCGT GGGTCGATTGAAGGAAGCGACTGATTTGCTAAGTGATATGGTAATGAAAAACATCGACCCGAATATCTATACTTTCAACACATTGGTTGATGCATTTTTT AAGGAAGGAAGGGTCAAAGAAGCTAAGAGTTTGTTACCTGTGATGATAAAGGGTGGTGTGGAACCTGATGTTGTTACTTATAATTCTTTAATGGATGGTT ACTGCTTAGTCAATGAAGTGAGCAAGGGAAAACATTTATTCAGCACTATGCCTCAAAT
• Tissue: pods
• Gene name: LI_gene_194554;
• Additional information: details;

Expression of Ll_transcript_465552

FPKM

• PAB: 0
• PNAB: 1.3
• PS1: 0.7
• PS2: 0.4
• PS3: 0.6
• PW1: 0.9
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465552

• Blastp: Pentatricopeptide repeat-containing protein At1g62590 from Arabidopsis with 39.88% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g62590 from Arabidopsis with 39.94% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G62590)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413117.1)
• Pfam: PPR repeat family (PF13041.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;