Ll_transcript_463551

• Id Trinity: TRINITY_DN52668_c1_g1_i3
• Name Transcript: Ll_transcript_463551
• Sequence: AATTGAACAAAAGAAAATGCACACAACAAAATAATAACTGTTGAGAAAGGGAGAAGAGTGAGAAACACACTCAATTCACTTGCTTTCTCTCCATTACTAC TTTCACTCTCTTTTTGTCTCTGTTGCTCCGTTCCATTTCACGTTATTGCTTTCGTTCACTCACGTGATTTATATTGCCTCAATTTTCCGGATCAGTTTGT TAATATTAAGATGTGGTGTTGTTGCTGGTAGTTAGAAGCAGAGGAAAGTTCTGCCGCATTTGCATCTCGACAAGTCTCAGGCATCCTACACGGAGGATAA ATTGGCGTGTTGATGAAAATGTCCAAGTCTCCCTCTTCTCCTGAACAATGGCCGTCCATTTCTTCTAATCTTTCTCAGCCTAGGGAATTTAATGAGGCAA CAGGAATGGACGACCCAGAATCTACAATGGCGACAGTTGCTAATTTTGTAGAGCAGTTGCATACCAACTTGTCATCGGCACTTGAGAAAGAAATTATTAC TCAACGCTTGCTAGGTATTGCCAGGGAAAGAAAGGATGCTAGAACACTTATTGGTTCTCATACCCAAGCCATGCCGTTGTTCATAAACATTCTCAGAAAT GGGACTCCTCTTGCAAAAGTTAATGTTGCTGCCACTCTCAGTGTCCTGTGCAAAGATGAAGAACTAAGATTAAAAGTACTTCTTGGTGGTTGTATCCCAC CTTTACTGTCACTCTTAAAATATGAATCCACTGATGCCAGGAAGGCAGCAGCTGAAGCAATATATGACGTTTCCTCTGATGGTCTTTCACATGATCATGT TGGTATGAAGATTTTTGTTACAGAAGGTGTAGTTCCAACCTTATGGAATCAATTAAATCCAAATAAAAAGCAAGATAAAGTTGTGGAGGGTTTTATTACT GGAGCATTAAGAAATCTGTGTGGTGACAAAGATGGCTACTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATTATTGTGGGTCTCTTGTACTCGGACA ATGCTGTTTCTCAGTCAAATGCAGCTTCTCTATTGGCACGTTTAATGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGACTCTGGAGCAATCAAAGC TTTACTTCAGCTTGTTGGTCAGGAAAATCATATTTCTGTACGAGCTAGTGCTGCTGATGCCCTACAGGCCCTATCTTCAAAGTCAACTAAGGCCAAGGAA GCTATTGTTAGTGAAGATGGTCTACCGATACTTATTGGAGCTATAGTTGCTCCTTCTAAAGAGTGTATGCAAGGTGATGGTGGCCAGGCTCTGCAGGAGC ATGCAACTAGAGCATTATCCAATATCCGTGGTGGGATGTCTGCTTTAATACTATATCTTGGAAAACTTTCCTATTCTCCTCGCCTTTCTGTGCCAGTTGG TGATATAATTGGTGCTCTTGCTTATACACTCATGGTCTATGAGGAAAAAGTTGATGCTGACGTGGAACACTTGAATGCAACTAAGATAGAGGATACTCTA GTAACACTTTTAAAGCCTCAAGACAATATGCTGATTCAAGAACGTATCCTCGAGGCTATGGCTAGCCTATATGGTAACGTATGTCTCTCGAAGTGGCTCA ATCAGGCAGATTCAAAGAAGGTCCTTATTGGACTTATAACCATGGCTGCCACTGATGTGCAAGAATATCTTATACTTTCATTGACAAGCTTGTGTTGTGA TGGGGTAGGAATATGGGAGGCTATAAAAAAGAGAGAAGGTATCCAATTACTTATATCATTGCTGGGATTATCTAGTGAGCAGCATCAAGAGTACTCAGTT CAGTTGCTAGCAATCTTAACTCACCAGGTCGATGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGCTGTTGGAGACAGGAT CACAGAAAGCAAAAGAAGAAGCAGCTAATATCCTGTGGAGTTTGTGTTGTCACAGTGAAGATATTTGTGCATGTGTTGAAAGTGCTGGGGCCATCCCGGC ATTTTTGTGGCTGCTTAAGAGTGGTGGACCAAAAGGACAAGAAGCATCTTCTATGGCACTCACAAAGCTTGTCAGGTTAGCTGATTCTGCCACAATTAAT CAGCTATTAGCATTGCTTCTAGGGGAGTCTCCAAGCTCGAAGGCCCATATAATCCGAGTTTTAGGTCATGTACTTACCTTGTCTTCAGAAAACGATCTCC TGCAAAAGGGTTCTGCAGCTAATAAAGGCTTGAGATCTCTTGTCCAGGTTCTCAATTCATTGAATGAGGAAACCCAAGAGTATGCAGCCTCAGTCCTAGC TGATTTATTTATCATCAGACAAGACATTTGTGACAGCCTTGCAACTGACGAGGTTGTGCTTCCTTGCATGAAGCTTCTGACCAGCAAAACTCAAGCCGTT GCCACTCAGTCAGCTCGAGTGTTAAGTGCTTTGTCCCATCCAACTAAAAACAAAGCTGCAAATAAGATGTCTTATATTTTAGAGGGGGACATCAACCCAC TAATCAAGTTGGCTAAAACATCCTCTGTTGATGCTGCTGAAACTGCCGTTGCTGCATTGGCCAATCTTCTCTTTGATCCTTTTATTGCTGCCGAGGCTCT GGCTGAGGATGTCGTTTCAGCTATAACACGAGTTCTAGCAGAAGGAACCTTAGAAGGTAAGCAAAATGCATCTCGTGCGCTCCATCAATTATTGAAGCAT TTTGCTTTAGGTGAAATTCTCAAGGGGAATGCACAATGCCATTTCACTGTGCTTGCACTTGTTGATTCCTTAAGAGTCATGGATATGGATGGAACTGATA CTGCAAATGCTTTAGATGTAATTTCTTTGCTAGCAAGGACTAAACAGGGTGTCAACTTTACTTACCCTCCATGGTCGGTTCTAGCCGAATCGCCATCAAG CTTTGAACCCCTTATTCGCTGCCTCTCTGAGGGGCCTCCCCATGTTCAGGACAAGGCAATTGAAGTTCTGTCTAGGCTTTGTAGAGATCAGCCTGTTGTA CTTGGTGATTTGTTATCTGCTAGTTCTAGATCCATTGGTTCATTAGCTACAAGAATAATGAACTCCTCCAGTTTAGAAGTAAAAGTTGGAGGTGTTGCCT TACTAATTTGTGCTGCAAAGGAAAAGAAAGAGCTGTCAATGGATTCACTTGATGCTTCTGGGTTGCTAAAACCATTAATATGTTCTTTAGTTGATATGCT GAAACATAATTCTAGCCGCTCTTCATTAGAAATTGAAGTTCACCCTCCTAGCGGTTTTATGGAGAGAAATGCATTTCAAGAATTTGATGAATTTGATATT ATGGACCCAGCTATGGTGTTGGGAAGTAATGTAGCCTTGTGGTTGCTCTCAATTATTGCTTCTCTCCATATAAACAACAAACTTGAAATTATGGAAGCTG GTGGTCTCGAAGCTCTCTCTGACAAACTTGCAAGACACACTTCAAATCCACAGGTATACTAATTTAACCTTTCGGTTACTGCCATTTTTGTCTGTTCTCT CTGTCTTTTGGCTAGTTAGTTTACAACTTGGGTACTAATATCTCTATAGATAGGAAAATGACGTGCCAAATGTGCCATCTCAAACTGTGTATGTGCCATA CAAATTTGCAATGTAAACTGAATTATGAGTGAATCAAACTCTGGATAGAATAGAAGCAGAATTTCTGAAGAAATAAGAGCAATGACCAAAAACTATTCAG TTTTTCATTCAACATGTTTGATATATGGAGATGCATATTTAAAATAGGTGGATTGTTAAAGCCATTCCTAACAATTTAGTGAAAATAGGTAATTAGAAAG TTTTCACTGAAGAAAACTGGAATTTGAGATGACTGATTTTTAGCTGGAACTGAATTTAGGCTGGGCTTGTGAACAAAACAAAAGTTGCATGGGCTGAATC TGCAAAATATATCCGGTTTGAAAAATTCTTTTATTGACACGACTTTTATTTCTCAATATAAAAGTCTTATGTCATTTTCACATGTTCAGTGCCCCAAACT GTATTTTCCTTAAAGTACATTTTATGAAAAATCTTTTCTTTCCTTCTGAAAATCATTTTATTTTAATTCAAGCTATTAGAATATATGAAAGTATCTTAGA ATATCTT
• Tissue: pods
• Gene name: LI_gene_194556;
• Additional information: details;

Expression of Ll_transcript_463551

FPKM

• PAB: 0.4
• PNAB: 0
• PS1: 0.3
• PS2: 0.6
• PS3: 0.2
• PW1: 0
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_463551

• Blastp: Protein CELLULOSE SYNTHASE INTERACTIVE 3 from Arabidopsis with 64.76% of identity
• Blastx: Protein CELLULOSE SYNTHASE INTERACTIVE 3 from Arabidopsis with 64.76% of identity
• Eggnog: U-box domain-containing protein(ENOG410XRTN)
• Kegg: Link to kegg annotations (AT1G77460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455634.1)
• Pfam: Armadillo/beta-catenin-like repeat (PF00514.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;