| Id Trinity | TRINITY_DN52668_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_463554 |
| Sequence | AATTGAACAAAAGAAAATGCACACAACAAAATAATAACTGTTGAGAAAGGGAGAAGAGTGAGAAACACACTCAATTCACTTGCTTTCTCTCCATTACTAC TTTCACTCTCTTTTTGTCTCTGTTGCTCCGTTCCATTTCACGTTATTGCTTTCGTTCACTCACGTGATTTATATTGCCTCAATTTTCCGGATCAGTTTGT TAATATTAAGATGTGGTGTTGTTGCTGGTAGTTAGAAGCAGAGGAAAGTTCTGCCGCATTTGCATCTCGACAAGTCTCAGGCATCCTACACGGAGGATAA ATTGGCGTGTTGATGAAAATGTCCAAGTCTCCCTCTTCTCCTGAACAATGGCCGTCCATTTCTTCTAATCTTTCTCAGCCTAGGGAATTTAATGAGGCAA CAGGAATGGACGACCCAGAATCTACAATGGCGACAGTTGCTAATTTTGTAGAGCAGTTGCATACCAACTTGTCATCGGCACTTGAGAAAGAAATTATTAC TCAACGCTTGCTAGGTATTGCCAGGGAAAGAAAGGATGCTAGAACACTTATTGGTTCTCATACCCAAGCCATGCCGTTGTTCATAAACATTCTCAGAAAT GGGACTCCTCTTGCAAAAGTTAATGTTGCTGCCACTCTCAGTGTCCTGTGCAAAGATGAAGAACTAAGATTAAAAGTACTTCTTGGTGGTTGTATCCCAC CTTTACTGTCACTCTTAAAATATGAATCCACTGATGCCAGGAAGGCAGCAGCTGAAGCAATATATGACGTTTCCTCTGATGGTCTTTCACATGATCATGT TGGTATGAAGATTTTTGTTACAGAAGGTGTAGTTCCAACCTTATGGAATCAATTAAATCCAAATAAAAAGCAAGATAAAGTTGTGGAGGGTTTTATTACT GGAGCATTAAGAAATCTGTGTGGTGACAAAGATGGCTACTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATTATTGTGGGTCTCTTGTACTCGGACA ATGCTGTTTCTCAGTCAAATGCAGCTTCTCTATTGGCACGTTTAATGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGACTCTGGAGCAATCAAAGC TTTACTTCAGCTTGTTGGTCAGGAAAATCATATTTCTGTACGAGCTAGTGCTGCTGATGCCCTACAGGCCCTATCTTCAAAGTCAACTAAGGCCAAGGAA GCTATTGTTAGTGAAGATGGTCTACCGATACTTATTGGAGCTATAGTTGCTCCTTCTAAAGAGTGTATGCAAGGTGATGGTGGCCAGGCTCTGCAGGAGC ATGCAACTAGAGCATTATCCAATATCCGTGGTGGGATGTCTGCTTTAATACTATATCTTGGAAAACTTTCCTATTCTCCTCGCCTTTCTGTGCCAGTTGG TGATATAATTGGTGCTCTTGCTTATACACTCATGGTCTATGAGGAAAAAGTTGATGCTGACGTGGAACACTTGAATGCAACTAAGATAGAGGATACTCTA GTAACACTTTTAAAGCCTCAAGACAATATGCTGATTCAAGAACGTATCCTCGAGGCTATGGCTAGCCTATATGGTAACGTATGTCTCTCGAAGTGGCTCA ATCAGGCAGATTCAAAGAAGGTCCTTATTGGACTTATAACCATGGCTGCCACTGATGTGCAAGAATATCTTATACTTTCATTGACAAGCTTGTGTTGTGA TGGGGTAGGAATATGGGAGGCTATAAAAAAGAGAGAAGGTATCCAATTACTTATATCATTGCTGGGATTATCTAGTGAGCAGCATCAAGAGTACTCAGTT CAGTTGCTAGCAATCTTAACTCACCAGGTCGATGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGCTGTTGGAGACAGGAT CACAGAAAGCAAAAGAAGAAGCAGCTAATATCCTGTGGAGTTTGTGTTGTCACAGTGAAGATATTTGTGCATGTGTTGAAAGTGCTGGGGCCATCCCGGC ATTTTTGTGGCTGCTTAAGAGTGGTGGACCAAAAGGACAAGAAGCATCTTCTATGGCACTCACAAAGCTTGTCAGGTTAGCTGATTCTGCCACAATTAAT CAGCTATTAGCATTGCTCCTAGGGGATTCTCCAAACTCAAAGGCCCATATAATACGAGTTCTAGGTCATGTACTTACTATGGCTTCAGCAAAGGATCTCC TGCAAAAGGGTTCTGCAGCTAACAAAGGCTTGAGATCTCTTGTTCAGGTTCTCAGTTCATCGAATGAGGAAACCCAAGAATATGCAGCTTCCGTCCTCGC TGATTTATTTATCGTTAGACAAGACATTTGTGATAGTCTCACAATTGATGACGTTGTGCTTCCTTGCATGAAGCTTCTGACTAGTCAAACTCAAGTTGTT GCCACTCAGTCAGCTCGGGCGTTAAGTGCTCTATCCCGCCCAACCAAAAACAAATCTGCAAATAAGATGTCTTATATTGTAGAGGGGGATGTCGAGCCAC TGATCAAGTTGGCTAAAACATCCTCTGTTGATGCTGCTGAAACTGCTGTTGCTGCATTGGCTAATCTTCTATGTGATCCTCTTATTGCAGCTGAGGCTCT GGCTGAAGATATTGTTTCAGCTTTAATAAGAGTTCTAGCCAAAGGAACCTTCGAAGGTAAACAAAATGCATCTCGTGCGCTTCATCAATTATTGAAGCAT TTTCCAGTAGGTGAAGTTCTTAAGGGGAATGCACAATGCCATTTCACGGTGCTTGCACTTGTTGATTCCCTAAGAGACATGGATATGGATGGAACTGATG CAGAAGATGCTTTAGATGTAATTGCTTTGCTAGCCAGGACCAAACAGGGTGTCAACTTTACTTACCCCCCATGGTCGGCTCTGGCTGAAATACCATCAAG CTTTGAACCCCTTATCCGCTGCCTGTCTGAGGGCCCTCCCCTTGTGCAGGACAAGGCAGTTGAAGTTCTGTCTAGGCTTTGCAGAGATCAACCAGTCATA CTCGGTGATATGTTATCTGCTAGTTCCAGGTCCATTGGTTCATTAGCTACTAGAATAATGAGCTCCTCCAGTTTGGAAGTAAAAGTTGGTAGTGTTGCCT TACTAATTTGTGCTGCAAAGGAGAAGAAAGAGCTTTCAATGGATTTACTTGCTGCTTCTGGGTTTCTAAAACCATTAATATGTTCTTTAGTTGATATGAT GAAACAGAGTTCTAGCTGCTCTTCGTTAGAAATTGAGGCTCACGCTGCTAGAGGTTTTATGGAGAGAAATGCATTTCAAGAATTTGATGAGTTTGATATT CCTGATCCGGCTACGGTATTGGGAAGTAATGCTGCCATGTGGTTGCTCTCAATTATTGCTTCTTTCCATGTAAGCAACAAACTCGGAATTATGGAAGCTA GCGGTCTCGAAGCTCTCTCCAGCAAACTTGCAAGACATACTTCAAATCCACAGGCGGAATATGAGGACACAGAAGGAATATGGATCAATGCCTTGCTCTT GGCCATTTTATTTCAAGATGCAGATGTTGTTCTATCTCCTGCTACAATGCGCATTATACCTTCTCTGGCTCTTCTGCTAAGATCAGATGAAATGATTGAT AAGTATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTAATAAGGGAATAGATCTTGCCATTGCAAATTCTGGTGCTGTTGCTGGATTGATAG CTATTATTGGGCATATAGAGTCAGATATGCCAAACCTGACAGGTTTATCCGAAGAGTTCTCTTTGGTACGAAGCCCTGATCAAGTTGTTTTGGCTCATCT TTTCGAAATTGAAGATGTAAGAGTGGGATCTACTGCAAGGAAATCAATACCACTGTTGGTGGATCTCTTGAGACCAATAGCAGAAAGGCCTAGTGCTCCA CCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_194556; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_463554
| Blastp | Protein CELLULOSE SYNTHASE INTERACTIVE 3 from Arabidopsis with 65.58% of identity |
|---|---|
| Blastx | Protein CELLULOSE SYNTHASE INTERACTIVE 3 from Arabidopsis with 65.58% of identity |
| Eggnog | U-box domain-containing protein(ENOG410XRTN) |
| Kegg | Link to kegg annotations (AT1G77460) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460552.1) |
| Pfam | Armadillo/beta-catenin-like repeat (PF00514.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |