| Id Trinity | TRINITY_DN52672_c1_g2_i8 |
|---|---|
| Name Transcript | Ll_transcript_465280 |
| Sequence | AAATACTTTCTAACCTGGGAAAGTGTTGATGGTTGGCCGAGGAACTTTAAGTTCTCATTTGAGAAGTGTACTTATTACTTTGAGATAGCTGTAGCTTTGG CCGTGGCTGCTATTCCGGAAGGTTTGCCTGCAGTGATCACAACTTGCTTGGCGCTTGGTACGCGCAAGATGGCGCAGAAGAATGCGCTGGTTCGGAAACT GCCAAGTGTGGAAACTCTGGGTTGTACCACTGTCATTTGTTCAGATAAAACTGGTACATTGACTACAAACCAGATGTCAGTGACGAAATTGGTAGCTATT GGGACTAATGTAGATACACTGCGAGCCTTCAAGGTGGAAGGAACTACCTACAATCCTGCTGATGGTAGAATAGAGAACTGGCCGGCAGGGAAATTGGATG CAAATCTTGAGATGATAGCAAAAATTGCTGCGATTTGTAATGATGCTGGAGTCACACAGGCGGAGCATAAGTTTGTTGCCCATGGAATGCCAACTGAAGC AGCATTGAAGGTTTTGGTAGAGAAGATGGGCCTTCCCGGAGGATCCAAGGATGTACCATCAGCAAGTACACATAGTGTGCTACGTTGTAGTGAATGGTGG AATAAACATGACCCGAGGATTGCCACTCTTGAGTTTGACCGTGATAGGAAGTCAATGGGTGTTATTGTTGACTCTAGTCTGGGGGAAAAGTCGCTGCTGG TTAAGGGTGCTGTTGAAAACTTGTTAGAAAGAAGCTCCAAAATTCAGTGGCGTGATGGTTCTATTGTGAACCTGGACAATAATGCTAAGAACCTCGTCTT GCAAGCTCTCAATGAAATGTCAACTAGTGCATTGCGCTGTTTGGGATTTGCATACAAGGATGAGCTCCCTGACTTCAAAAACTACAGTGGTAATGACGAT CATCCAGCTCACCAGCTTTTGCTTAATCCTTCCAACTATTCTTCAATAGAAAGTGATCTCATTTTTGTTGGTTTGGTTGGGTTGAGGGATCCTCCTAGGG CGGAGGTATACCAAGCAATTGAAGACTGCAGAGCAGCTGGAATTCGTGTTATGGTTATTACTGGAGACAATAAGAACACTGCAGAAGCTATATGCCATGA AATAGGTGTATTTGGACCAAATGAAGACATTAGTTCAAGAAGTTTAACTGGCAGAGATTTTATGGAACTGCGTGATAAAAAAGCCCATCTGAGACAGAGT GGTGGACTTTTATTTTCGAGGGCTGAACCTAGGCACAAGCAAGAAATTGTGAGGCTGCTGAAAGATGATGGAGAGGTGGTGGCCATGACTGGAGATGGTG TTAATGATGCACCTGCCTTAAAGCTTGCCGACATTGGTATTGCAATGGGCATTGCAGGGACAGAGGTGGCCAAGGAAGCTTCAGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_194588; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465280
| Blastp | Calcium-transporting ATPase 4, endoplasmic reticulum-type from Arabidopsis with 77.06% of identity |
|---|---|
| Blastx | Calcium-transporting ATPase 4, endoplasmic reticulum-type from Arabidopsis with 77.06% of identity |
| Eggnog | P-type atpase(COG0474) |
| Kegg | Link to kegg annotations (AT1G07670) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456196.1) |
| Pfam | E1-E2 ATPase (PF00122.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |