Ll_transcript_465282

• Id Trinity: TRINITY_DN52672_c1_g2_i9
• Name Transcript: Ll_transcript_465282
• Sequence: TTTTCTAATCTCTTCATTATTCTTCATTACGCATTGTGATAGTGAAAGAAATAGATTCATATCTTAACTCTCTCAAACACATTTTCGCTTTACTTTCCCG ATCTTACGCTAACCGTTTTGGTGAAAAGCTTCGTATTATTCATACGGAACTCGTAGTTAGGTTTTGATGTTAGAAAAACGGAATCGAATAGAAACACTGA TTCTACTATTTTAAGTTCCATAAACTTTGGAGAAACAATTTTATTTATTCCAAATTGATTTCTCCAGGTTTATTTTTCCCCGATCTGAATGGAGAACGCG AATTCTGAGAATTCGGATCGTGAAATCTTCAAAGCTTGGTCGAAAGAAGTTGCGGAATGTGAACAACACTATAAGGTGAGTGCGCAAACTGGATTGAGCA GTGAAGAAGTTGAGAATCGGCGACGGATCTATGGATTCAATGAATTGGAGAAGCATGATGGCCAATCGATTTGGAAATTGGTTCTGGAACAGTTCAATGA CACGCTTGTGCGGATTTTACTCGCTGCTGCGATAATCTCATTTGTGCTCGCGTGGTACGACGGAGATGAAGGCGGTGAGATGGAGATAACCGCTTTTGTG GAGCCGTTGGTGATTTTCTTGATTTTAATTGTCAACGCCATTGTTGGAGTGTGGCAAGAGAGCAATGCGGAGAAGGCGCTTGAAGCGTTGAAGGAGATTC AGTCGGAGCACGCTACTGTTATTCGAGATAACGAGAAAATTTCGGATTTACCGGCAAAGGAATTAGTTCCTGGTGATATTGTTGAGCTTAAGGTTGGTGA TAAGGTTCCTGCAGATATGCGCGTTGTAAGGTTGATTAGTTCTACTTTGAGGTTAGAGCAGGGATCGTTAACCGGAGAGAGTGAAGCTGTGAATAAAACT AACAAGCCTGTTCCTGAAGATACTGATATTCAAGGGAAGAGTTGTATTGTTTTCGCGGGGACTACAGTTGTTAATGGGAACTGCATTTGCTTGGTTACTC AAATTGGGATGGATACTGAGATTGGGAAGGTGCATAATCAGATACACGAGGCTTCACAGAGCGAGGAGGATACACCATTGAAGAAGAAGCTGAACGAATT CGGAGAGAGACTGACTATGATAATTGGATTGATATGCATATTGGTTTGGCTAATCAATGTTAAATACTTTCTAACCTGGGAAATTGTTGATGGTTGGCCG AGGAACTTTAAGTTCTCATTTGAGAAGTGTACTTATTACTTTGAGATAGCTGTAGCTTTGGCCGTGGCTGCTATTCCGGAAGGTTTGCCTGCAGTGATCA CAACTTGCTTGGCGCTTGGTACGCGCAAGATGGCGCAGAAGAATGCGCTGGTTCGGAAACTGCCAAGTGTGGAAACTCTGGGTTGTACCACTGTCATTTG TTCAGATAAAACTGGTACATTGACTACAAACCAGATGTCAGTGACGAAATTGGTAGCTATTGGGACTAATGTAGATACACTGCGAGCCTTCAAGGTGGAA GGAACTACCTACAATCCTGCTGATGGTAGAATAGAGAACTGGCCGGCAGGGAAATTGGATGCAAATCTTGAGATGATAGCAAAAATTGCTGCGATTTGTA ATGATGCTGGAGTCACACAGGCGGAGCATAAGTTTGTTGCCCATGGAATGCCAACTGAAGCAGCATTGAAGGTTTTGGTAGAGAAGATGGGCCTTCCCGG AGGATCCAAGGATGTACCATCAGCAAGTACACATAGTGTGCTACGTTGTAGTGAATGGTGGAATAAACATGACCCGAGGATTGCCACTCTTGAGTTTGAC CGTGATAGGAAGTCAATGGGTGTTATTGTTGACTCTAGTCTGGGGGAAAAGTCGCTGCTGGTTAAGGGTGCTGTTGAAAACTTGTTAGAAAGAAGCTCCA AAATTCAGTGGCGTGATGGTTCTATTGTGAACCTGGACAATAATGCTAAGAACCTCGTCTTGCAAGCTCTCAATGAAATGTCAACTAGTGCATTGCGCTG TTTGGGATTTGCATACAAGGATGAGCTCCCTGACTTCAAAAACTACAGTGGTAATGACGATCATCCAGCTCACCAGCTTTTGCTTAATCCTTCCAACTAT TCTTCAATAGAAAGTGATCTCATTTTTGTTGGTTTGGTTGGGTTGAGGGATCCTCCTAGGGCGGAGGTATACCAAGCAATTGAAGACTGCAGAGGTGCTG GAATTCGTGTTATGGTTATTACCGGAGATAACAAGAACACTGCAGAAGCTATATGCCATGAAATAGGTGTATTTGGACCCAATGAAGACATTAGCTCGAA AAGTTTAACTGGCAAAGATTTTATGGAACTGAGTGATAAAAAAGCCCATCTGAGGCAAACTGGTGGACTTTTGTTTTCAAGGGCTGAACCTAGGCACAAG CAAGAAATAGTGAGGCTACTCAAAGATGATGGAGAGGTGGTGGCCATGACTGGAGATGGTGTTAATGATGCACCTGCCTTAAAGCTTGCTGATATTGGCA TCGCAATGGGAATTGCAGGGACTGAGGTGGCAAAGGAATCTTCCGATATGGTGTTAGCTGATGATAATTTTAGTACAATTGTTGCTGCTGTTGGTGAAGG TAGATCTATTTACAATAATATGAAGGCTTTTATCAGGTACATGATCTCTTCCAACATGGGAGAGGTTGCTTCTATATTTCTAACGGCTGC
• Tissue: pods
• Gene name: LI_gene_194588;
• Additional information: details;

Expression of Ll_transcript_465282

FPKM

• PAB: 3.6
• PNAB: 11.2
• PS1: 14.7
• PS2: 5.6
• PS3: 9.5
• PW1: 4.7
• PW2: 4.6
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_465282

• Blastp: Calcium-transporting ATPase 1, endoplasmic reticulum-type from Arabidopsis with 78.85% of identity
• Blastx: Calcium-transporting ATPase 1, endoplasmic reticulum-type from Arabidopsis with 78.85% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (AT1G07810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444380.1)
• Pfam: Cation transporter/ATPase, N-terminus (PF00690.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;