| Id Trinity | TRINITY_DN52676_c2_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_465222 |
| Sequence | CTATGCCACAGTTTCAACGAGCGCACTTGCAGCAGCAGCAACAACAGCAACAACAACAACAACAGGTGCAACTGAGGCAGCAATTTCAGCAACAAGCAAT GCATCCCTCATCTGCTGTGAAGCGCCCATTTGATAATGATGTTAGTGGTGTATGTTCCCGTCGATTGATGCAGTATCTCTATCATCAACGACAACGGCCA AATGATAATAGTATTGCGTATTGGAGAAAATTTGTAAGTGAGTATTACTCTCCCCGTGCAAAGAAGCGATGGTGCTTGTCATTATATAATAATGTTGGAC AGCATGCACTTGGTGTTTTTCCTCAAGCTGCTATGGTCAGTTTTTGCACTCGAACTTTCTGTTTTTGTTTCATAAATATGGTGGTGCCTTAATCTATGTT ATGAACACTGTGCTATGCACTGTTACACAGCGTTGTGAACTCCAGCCGCTACAGAAATGTAATAGCAGAGCTCTTCGGCTTCATGGGTGTTATGTACCTG TTATTTATTTCCACCTCCACCCCCCAAATTGCAGTGCAGCAATGAACGAGGGCTGAAAAACCCCAAGAGGCTGCTTCACTTTTGAGCCTCCACACGGGCT CTATATTTGGCCCATGGTGTCTGCACAACCAGAATGAAAACACCCTTTCTTGTTCATGTTTATTTAATTTACTTCCAAATGGTGTGTTTCATCTGTGGCG GAGCTTTAAGAATAAGTTACCGTGAATTTTGCATTTCGTCACTCTAGAATCTGTATTCCAAACCCCATCCATTTAGTTTTAGCCAAATTGCACATTTTCT AAAAAAAACAGTAGTGCAATATATACTTTCTGACAAAAAAAGTCACTGCCAAGGTTCAAACGTGAGTCCCAAAGTTGGAATGAGTATCAGGAGACAACTA GGGTAAAGGATCCATAATTAATATTACGCTATAACATTATACACAAACGAATACATGTATATATTAAAAAGTTTGGGGGAGCCATTACTCACCTGTCCTC GAGAAGTTCCACACCTAGGGTGGAAAGCCCCTAGAGTTGCTGCACTTTTGAGACTTCACACAGGTTCTAAGGTCGGCTCATGATGAGTCAGACAACCAGA AGACAAACACCCCTTTCATGTCACTTTTGCTTTAATTCACTTCCAAAAGGTGCATTTTAAACAGGTTTTTTTTTTATGTTGAATGTTCTGCTTTCCGTTT GCCTTACTTTATCTTATATTTACATAATTTCTTTTTTCTAATTAAACAACTCAACTATTAATCATACAATAACATAATATTTATCATAATTCATTTGAAA TGTTAGTCTGTAATATGATTAATCAAGACTATCATATAAATTCACATTAATATATAATATAAAATAATAAAATATTTGTATATTGTTTATCTTATGTGTA AAAACTTCTGCAAGGCTGCTATCTCACTAGCCAGATCCACTATACTGCTTCTGGGGTTGGCTGGTCTGTGCATGATTGATAACTATGACCTTAATATTTG TTGATGATCAGTCATGTATTTGAAGTGTTGGTATATTCCATTAGCCTATCATGTTATTGACCTCAACTCCTTAGAATGACCCTCAATACAAAAGTTACGT CTGAATTAATTGCATTTGCTTAGAATGCCCCTCAACTTTATGTCTGCACTGTATAGCTCATTTAATTTATGCTGCTTCTGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_194630; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_465222
| Blastp | Probable transcriptional regulator SLK2 from Arabidopsis with 74.29% of identity |
|---|---|
| Blastx | Probable transcriptional regulator SLK2 from Arabidopsis with 74.29% of identity |
| Eggnog | NA(ENOG41126CV) |
| Kegg | Link to kegg annotations (AT5G62090) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431316.1) |
| Pfam | LIM-domain binding protein (PF01803.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |